RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 SOS2Q07890 1332 aaPredicted RBP21.45■■□□□ 1.02
SMARCE1-204ENST00000400122 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
SMARCE1-204ENST00000400122 YTHDC2Q9H6S0 1430 aaKnown RBP21.41■■□□□ 1.02
SMARCE1-204ENST00000400122 PNPLA6Q8IY17 1366 aa21.41■■□□□ 1.02
SMARCE1-204ENST00000400122 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
SMARCE1-204ENST00000400122 CDK12Q9NYV4 1490 aaPredicted RBP21.38■■□□□ 1.01
SMARCE1-204ENST00000400122 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
SMARCE1-204ENST00000400122 NPHP3Q7Z494 1330 aa21.37■■□□□ 1.01
SMARCE1-204ENST00000400122 COL22A1Q8NFW1 1626 aaPredicted RBP21.37■■□□□ 1.01
SMARCE1-204ENST00000400122 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
SMARCE1-204ENST00000400122 ORAI2Q96SN7 254 aa21.36■■□□□ 1.01
SMARCE1-204ENST00000400122 FMN2Q9NZ56 1722 aa21.34■■□□□ 1.01
SMARCE1-204ENST00000400122 KIF1AQ12756 1690 aa21.33■■□□□ 1
SMARCE1-204ENST00000400122 TMEM132EQ6IEE7 984 aa21.32■■□□□ 1
SMARCE1-204ENST00000400122 WAPLQ7Z5K2 1190 aa21.32■■□□□ 1
SMARCE1-204ENST00000400122 PXDNQ92626 1479 aa21.32■■□□□ 1
SMARCE1-204ENST00000400122 STK26Q9P289 416 aa21.31■■□□□ 1
SMARCE1-204ENST00000400122 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
SMARCE1-204ENST00000400122 ADGRB1O14514 1584 aa21.3■■□□□ 1
SMARCE1-204ENST00000400122 ESCO1Q5FWF5 840 aa21.29■■□□□ 1
SMARCE1-204ENST00000400122 CFAP70Q5T0N1 1121 aa21.29■■□□□ 1
SMARCE1-204ENST00000400122 AFF2P51816 1311 aa21.29■■□□□ 1
SMARCE1-204ENST00000400122 PLEKHH1Q9ULM0 1364 aa21.28■■□□□ 1
SMARCE1-204ENST00000400122 NUTM2BA6NNL0 878 aaPredicted RBP21.28■■□□□ 1
SMARCE1-204ENST00000400122 NUTM2EB1AL46 878 aaPredicted RBP21.28■■□□□ 1
SMARCE1-204ENST00000400122 RXRBP28702 533 aa21.28■■□□□ 1
SMARCE1-204ENST00000400122 NUTM2AQ8IVF1 878 aaPredicted RBP21.28■■□□□ 1
SMARCE1-204ENST00000400122 ADGRB2O60241 1585 aa21.27■■□□□ 1
SMARCE1-204ENST00000400122 ANKARQ7Z5J8 1434 aa21.25■□□□□ 0.99
SMARCE1-204ENST00000400122 FNBP4Q8N3X1 1017 aaPredicted RBP21.25■□□□□ 0.99
SMARCE1-204ENST00000400122 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
SMARCE1-204ENST00000400122 FOXO3O43524 673 aa21.23■□□□□ 0.99
SMARCE1-204ENST00000400122 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
SMARCE1-204ENST00000400122 EIF3AQ14152 1382 aaKnown RBP21.22■□□□□ 0.99
SMARCE1-204ENST00000400122 C8orf37Q96NL8 207 aa21.21■□□□□ 0.99
SMARCE1-204ENST00000400122 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
SMARCE1-204ENST00000400122 NGLY1Q96IV0 654 aa21.2■□□□□ 0.98
SMARCE1-204ENST00000400122 PRAM1Q96QH2 718 aa21.2■□□□□ 0.98
SMARCE1-204ENST00000400122 SPATA31A3Q5VYP0 1347 aa21.2■□□□□ 0.98
SMARCE1-204ENST00000400122 KIAA1210Q9ULL0 1709 aa21.2■□□□□ 0.98
SMARCE1-204ENST00000400122 RGPD8O14715 1765 aaPredicted RBP21.2■□□□□ 0.98
SMARCE1-204ENST00000400122 QTRT2Q9H974 415 aaKnown RBP21.19■□□□□ 0.98
SMARCE1-204ENST00000400122 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
SMARCE1-204ENST00000400122 PSME1Q06323 249 aa21.17■□□□□ 0.98
SMARCE1-204ENST00000400122 POGKQ9P215 609 aa21.17■□□□□ 0.98
SMARCE1-204ENST00000400122 TRPC5Q9UL62 973 aaPredicted RBP21.17■□□□□ 0.98
SMARCE1-204ENST00000400122 PHF8Q9UPP1 1060 aa21.17■□□□□ 0.98
SMARCE1-204ENST00000400122 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.15■□□□□ 0.98
SMARCE1-204ENST00000400122 ADAMTS2O95450 1211 aa21.15■□□□□ 0.98
SMARCE1-204ENST00000400122 ATRNO75882 1429 aa21.14■□□□□ 0.98
SMARCE1-204ENST00000400122 KRT28Q7Z3Y7 464 aa21.14■□□□□ 0.97
SMARCE1-204ENST00000400122 USP21Q9UK80 565 aa21.14■□□□□ 0.97
SMARCE1-204ENST00000400122 USP32Q8NFA0 1604 aa21.14■□□□□ 0.97
SMARCE1-204ENST00000400122 TNS3Q68CZ2 1445 aa21.13■□□□□ 0.97
SMARCE1-204ENST00000400122 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
SMARCE1-204ENST00000400122 UPF1Q92900 1129 aaKnown RBP eCLIP21.13■□□□□ 0.97
SMARCE1-204ENST00000400122 TULP4Q9NRJ4 1543 aa21.13■□□□□ 0.97
SMARCE1-204ENST00000400122 NUTM2FA1L443 756 aa21.12■□□□□ 0.97
SMARCE1-204ENST00000400122 BCL9LQ86UU0 1499 aa21.12■□□□□ 0.97
SMARCE1-204ENST00000400122 ARHGEF28Q8N1W1 1705 aaKnown RBP21.12■□□□□ 0.97
SMARCE1-204ENST00000400122 RGS12O14924 1447 aa21.12■□□□□ 0.97
SMARCE1-204ENST00000400122 TRAK1Q9UPV9 953 aa21.11■□□□□ 0.97
SMARCE1-204ENST00000400122 KDM2AQ9Y2K7 1162 aa21.11■□□□□ 0.97
SMARCE1-204ENST00000400122 SLIT2O94813 1529 aa21.09■□□□□ 0.97
SMARCE1-204ENST00000400122 WASLO00401 505 aaPredicted RBP21.09■□□□□ 0.97
SMARCE1-204ENST00000400122 XPCQ01831 940 aaPredicted RBP21.08■□□□□ 0.97
SMARCE1-204ENST00000400122 ITSN1Q15811 1721 aa21.07■□□□□ 0.96
SMARCE1-204ENST00000400122 TRPM3Q9HCF6 1732 aaPredicted RBP21.07■□□□□ 0.96
SMARCE1-204ENST00000400122 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
SMARCE1-204ENST00000400122 SAFB2Q14151 953 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMARCE1-204ENST00000400122 EP400Q96L91 3159 aa21.05■□□□□ 0.96
SMARCE1-204ENST00000400122 GPRASP1Q5JY77 1395 aa21.05■□□□□ 0.96
SMARCE1-204ENST00000400122 ALS2Q96Q42 1657 aa21.05■□□□□ 0.96
SMARCE1-204ENST00000400122 ABCA3Q99758 1704 aa21.04■□□□□ 0.96
SMARCE1-204ENST00000400122 ATAD2Q6PL18 1390 aa21.03■□□□□ 0.96
SMARCE1-204ENST00000400122 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
SMARCE1-204ENST00000400122 GJD4Q96KN9 370 aaPredicted RBP21.03■□□□□ 0.96
SMARCE1-204ENST00000400122 MINK1Q8N4C8 1332 aaPredicted RBP21.03■□□□□ 0.96
SMARCE1-204ENST00000400122 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
SMARCE1-204ENST00000400122 ATP7BP35670 1465 aa21.01■□□□□ 0.95
SMARCE1-204ENST00000400122 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
SMARCE1-204ENST00000400122 CCDC125Q86Z20 511 aa20.98■□□□□ 0.95
SMARCE1-204ENST00000400122 PMFBP1Q8TBY8 1022 aa20.98■□□□□ 0.95
SMARCE1-204ENST00000400122 POLR3AO14802 1390 aaPredicted RBP20.97■□□□□ 0.95
SMARCE1-204ENST00000400122 TOPAZ1Q8N9V7 1692 aa20.97■□□□□ 0.95
SMARCE1-204ENST00000400122 ONECUT3O60422 494 aaPredicted RBP20.97■□□□□ 0.95
SMARCE1-204ENST00000400122 VPS72Q15906 364 aa20.97■□□□□ 0.95
SMARCE1-204ENST00000400122 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
SMARCE1-204ENST00000400122 NUDT16Q96DE0 195 aaKnown RBP20.96■□□□□ 0.95
SMARCE1-204ENST00000400122 CCDC61Q9Y6R9 512 aa20.96■□□□□ 0.95
SMARCE1-204ENST00000400122 CRYBG1Q9Y4K1 1723 aa20.95■□□□□ 0.94
SMARCE1-204ENST00000400122 RALGAPBQ86X10 1494 aa20.95■□□□□ 0.94
SMARCE1-204ENST00000400122 GLI3P10071 1580 aa20.95■□□□□ 0.94
SMARCE1-204ENST00000400122 PLEKHG3A1L390 1219 aa20.95■□□□□ 0.94
SMARCE1-204ENST00000400122 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
SMARCE1-204ENST00000400122 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
SMARCE1-204ENST00000400122 NGDNQ8NEJ9 315 aaKnown RBP20.94■□□□□ 0.94
SMARCE1-204ENST00000400122 COL14A1Q05707 1796 aaKnown RBP20.93■□□□□ 0.94
SMARCE1-204ENST00000400122 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
SMARCE1-204ENST00000400122 NBPF1Q3BBV0 1214 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms