RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 MAGEC2Q9UBF1 373 aaPredicted RBP13.99□□□□□ -0.17
HLCS-202ENST00000399120 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 ANKRD62A6NC57 917 aa13.98□□□□□ -0.17
HLCS-202ENST00000399120 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
HLCS-202ENST00000399120 FILIP1LQ4L180 1135 aa13.98□□□□□ -0.17
HLCS-202ENST00000399120 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
HLCS-202ENST00000399120 SEPT7Q16181 437 aaKnown RBP13.98□□□□□ -0.17
HLCS-202ENST00000399120 CCP110O43303 1012 aa13.98□□□□□ -0.17
HLCS-202ENST00000399120 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
HLCS-202ENST00000399120 FKBP5Q13451 457 aaPredicted RBP13.97□□□□□ -0.17
HLCS-202ENST00000399120 CDK5RAP3Q96JB5 506 aa13.97□□□□□ -0.17
HLCS-202ENST00000399120 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.17
HLCS-202ENST00000399120 PANK3Q9H999 370 aa13.96□□□□□ -0.17
HLCS-202ENST00000399120 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
HLCS-202ENST00000399120 SMC2O95347 1197 aa13.96□□□□□ -0.17
HLCS-202ENST00000399120 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.96□□□□□ -0.17
HLCS-202ENST00000399120 GOLGA6L10A6NI86 522 aa13.96□□□□□ -0.18
HLCS-202ENST00000399120 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.18
HLCS-202ENST00000399120 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.18
HLCS-202ENST00000399120 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
HLCS-202ENST00000399120 DZIP1LQ8IYY4 767 aaKnown RBP13.95□□□□□ -0.18
HLCS-202ENST00000399120 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
HLCS-202ENST00000399120 RAB3GAP2Q9H2M9 1393 aa13.95□□□□□ -0.18
HLCS-202ENST00000399120 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
HLCS-202ENST00000399120 NASPP49321 788 aaPredicted RBP13.95□□□□□ -0.18
HLCS-202ENST00000399120 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
HLCS-202ENST00000399120 PSMA5P28066 241 aa13.95□□□□□ -0.18
HLCS-202ENST00000399120 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
HLCS-202ENST00000399120 EVC2Q86UK5 1308 aa13.94□□□□□ -0.18
HLCS-202ENST00000399120 TXLNAP40222 546 aa13.94□□□□□ -0.18
HLCS-202ENST00000399120 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
HLCS-202ENST00000399120 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
HLCS-202ENST00000399120 FMN1Q68DA7 1419 aa13.94□□□□□ -0.18
HLCS-202ENST00000399120 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
HLCS-202ENST00000399120 L3MBTL2Q969R5 705 aa13.94□□□□□ -0.18
HLCS-202ENST00000399120 KDM4AO75164 1064 aa13.93□□□□□ -0.18
HLCS-202ENST00000399120 KRT18P05783 430 aaKnown RBP13.93□□□□□ -0.18
HLCS-202ENST00000399120 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
HLCS-202ENST00000399120 EZRP15311 586 aaKnown RBP13.93□□□□□ -0.18
HLCS-202ENST00000399120 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
HLCS-202ENST00000399120 CUX2O14529 1486 aa13.92□□□□□ -0.18
HLCS-202ENST00000399120 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
HLCS-202ENST00000399120 ZNHIT6Q9NWK9 470 aaKnown RBP13.92□□□□□ -0.18
HLCS-202ENST00000399120 RIC3Q7Z5B4 369 aa13.92□□□□□ -0.18
HLCS-202ENST00000399120 PDCL3Q9H2J4 239 aa13.92□□□□□ -0.18
HLCS-202ENST00000399120 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
HLCS-202ENST00000399120 MRE11P49959 708 aa13.91□□□□□ -0.18
HLCS-202ENST00000399120 RNF214Q8ND24 703 aa13.91□□□□□ -0.18
HLCS-202ENST00000399120 C22orf23Q9BZE7 217 aa13.91□□□□□ -0.18
HLCS-202ENST00000399120 RIPK4P57078 832 aa13.91□□□□□ -0.18
HLCS-202ENST00000399120 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
HLCS-202ENST00000399120 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
HLCS-202ENST00000399120 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.188e-6■■■■□ 21.3
HLCS-202ENST00000399120 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 CNTROBQ8N137 903 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 APAF1O14727 1248 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 LNPKQ9C0E8 428 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 INCENPQ9NQS7 918 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 SLC3A2P08195 630 aaKnown RBP13.89□□□□□ -0.19
HLCS-202ENST00000399120 TSPY26PQ9H489 355 aa13.89□□□□□ -0.19
HLCS-202ENST00000399120 RABEP1Q15276 862 aa13.88□□□□□ -0.19
HLCS-202ENST00000399120 CDC45O75419 566 aa13.88□□□□□ -0.19
HLCS-202ENST00000399120 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
HLCS-202ENST00000399120 TXLNBQ8N3L3 684 aa13.88□□□□□ -0.19
HLCS-202ENST00000399120 PSME1Q06323 249 aa13.87□□□□□ -0.19
HLCS-202ENST00000399120 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
HLCS-202ENST00000399120 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
HLCS-202ENST00000399120 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
HLCS-202ENST00000399120 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
HLCS-202ENST00000399120 WASHC2AQ641Q2 1341 aa13.87□□□□□ -0.19
HLCS-202ENST00000399120 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
HLCS-202ENST00000399120 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
HLCS-202ENST00000399120 MBD3O95983 291 aa13.86□□□□□ -0.19
HLCS-202ENST00000399120 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
HLCS-202ENST00000399120 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
HLCS-202ENST00000399120 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
HLCS-202ENST00000399120 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
HLCS-202ENST00000399120 PPFIBP1Q86W92 1011 aa13.86□□□□□ -0.19
HLCS-202ENST00000399120 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 GBP2P32456 591 aaPredicted RBP13.85□□□□□ -0.19
HLCS-202ENST00000399120 HMGN5P82970 282 aaKnown RBP13.85□□□□□ -0.19
HLCS-202ENST00000399120 DHX8Q14562 1220 aaKnown RBP13.85□□□□□ -0.19
HLCS-202ENST00000399120 CCDC97Q96F63 343 aaPredicted RBP13.85□□□□□ -0.19
HLCS-202ENST00000399120 ZBED9Q6R2W3 1325 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 SERPINC1P01008 464 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 CAVIN1Q6NZI2 390 aaKnown RBP13.85□□□□□ -0.19
HLCS-202ENST00000399120 GNAI1P63096 354 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 STIM1Q13586 685 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 CENPHQ9H3R5 247 aa13.85□□□□□ -0.19
HLCS-202ENST00000399120 CCDC144AA2RUR9 1427 aa13.84□□□□□ -0.19
HLCS-202ENST00000399120 EIF3JO75822 258 aaKnown RBP13.84□□□□□ -0.19
HLCS-202ENST00000399120 PDCP20941 246 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms