RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 CWC15Q9P013 229 aaKnown RBP10.43□□□□□ -0.74
CTNND1-205ENST00000399050 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 EIF2S2P20042 333 aaKnown RBP10.43□□□□□ -0.74
CTNND1-205ENST00000399050 GNAI1P63096 354 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 C9orf78Q9NZ63 289 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-205ENST00000399050 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 AK7Q96M32 723 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 NAT10Q9H0A0 1025 aaKnown RBP10.42□□□□□ -0.74
CTNND1-205ENST00000399050 MINK1Q8N4C8 1332 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-205ENST00000399050 K7ELQ4 463 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-205ENST00000399050 NCOA2Q15596 1464 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 IPO7O95373 1038 aaKnown RBP10.42□□□□□ -0.74
CTNND1-205ENST00000399050 CPLX1O14810 134 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 PRDM2Q13029 1718 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 ANKRD20A12PQ8NF67 263 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 FKBP5Q13451 457 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-205ENST00000399050 CADPSQ9ULU8 1353 aa10.42□□□□□ -0.74
CTNND1-205ENST00000399050 NEK4P51957 841 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 HSP90B2PQ58FF3 399 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
CTNND1-205ENST00000399050 MARCH6O60337 910 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 ZNF644Q9H582 1327 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-205ENST00000399050 RUFY1Q96T51 708 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 CWC22Q9HCG8 908 aaKnown RBP10.41□□□□□ -0.74
CTNND1-205ENST00000399050 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 PODXL2Q9NZ53 605 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 HMOX1P09601 288 aa10.41□□□□□ -0.74
CTNND1-205ENST00000399050 TCP11L2Q8N4U5 519 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 C1orf115Q9H7X2 142 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 NINLQ9Y2I6 1382 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 ERC2O15083 957 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 PDILTQ8N807 584 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 ARAP1Q96P48 1450 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 MCM2P49736 904 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 MPNDQ8N594 471 aa10.4□□□□□ -0.74
CTNND1-205ENST00000399050 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
CTNND1-205ENST00000399050 LRRFIP1Q32MZ4 808 aaKnown RBP10.4□□□□□ -0.75
CTNND1-205ENST00000399050 VGFO15240 615 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-205ENST00000399050 GCC1Q96CN9 775 aa10.39□□□□□ -0.75
CTNND1-205ENST00000399050 CASKIN1Q8WXD9 1431 aa10.39□□□□□ -0.75
CTNND1-205ENST00000399050 G3BP1Q13283 466 aaKnown RBP eCLIP10.39□□□□□ -0.758e-9■□□□□ 11.1
CTNND1-205ENST00000399050 C1orf141Q5JVX7 400 aa10.39□□□□□ -0.75
CTNND1-205ENST00000399050 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
CTNND1-205ENST00000399050 OLFM4Q6UX06 510 aa10.39□□□□□ -0.75
CTNND1-205ENST00000399050 IGF1RP08069 1367 aa10.39□□□□□ -0.75
CTNND1-205ENST00000399050 SMC2O95347 1197 aa10.39□□□□□ -0.75
CTNND1-205ENST00000399050 CALRP27797 417 aaKnown RBP10.39□□□□□ -0.75
CTNND1-205ENST00000399050 NBPF8Q3BBV2 869 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 FIBPO43427 364 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 CNTROBQ8N137 903 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 NEXNQ0ZGT2 675 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 PSMA5P28066 241 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 MTHFSP49914 203 aa10.38□□□□□ -0.75
CTNND1-205ENST00000399050 ERICH3Q5RHP9 1530 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 TEFQ10587 303 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 SDF4Q9BRK5 362 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 VPS53Q5VIR6 699 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 ZSCAN30Q86W11 494 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 CIZ1Q9ULV3 898 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-205ENST00000399050 APPP05067 770 aa10.37□□□□□ -0.75
CTNND1-205ENST00000399050 ANKRD50Q9ULJ7 1429 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 CCDC47Q96A33 483 aaKnown RBP10.36□□□□□ -0.75
CTNND1-205ENST00000399050 CCP110O43303 1012 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 LEKR1Q6ZMV7 388 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 CCDC192P0DO97 292 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 TRDNQ13061 729 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 SKAP1Q86WV1 359 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 ERCC4Q92889 916 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-205ENST00000399050 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
CTNND1-205ENST00000399050 MVPQ14764 893 aaKnown RBP10.36□□□□□ -0.75
CTNND1-205ENST00000399050 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
CTNND1-205ENST00000399050 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
CTNND1-205ENST00000399050 UBTFL1P0CB47 393 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-205ENST00000399050 TTLL5Q6EMB2 1281 aa10.35□□□□□ -0.75
CTNND1-205ENST00000399050 NAP1L1P55209 391 aaKnown RBP10.35□□□□□ -0.75
CTNND1-205ENST00000399050 CHD1LQ86WJ1 897 aa10.35□□□□□ -0.75
CTNND1-205ENST00000399050 CAGE1Q8TC20 777 aa10.35□□□□□ -0.75
CTNND1-205ENST00000399050 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
CTNND1-205ENST00000399050 FANCD2Q9BXW9 1451 aa10.34□□□□□ -0.75
CTNND1-205ENST00000399050 H0YHG0 523 aa10.34□□□□□ -0.75
CTNND1-205ENST00000399050 PRDM10Q9NQV6 1147 aa10.34□□□□□ -0.75
CTNND1-205ENST00000399050 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
CTNND1-205ENST00000399050 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
CTNND1-205ENST00000399050 EID1Q9Y6B2 187 aa10.34□□□□□ -0.75
CTNND1-205ENST00000399050 DDX58O95786 925 aaKnown RBP10.34□□□□□ -0.75
CTNND1-205ENST00000399050 TNMDQ9H2S6 317 aa10.34□□□□□ -0.75
CTNND1-205ENST00000399050 CDR1P51861 262 aa10.33□□□□□ -0.76
CTNND1-205ENST00000399050 CFTRP13569 1480 aa10.33□□□□□ -0.76
CTNND1-205ENST00000399050 SAFBQ15424 915 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTNND1-205ENST00000399050 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
CTNND1-205ENST00000399050 TIAM1Q13009 1591 aa10.33□□□□□ -0.76
CTNND1-205ENST00000399050 RDXP35241 583 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms