RNA–Protein interactions for RNA: ENST00000398733.7

UBE2D2-202, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2D2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-202ENST00000398733 ABCC1P33527 1531 aa22.99■■□□□ 1.27
UBE2D2-202ENST00000398733 TRAK1Q9UPV9 953 aa22.98■■□□□ 1.27
UBE2D2-202ENST00000398733 MTHFSP49914 203 aa22.98■■□□□ 1.27
UBE2D2-202ENST00000398733 MFAP1P55081 439 aaKnown RBP22.98■■□□□ 1.27
UBE2D2-202ENST00000398733 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
UBE2D2-202ENST00000398733 KANK1Q14678 1352 aa22.96■■□□□ 1.27
UBE2D2-202ENST00000398733 CHGAP10645 457 aaKnown RBP22.96■■□□□ 1.27
UBE2D2-202ENST00000398733 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
UBE2D2-202ENST00000398733 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
UBE2D2-202ENST00000398733 XRCC6P12956 609 aaKnown RBP eCLIP22.95■■□□□ 1.26
UBE2D2-202ENST00000398733 AAMPQ13685 434 aa22.95■■□□□ 1.26
UBE2D2-202ENST00000398733 GOLGA6L3A6NEY3 463 aa22.95■■□□□ 1.26
UBE2D2-202ENST00000398733 MCM4P33991 863 aa22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 MVPQ14764 893 aaKnown RBP22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 ABCA6Q8N139 1617 aa22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 UBE2Q2Q8WVN8 375 aa22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 PANK2Q9BZ23 570 aa22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 C22orf23Q9BZE7 217 aa22.94■■□□□ 1.26
UBE2D2-202ENST00000398733 TSR2Q969E8 191 aaKnown RBP22.92■■□□□ 1.26
UBE2D2-202ENST00000398733 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
UBE2D2-202ENST00000398733 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
UBE2D2-202ENST00000398733 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.261e-6■□□□□ 10.2
UBE2D2-202ENST00000398733 MAP3K4Q9Y6R4 1608 aa22.92■■□□□ 1.26
UBE2D2-202ENST00000398733 ZKSCAN2Q63HK3 967 aa22.91■■□□□ 1.26
UBE2D2-202ENST00000398733 DZIP1LQ8IYY4 767 aaKnown RBP22.91■■□□□ 1.26
UBE2D2-202ENST00000398733 MYH16Q9H6N6 1097 aa22.91■■□□□ 1.26
UBE2D2-202ENST00000398733 KIAA1210Q9ULL0 1709 aa22.9■■□□□ 1.26
UBE2D2-202ENST00000398733 ZFYVE16Q7Z3T8 1539 aa22.9■■□□□ 1.26
UBE2D2-202ENST00000398733 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
UBE2D2-202ENST00000398733 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
UBE2D2-202ENST00000398733 TET3O43151 1660 aa22.89■■□□□ 1.26
UBE2D2-202ENST00000398733 TMEM132EQ6IEE7 984 aa22.89■■□□□ 1.25
UBE2D2-202ENST00000398733 SHROOM2Q13796 1616 aa22.88■■□□□ 1.25
UBE2D2-202ENST00000398733 SMC4Q9NTJ3 1288 aa22.88■■□□□ 1.25
UBE2D2-202ENST00000398733 RTEL1-TNFRSF6BF6WH68 1400 aa22.87■■□□□ 1.25
UBE2D2-202ENST00000398733 TRAK2O60296 914 aa22.87■■□□□ 1.25
UBE2D2-202ENST00000398733 CHMP5Q9NZZ3 219 aa22.87■■□□□ 1.25
UBE2D2-202ENST00000398733 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
UBE2D2-202ENST00000398733 ITPRIPQ8IWB1 547 aa22.86■■□□□ 1.25
UBE2D2-202ENST00000398733 MYOM2P54296 1465 aa22.86■■□□□ 1.25
UBE2D2-202ENST00000398733 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
UBE2D2-202ENST00000398733 CHD1O14646 1710 aa22.86■■□□□ 1.25
UBE2D2-202ENST00000398733 FSD2A1L4K1 749 aa22.85■■□□□ 1.25
UBE2D2-202ENST00000398733 NOS1P29475 1434 aa22.85■■□□□ 1.25
UBE2D2-202ENST00000398733 EXOSC9Q06265 439 aaKnown RBP22.84■■□□□ 1.25
UBE2D2-202ENST00000398733 DEPDC5O75140 1603 aa22.83■■□□□ 1.25
UBE2D2-202ENST00000398733 TRIM27P14373 513 aa22.83■■□□□ 1.25
UBE2D2-202ENST00000398733 ZNF518AQ6AHZ1 1483 aa22.83■■□□□ 1.25
UBE2D2-202ENST00000398733 ZCCHC11Q5TAX3 1644 aaKnown RBP22.83■■□□□ 1.25
UBE2D2-202ENST00000398733 SBNO2Q9Y2G9 1366 aa22.83■■□□□ 1.25
UBE2D2-202ENST00000398733 HSCBQ8IWL3 235 aa22.82■■□□□ 1.24
UBE2D2-202ENST00000398733 U2SURPO15042 1029 aaKnown RBP22.81■■□□□ 1.24
UBE2D2-202ENST00000398733 SSH1Q8WYL5 1049 aa22.81■■□□□ 1.24
UBE2D2-202ENST00000398733 NAP1L5Q96NT1 182 aaPredicted RBP22.8■■□□□ 1.24
UBE2D2-202ENST00000398733 KIF1BO60333 1816 aa22.78■■□□□ 1.24
UBE2D2-202ENST00000398733 ATP7AQ04656 1500 aa22.78■■□□□ 1.24
UBE2D2-202ENST00000398733 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
UBE2D2-202ENST00000398733 PNNQ9H307 717 aaKnown RBP22.78■■□□□ 1.24
UBE2D2-202ENST00000398733 NOB1Q9ULX3 412 aaKnown RBP22.78■■□□□ 1.24
UBE2D2-202ENST00000398733 DDX19BQ9UMR2 479 aa22.78■■□□□ 1.24
UBE2D2-202ENST00000398733 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
UBE2D2-202ENST00000398733 VWDEQ8N2E2 1590 aa22.77■■□□□ 1.24
UBE2D2-202ENST00000398733 HDAC1Q13547 482 aaPredicted RBP22.77■■□□□ 1.24
UBE2D2-202ENST00000398733 ATF7IPQ6VMQ6 1270 aa22.77■■□□□ 1.24
UBE2D2-202ENST00000398733 MROH2AA6NES4 1674 aa22.77■■□□□ 1.23
UBE2D2-202ENST00000398733 SAFB2Q14151 953 aaKnown RBP eCLIP22.76■■□□□ 1.23
UBE2D2-202ENST00000398733 TMEM57Q8N5G2 664 aa22.76■■□□□ 1.23
UBE2D2-202ENST00000398733 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
UBE2D2-202ENST00000398733 LNPKQ9C0E8 428 aa22.75■■□□□ 1.23
UBE2D2-202ENST00000398733 MRE11P49959 708 aa22.74■■□□□ 1.23
UBE2D2-202ENST00000398733 C14orf93Q9H972 538 aaKnown RBP22.74■■□□□ 1.23
UBE2D2-202ENST00000398733 ZNF692Q9BU19 519 aaPredicted RBP22.74■■□□□ 1.23
UBE2D2-202ENST00000398733 CABP2Q9NPB3 220 aa22.73■■□□□ 1.23
UBE2D2-202ENST00000398733 SMC5Q8IY18 1101 aa22.73■■□□□ 1.23
UBE2D2-202ENST00000398733 GRPEL1Q9HAV7 217 aa22.73■■□□□ 1.23
UBE2D2-202ENST00000398733 DDX11L8A8MPP1 907 aa22.73■■□□□ 1.23
UBE2D2-202ENST00000398733 TMPOP42166 694 aaKnown RBP22.73■■□□□ 1.23
UBE2D2-202ENST00000398733 NEURL4Q96JN8 1562 aa22.72■■□□□ 1.23
UBE2D2-202ENST00000398733 FANCAO15360 1455 aa22.72■■□□□ 1.23
UBE2D2-202ENST00000398733 NRXN1Q9ULB1 1477 aa22.72■■□□□ 1.23
UBE2D2-202ENST00000398733 CLCN1P35523 988 aa22.72■■□□□ 1.23
UBE2D2-202ENST00000398733 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
UBE2D2-202ENST00000398733 QRICH2Q9H0J4 1663 aa22.72■■□□□ 1.23
UBE2D2-202ENST00000398733 FOXD4L1Q9NU39 408 aa22.71■■□□□ 1.23
UBE2D2-202ENST00000398733 IFT172Q9UG01 1749 aa22.71■■□□□ 1.23
UBE2D2-202ENST00000398733 CT47B1P0C2W7 299 aaPredicted RBP22.71■■□□□ 1.23
UBE2D2-202ENST00000398733 CFAP65Q6ZU64 1925 aaKnown RBP22.7■■□□□ 1.22
UBE2D2-202ENST00000398733 MROH1Q8NDA8 1641 aa22.7■■□□□ 1.22
UBE2D2-202ENST00000398733 GGNBP2Q9H3C7 697 aa22.7■■□□□ 1.22
UBE2D2-202ENST00000398733 CD109Q6YHK3 1445 aa22.69■■□□□ 1.22
UBE2D2-202ENST00000398733 TNPO1Q92973 898 aaKnown RBP22.69■■□□□ 1.22
UBE2D2-202ENST00000398733 ZBTB40Q9NUA8 1239 aa22.69■■□□□ 1.22
UBE2D2-202ENST00000398733 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
UBE2D2-202ENST00000398733 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
UBE2D2-202ENST00000398733 INO80Q9ULG1 1556 aaPredicted RBP22.68■■□□□ 1.22
UBE2D2-202ENST00000398733 PLEKHF1Q96S99 279 aa22.68■■□□□ 1.22
UBE2D2-202ENST00000398733 EVC2Q86UK5 1308 aa22.68■■□□□ 1.22
UBE2D2-202ENST00000398733 ADGRL1O94910 1474 aa22.67■■□□□ 1.22
UBE2D2-202ENST00000398733 RIPK4P57078 832 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms