RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 KRTAP4-12Q9BQ66 201 aa7.62□□□□□ -1.19
CD47-203ENST00000398258 NXF1Q9UBU9 619 aaKnown RBP7.62□□□□□ -1.19
CD47-203ENST00000398258 ERBB4Q15303 1308 aa7.61□□□□□ -1.19
CD47-203ENST00000398258 TTC24A2A3L6 582 aaPredicted RBP7.61□□□□□ -1.19
CD47-203ENST00000398258 FUT2Q10981 343 aa7.61□□□□□ -1.19
CD47-203ENST00000398258 HPS1Q92902 700 aa7.61□□□□□ -1.19
CD47-203ENST00000398258 SLC27A5Q9Y2P5 690 aa7.61□□□□□ -1.19
CD47-203ENST00000398258 NLRP7Q8WX94 980 aa7.6□□□□□ -1.19
CD47-203ENST00000398258 SENP2Q9HC62 589 aa7.6□□□□□ -1.19
CD47-203ENST00000398258 NUTM2FA1L443 756 aa7.59□□□□□ -1.19
CD47-203ENST00000398258 WNT7AO00755 349 aa7.59□□□□□ -1.19
CD47-203ENST00000398258 RNF19BQ6ZMZ0 732 aa7.59□□□□□ -1.19
CD47-203ENST00000398258 MRGPRX2Q96LB1 330 aa7.59□□□□□ -1.19
CD47-203ENST00000398258 METTL3Q86U44 580 aaKnown RBP7.58□□□□□ -1.2
CD47-203ENST00000398258 SNIP1Q8TAD8 396 aaKnown RBP7.58□□□□□ -1.2
CD47-203ENST00000398258 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
CD47-203ENST00000398258 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
CD47-203ENST00000398258 FECHP22830 423 aa7.56□□□□□ -1.2
CD47-203ENST00000398258 TRIM32Q13049 653 aa7.56□□□□□ -1.2
CD47-203ENST00000398258 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
CD47-203ENST00000398258 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
CD47-203ENST00000398258 FMNL1O95466 1100 aaPredicted RBP7.55□□□□□ -1.2
CD47-203ENST00000398258 VEGFBP49765 207 aa7.55□□□□□ -1.2
CD47-203ENST00000398258 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
CD47-203ENST00000398258 FCHSD2O94868 740 aa7.54□□□□□ -1.2
CD47-203ENST00000398258 ATP6V1AP38606 617 aa7.54□□□□□ -1.2
CD47-203ENST00000398258 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
CD47-203ENST00000398258 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
CD47-203ENST00000398258 H3BM21 787 aa7.53□□□□□ -1.2
CD47-203ENST00000398258 SKOR1P84550 965 aa7.53□□□□□ -1.2
CD47-203ENST00000398258 MSS51Q4VC12 460 aa7.53□□□□□ -1.2
CD47-203ENST00000398258 RDH13Q8NBN7 331 aa7.53□□□□□ -1.2
CD47-203ENST00000398258 IGHA1P01876 353 aa7.52□□□□□ -1.21
CD47-203ENST00000398258 OATP04181 439 aa7.52□□□□□ -1.21
CD47-203ENST00000398258 KIFC2Q96AC6 838 aa7.52□□□□□ -1.21
CD47-203ENST00000398258 PHOX2BQ99453 314 aa7.52□□□□□ -1.21
CD47-203ENST00000398258 SALL2Q9Y467 1007 aaPredicted RBP7.52□□□□□ -1.21
CD47-203ENST00000398258 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
CD47-203ENST00000398258 ADAM23O75077 832 aa7.51□□□□□ -1.21
CD47-203ENST00000398258 GCGRP47871 477 aa7.51□□□□□ -1.21
CD47-203ENST00000398258 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
CD47-203ENST00000398258 DAXXQ9UER7 740 aaPredicted RBP7.51□□□□□ -1.21
CD47-203ENST00000398258 ZBTB24O43167 697 aaPredicted RBP7.5□□□□□ -1.21
CD47-203ENST00000398258 BMP1P13497 986 aa7.5□□□□□ -1.21
CD47-203ENST00000398258 GPR37O15354 613 aa7.49□□□□□ -1.21
CD47-203ENST00000398258 MMP16P51512 607 aa7.49□□□□□ -1.21
CD47-203ENST00000398258 SEMA3EO15041 775 aa7.48□□□□□ -1.21
CD47-203ENST00000398258 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.48□□□□□ -1.21
CD47-203ENST00000398258 RC3H1Q5TC82 1133 aaKnown RBP7.47□□□□□ -1.21
CD47-203ENST00000398258 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
CD47-203ENST00000398258 RSPH4AQ5TD94 716 aa7.46□□□□□ -1.22
CD47-203ENST00000398258 DXOO77932 396 aaKnown RBP7.45□□□□□ -1.22
CD47-203ENST00000398258 HIC1Q14526 733 aa7.45□□□□□ -1.22
CD47-203ENST00000398258 HLA-CQ95604 372 aa7.45□□□□□ -1.22
CD47-203ENST00000398258 DNMT3AQ9Y6K1 912 aaPredicted RBP7.45□□□□□ -1.22
CD47-203ENST00000398258 RBM26Q5T8P6 1007 aaKnown RBP7.44□□□□□ -1.22
CD47-203ENST00000398258 Q8N3U1 123 aa7.44□□□□□ -1.22
CD47-203ENST00000398258 SIAH2O43255 324 aa7.43□□□□□ -1.22
CD47-203ENST00000398258 TSHZ2Q9NRE2 1034 aa7.43□□□□□ -1.22
CD47-203ENST00000398258 ALDH1A1P00352 501 aa7.42□□□□□ -1.22
CD47-203ENST00000398258 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
CD47-203ENST00000398258 AMER1Q5JTC6 1135 aaPredicted RBP7.41□□□□□ -1.22
CD47-203ENST00000398258 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
CD47-203ENST00000398258 RNF225M0QZC1 329 aaPredicted RBP7.39□□□□□ -1.23
CD47-203ENST00000398258 GNPATO15228 680 aa7.39□□□□□ -1.23
CD47-203ENST00000398258 WNT7BP56706 349 aa7.39□□□□□ -1.23
CD47-203ENST00000398258 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
CD47-203ENST00000398258 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
CD47-203ENST00000398258 USB1Q9BQ65 265 aaKnown RBP7.39□□□□□ -1.23
CD47-203ENST00000398258 CAPN5O15484 640 aaPredicted RBP7.38□□□□□ -1.23
CD47-203ENST00000398258 ADAMTS8Q9UP79 889 aa7.38□□□□□ -1.23
CD47-203ENST00000398258 SOBPA7XYQ1 873 aa7.37□□□□□ -1.23
CD47-203ENST00000398258 ZFP42Q96MM3 310 aa7.37□□□□□ -1.23
CD47-203ENST00000398258 RTN4Q9NQC3 1192 aaKnown RBP7.37□□□□□ -1.23
CD47-203ENST00000398258 FOXK2Q01167 660 aa7.36□□□□□ -1.23
CD47-203ENST00000398258 GUCA2AQ02747 115 aa7.36□□□□□ -1.23
CD47-203ENST00000398258 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
CD47-203ENST00000398258 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
CD47-203ENST00000398258 CD46P15529 392 aa7.35□□□□□ -1.23
CD47-203ENST00000398258 Q3C1V9 767 aa7.35□□□□□ -1.23
CD47-203ENST00000398258 SYMPKQ92797 1274 aaKnown RBP7.35□□□□□ -1.23
CD47-203ENST00000398258 TESPA1A2RU30 521 aaPredicted RBP7.33□□□□□ -1.24
CD47-203ENST00000398258 SH3BP2P78314 561 aa7.31□□□□□ -1.24
CD47-203ENST00000398258 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
CD47-203ENST00000398258 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
CD47-203ENST00000398258 EHBP1Q8NDI1 1231 aa7.31□□□□□ -1.24
CD47-203ENST00000398258 TLL2Q9Y6L7 1015 aa7.31□□□□□ -1.24
CD47-203ENST00000398258 KDM4AO75164 1064 aa7.3□□□□□ -1.24
CD47-203ENST00000398258 JUNDP17535 347 aa7.3□□□□□ -1.24
CD47-203ENST00000398258 HOXA2O43364 376 aa7.29□□□□□ -1.24
CD47-203ENST00000398258 IRS1P35568 1242 aa7.29□□□□□ -1.24
CD47-203ENST00000398258 WASF2Q9Y6W5 498 aa7.29□□□□□ -1.24
CD47-203ENST00000398258 PURBQ96QR8 312 aaKnown RBP7.28□□□□□ -1.24
CD47-203ENST00000398258 MRPL14Q6P1L8 145 aaKnown RBP7.27□□□□□ -1.25
CD47-203ENST00000398258 NUDT12Q9BQG2 462 aa7.27□□□□□ -1.25
CD47-203ENST00000398258 KLF16Q9BXK1 252 aaPredicted RBP7.27□□□□□ -1.25
CD47-203ENST00000398258 TIMP2P16035 220 aa7.26□□□□□ -1.25
CD47-203ENST00000398258 KRT76Q01546 638 aa7.26□□□□□ -1.25
CD47-203ENST00000398258 NNTQ13423 1086 aa7.24□□□□□ -1.25
CD47-203ENST00000398258 LINC01559Q495D7 138 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms