RNA–Protein interactions for RNA: ENST00000398004.3

SLC35E3-202, Transcript of solute carrier family 35 member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35E3, Length 17,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35E3-202ENST00000398004 ERLIN1O75477 346 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 CCDC47Q96A33 483 aaKnown RBP9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 DDX11Q96FC9 970 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 PDE3AQ14432 1141 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 UBXN4Q92575 508 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 SPAG9O60271 1321 aaKnown RBP9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 CENPHQ9H3R5 247 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 KINO60870 393 aaKnown RBP9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 PDCP20941 246 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 GOLGA6L7A0A1B0GV03 622 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 LRRFIP1Q32MZ4 808 aaKnown RBP9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
SLC35E3-202ENST00000398004 NUP155O75694 1391 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 TTLL5Q6EMB2 1281 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 KIF18AQ8NI77 898 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 NOL10Q9BSC4 688 aaKnown RBP9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 KANK1Q14678 1352 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 INCENPQ9NQS7 918 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 IRX3P78415 501 aaPredicted RBP9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 STK11IPQ8N1F8 1099 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 FMN1Q68DA7 1419 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 IPO4Q8TEX9 1081 aaKnown RBP9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 POLR3GO15318 223 aaPredicted RBP9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
SLC35E3-202ENST00000398004 IFIT2P09913 472 aaKnown RBP9.21□□□□□ -0.93
SLC35E3-202ENST00000398004 SMARCE1Q969G3 411 aa9.21□□□□□ -0.93
SLC35E3-202ENST00000398004 TMCO3Q6UWJ1 677 aa9.21□□□□□ -0.93
SLC35E3-202ENST00000398004 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.93
SLC35E3-202ENST00000398004 RUNDC1Q96C34 613 aa9.21□□□□□ -0.93
SLC35E3-202ENST00000398004 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 CLCN1P35523 988 aa9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 FOSBP53539 338 aa9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 TOMM22Q9NS69 142 aa9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 KIF2AO00139 706 aaPredicted RBP9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 LRRCC1Q9C099 1032 aa9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 ADAMTS8Q9UP79 889 aa9.21□□□□□ -0.94
SLC35E3-202ENST00000398004 FILIP1LQ4L180 1135 aa9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 CARMIL1Q5VZK9 1371 aa9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 WDR33Q9C0J8 1336 aaKnown RBP9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 ZNF396Q96N95 335 aaPredicted RBP9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 BRD4O60885 1362 aaPredicted RBP9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 SAFBQ15424 915 aaKnown RBP eCLIP9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
SLC35E3-202ENST00000398004 PRIMPOLQ96LW4 560 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 ERLIN2O94905 339 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 USP47Q96K76 1375 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 SMG6Q86US8 1419 aaKnown RBP9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 CCDC102AQ96A19 550 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 ERC2O15083 957 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 RIPK4P57078 832 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 GTF2F1P35269 517 aaKnown RBP eCLIP9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 PTPN14Q15678 1187 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 ODF2Q5BJF6 829 aa9.19□□□□□ -0.94
SLC35E3-202ENST00000398004 SERPINC1P01008 464 aa9.18□□□□□ -0.94
SLC35E3-202ENST00000398004 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
SLC35E3-202ENST00000398004 SYCE3A1L190 88 aa9.18□□□□□ -0.94
SLC35E3-202ENST00000398004 FIBPO43427 364 aa9.18□□□□□ -0.94
SLC35E3-202ENST00000398004 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
SLC35E3-202ENST00000398004 CBFA2T2O43439 604 aa9.18□□□□□ -0.94
SLC35E3-202ENST00000398004 FAM193AP78312 1265 aa9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 CCDC9Q9Y3X0 531 aaKnown RBP9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 HSP90AB4PQ58FF6 505 aa9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 G3BP1Q13283 466 aaKnown RBP eCLIP9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 ZNHIT6Q9NWK9 470 aaKnown RBP9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 WASHC2AQ641Q2 1341 aa9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 CASQ1P31415 396 aa9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 TRDNQ13061 729 aa9.17□□□□□ -0.94
SLC35E3-202ENST00000398004 IQCEQ6IPM2 695 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 SMAP1Q8IYB5 467 aaPredicted RBP9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 ANKRD30AQ9BXX3 1397 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 KRT222Q8N1A0 295 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 NFXL1Q6ZNB6 911 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 TNNT1P13805 278 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 MICALCLQ6ZW33 695 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 PAXBP1Q9Y5B6 917 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 FILIP1Q7Z7B0 1213 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 CNTROBQ8N137 903 aa9.16□□□□□ -0.94
SLC35E3-202ENST00000398004 VPS53Q5VIR6 699 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 GCC1Q96CN9 775 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 CCDC94Q9BW85 323 aaPredicted RBP9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 XRCC6P12956 609 aaKnown RBP eCLIP9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 BMS1Q14692 1282 aaKnown RBP9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 FAM177A1Q8N128 213 aaPredicted RBP9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 C9orf78Q9NZ63 289 aaPredicted RBP9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 TXLNBQ8N3L3 684 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 MAP9Q49MG5 647 aa9.15□□□□□ -0.94
SLC35E3-202ENST00000398004 TICAM2Q86XR7 235 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms