RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CERKQ8TCT0 537 aa14.71□□□□□ -0.05
PUM3-202ENST00000397885 USP19O94966 1318 aa14.7□□□□□ -0.06
PUM3-202ENST00000397885 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
PUM3-202ENST00000397885 PANK2Q9BZ23 570 aa14.7□□□□□ -0.06
PUM3-202ENST00000397885 SMAP1Q8IYB5 467 aaPredicted RBP14.69□□□□□ -0.06
PUM3-202ENST00000397885 RALGAPBQ86X10 1494 aa14.69□□□□□ -0.06
PUM3-202ENST00000397885 CEP152O94986 1710 aa14.69□□□□□ -0.06
PUM3-202ENST00000397885 NLRP1Q9C000 1473 aa14.69□□□□□ -0.06
PUM3-202ENST00000397885 PRDM15P57071 1507 aaPredicted RBP14.68□□□□□ -0.06
PUM3-202ENST00000397885 MTERF4Q7Z6M4 381 aaKnown RBP14.68□□□□□ -0.06
PUM3-202ENST00000397885 DEPDC5O75140 1603 aa14.68□□□□□ -0.06
PUM3-202ENST00000397885 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
PUM3-202ENST00000397885 PLIN1O60240 522 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 MCM4P33991 863 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 NLRP13Q86W25 1043 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 TRIM44Q96DX7 344 aaPredicted RBP14.67□□□□□ -0.06
PUM3-202ENST00000397885 ANKRD50Q9ULJ7 1429 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 KANK1Q14678 1352 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 SPATA31D1Q6ZQQ2 1576 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
PUM3-202ENST00000397885 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
PUM3-202ENST00000397885 ZNF326Q5BKZ1 582 aaKnown RBP14.66□□□□□ -0.06
PUM3-202ENST00000397885 PDE4CQ08493 712 aa14.66□□□□□ -0.06
PUM3-202ENST00000397885 POLR3GLQ9BT43 218 aa14.66□□□□□ -0.06
PUM3-202ENST00000397885 ARHGAP31Q2M1Z3 1444 aa14.65□□□□□ -0.06
PUM3-202ENST00000397885 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
PUM3-202ENST00000397885 RGS3P49796 1198 aa14.65□□□□□ -0.06
PUM3-202ENST00000397885 THEMISQ8N1K5 641 aaPredicted RBP14.65□□□□□ -0.06
PUM3-202ENST00000397885 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.65□□□□□ -0.06
PUM3-202ENST00000397885 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
PUM3-202ENST00000397885 KIAA1211Q6ZU35 1233 aa14.64□□□□□ -0.07
PUM3-202ENST00000397885 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
PUM3-202ENST00000397885 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
PUM3-202ENST00000397885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.071e-6■■■□□ 18.4
PUM3-202ENST00000397885 UGGT1Q9NYU2 1555 aa14.63□□□□□ -0.07
PUM3-202ENST00000397885 SLKQ9H2G2 1235 aaPredicted RBP14.63□□□□□ -0.07
PUM3-202ENST00000397885 E9PCH4 1651 aa14.63□□□□□ -0.07
PUM3-202ENST00000397885 TRAK2O60296 914 aa14.63□□□□□ -0.07
PUM3-202ENST00000397885 OFD1O75665 1012 aa14.63□□□□□ -0.07
PUM3-202ENST00000397885 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
PUM3-202ENST00000397885 MAPK8IP3Q9UPT6 1336 aa14.62□□□□□ -0.07
PUM3-202ENST00000397885 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
PUM3-202ENST00000397885 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
PUM3-202ENST00000397885 LMTK2Q8IWU2 1503 aa14.62□□□□□ -0.07
PUM3-202ENST00000397885 CFAP65Q6ZU64 1925 aaKnown RBP14.62□□□□□ -0.07
PUM3-202ENST00000397885 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
PUM3-202ENST00000397885 CARD11Q9BXL7 1154 aa14.61□□□□□ -0.07
PUM3-202ENST00000397885 VWDEQ8N2E2 1590 aa14.61□□□□□ -0.07
PUM3-202ENST00000397885 LTBP4Q8N2S1 1624 aa14.61□□□□□ -0.07
PUM3-202ENST00000397885 DDX11L8A8MPP1 907 aa14.61□□□□□ -0.07
PUM3-202ENST00000397885 UTP14CQ5TAP6 766 aaKnown RBP14.61□□□□□ -0.07
PUM3-202ENST00000397885 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
PUM3-202ENST00000397885 NUP155O75694 1391 aa14.6□□□□□ -0.07
PUM3-202ENST00000397885 C20orf194Q5TEA3 1177 aa14.6□□□□□ -0.07
PUM3-202ENST00000397885 IQSEC2Q5JU85 1478 aa14.6□□□□□ -0.07
PUM3-202ENST00000397885 UPF2Q9HAU5 1272 aaKnown RBP14.59□□□□□ -0.07
PUM3-202ENST00000397885 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
PUM3-202ENST00000397885 CHMP5Q9NZZ3 219 aa14.58□□□□□ -0.08
PUM3-202ENST00000397885 NEURL4Q96JN8 1562 aa14.57□□□□□ -0.08
PUM3-202ENST00000397885 RIPK4P57078 832 aa14.57□□□□□ -0.08
PUM3-202ENST00000397885 UBR1Q8IWV7 1749 aa14.57□□□□□ -0.08
PUM3-202ENST00000397885 CCDC173Q0VFZ6 552 aa14.57□□□□□ -0.08
PUM3-202ENST00000397885 ZSCAN30Q86W11 494 aa14.57□□□□□ -0.08
PUM3-202ENST00000397885 TBC1D32Q96NH3 1257 aa14.56□□□□□ -0.08
PUM3-202ENST00000397885 ARXQ96QS3 562 aa14.56□□□□□ -0.08
PUM3-202ENST00000397885 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
PUM3-202ENST00000397885 MED14O60244 1454 aa14.56□□□□□ -0.08
PUM3-202ENST00000397885 PTMSP20962 102 aa14.55□□□□□ -0.08
PUM3-202ENST00000397885 PPP1R9BQ96SB3 815 aa14.55□□□□□ -0.08
PUM3-202ENST00000397885 GZF1Q9H116 711 aaPredicted RBP14.55□□□□□ -0.08
PUM3-202ENST00000397885 ZNF335Q9H4Z2 1342 aaPredicted RBP14.55□□□□□ -0.08
PUM3-202ENST00000397885 EFCAB6Q5THR3 1501 aa14.55□□□□□ -0.08
PUM3-202ENST00000397885 NPHP4O75161 1426 aaPredicted RBP14.54□□□□□ -0.08
PUM3-202ENST00000397885 UNC13BO14795 1591 aa14.54□□□□□ -0.08
PUM3-202ENST00000397885 HS1BP3Q53T59 392 aa14.53□□□□□ -0.08
PUM3-202ENST00000397885 KDM5AP29375 1690 aaKnown RBP14.53□□□□□ -0.08
PUM3-202ENST00000397885 ST20-MTHFSA0A0A6YYL1 179 aa14.53□□□□□ -0.08
PUM3-202ENST00000397885 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
PUM3-202ENST00000397885 TET3O43151 1660 aa14.53□□□□□ -0.08
PUM3-202ENST00000397885 IQGAP1P46940 1657 aa14.52□□□□□ -0.08
PUM3-202ENST00000397885 PIK3C2BO00750 1634 aa14.52□□□□□ -0.08
PUM3-202ENST00000397885 SEC24BO95487 1268 aa14.52□□□□□ -0.09
PUM3-202ENST00000397885 DMTNQ08495 405 aa14.52□□□□□ -0.09
PUM3-202ENST00000397885 NOS1P29475 1434 aa14.51□□□□□ -0.09
PUM3-202ENST00000397885 SLIT1O75093 1534 aa14.51□□□□□ -0.09
PUM3-202ENST00000397885 DYNC1I1O14576 645 aa14.51□□□□□ -0.09
PUM3-202ENST00000397885 ARHGAP23Q9P227 1491 aa14.51□□□□□ -0.09
PUM3-202ENST00000397885 MSNP26038 577 aaKnown RBP14.5□□□□□ -0.09
PUM3-202ENST00000397885 DUSP27Q5VZP5 1158 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 CPS1P31327 1500 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 SYNMO15061 1565 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
PUM3-202ENST00000397885 IDI1Q13907 227 aa14.49□□□□□ -0.09
PUM3-202ENST00000397885 EID1Q9Y6B2 187 aa14.49□□□□□ -0.09
PUM3-202ENST00000397885 SCAF11Q99590 1463 aaKnown RBP14.49□□□□□ -0.09
PUM3-202ENST00000397885 PDIA4P13667 645 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms