RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
SNRNP25-203ENST00000397876 STK26Q9P289 416 aa21.18■□□□□ 0.98
SNRNP25-203ENST00000397876 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
SNRNP25-203ENST00000397876 RXRBP28702 533 aa21.17■□□□□ 0.98
SNRNP25-203ENST00000397876 ABCC11Q96J66 1382 aa21.16■□□□□ 0.98
SNRNP25-203ENST00000397876 C8orf37Q96NL8 207 aa21.16■□□□□ 0.98
SNRNP25-203ENST00000397876 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
SNRNP25-203ENST00000397876 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.98
SNRNP25-203ENST00000397876 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.97
SNRNP25-203ENST00000397876 MYOM2P54296 1465 aa21.13■□□□□ 0.97
SNRNP25-203ENST00000397876 YTHDC2Q9H6S0 1430 aaKnown RBP21.13■□□□□ 0.97
SNRNP25-203ENST00000397876 NPHP3Q7Z494 1330 aa21.13■□□□□ 0.97
SNRNP25-203ENST00000397876 ESCO1Q5FWF5 840 aa21.13■□□□□ 0.97
SNRNP25-203ENST00000397876 WAPLQ7Z5K2 1190 aa21.13■□□□□ 0.97
SNRNP25-203ENST00000397876 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
SNRNP25-203ENST00000397876 COL22A1Q8NFW1 1626 aaPredicted RBP21.11■□□□□ 0.97
SNRNP25-203ENST00000397876 ADAMTS2O95450 1211 aa21.11■□□□□ 0.97
SNRNP25-203ENST00000397876 PLEKHH1Q9ULM0 1364 aa21.1■□□□□ 0.97
SNRNP25-203ENST00000397876 PXDNQ92626 1479 aa21.1■□□□□ 0.97
SNRNP25-203ENST00000397876 NGLY1Q96IV0 654 aa21.1■□□□□ 0.97
SNRNP25-203ENST00000397876 FMN2Q9NZ56 1722 aa21.09■□□□□ 0.97
SNRNP25-203ENST00000397876 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
SNRNP25-203ENST00000397876 NUTM2FA1L443 756 aa21.07■□□□□ 0.96
SNRNP25-203ENST00000397876 QTRT2Q9H974 415 aaKnown RBP21.07■□□□□ 0.96
SNRNP25-203ENST00000397876 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
SNRNP25-203ENST00000397876 DHX57Q6P158 1386 aaKnown RBP21.07■□□□□ 0.96
SNRNP25-203ENST00000397876 FOXO3O43524 673 aa21.06■□□□□ 0.96
SNRNP25-203ENST00000397876 RBM6P78332 1123 aaKnown RBP21.06■□□□□ 0.96
SNRNP25-203ENST00000397876 SIRT1Q96EB6 747 aa21.06■□□□□ 0.96
SNRNP25-203ENST00000397876 RGS12O14924 1447 aa21.05■□□□□ 0.96
SNRNP25-203ENST00000397876 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
SNRNP25-203ENST00000397876 UPF1Q92900 1129 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNRNP25-203ENST00000397876 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
SNRNP25-203ENST00000397876 USP21Q9UK80 565 aa21.03■□□□□ 0.96
SNRNP25-203ENST00000397876 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
SNRNP25-203ENST00000397876 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
SNRNP25-203ENST00000397876 MARF1Q9Y4F3 1742 aaKnown RBP20.99■□□□□ 0.95
SNRNP25-203ENST00000397876 FNBP4Q8N3X1 1017 aaPredicted RBP20.99■□□□□ 0.95
SNRNP25-203ENST00000397876 PRAM1Q96QH2 718 aa20.99■□□□□ 0.95
SNRNP25-203ENST00000397876 SAFB2Q14151 953 aaKnown RBP eCLIP20.97■□□□□ 0.95
SNRNP25-203ENST00000397876 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
SNRNP25-203ENST00000397876 ATRNO75882 1429 aa20.96■□□□□ 0.95
SNRNP25-203ENST00000397876 POGKQ9P215 609 aa20.96■□□□□ 0.95
SNRNP25-203ENST00000397876 SPATA31A3Q5VYP0 1347 aa20.96■□□□□ 0.95
SNRNP25-203ENST00000397876 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
SNRNP25-203ENST00000397876 ADGRB2O60241 1585 aa20.95■□□□□ 0.94
SNRNP25-203ENST00000397876 KRT28Q7Z3Y7 464 aa20.95■□□□□ 0.94
SNRNP25-203ENST00000397876 PHF8Q9UPP1 1060 aa20.95■□□□□ 0.94
SNRNP25-203ENST00000397876 HRCP23327 699 aa20.94■□□□□ 0.94
SNRNP25-203ENST00000397876 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
SNRNP25-203ENST00000397876 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
SNRNP25-203ENST00000397876 ANKARQ7Z5J8 1434 aa20.93■□□□□ 0.94
SNRNP25-203ENST00000397876 PSME1Q06323 249 aa20.92■□□□□ 0.94
SNRNP25-203ENST00000397876 KDM2AQ9Y2K7 1162 aa20.92■□□□□ 0.94
SNRNP25-203ENST00000397876 BCL9LQ86UU0 1499 aa20.92■□□□□ 0.94
SNRNP25-203ENST00000397876 ATAD2Q6PL18 1390 aa20.91■□□□□ 0.94
SNRNP25-203ENST00000397876 USP32Q8NFA0 1604 aa20.91■□□□□ 0.94
SNRNP25-203ENST00000397876 STAC3Q96MF2 364 aa20.91■□□□□ 0.94
SNRNP25-203ENST00000397876 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.91■□□□□ 0.94
SNRNP25-203ENST00000397876 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
SNRNP25-203ENST00000397876 SBNO1A3KN83 1393 aa20.89■□□□□ 0.93
SNRNP25-203ENST00000397876 EIF3AQ14152 1382 aaKnown RBP20.89■□□□□ 0.93
SNRNP25-203ENST00000397876 HAP1P54257 671 aaPredicted RBP20.89■□□□□ 0.93
SNRNP25-203ENST00000397876 ARHGEF10O15013 1369 aa20.87■□□□□ 0.93
SNRNP25-203ENST00000397876 SLIT2O94813 1529 aa20.87■□□□□ 0.93
SNRNP25-203ENST00000397876 MINK1Q8N4C8 1332 aaPredicted RBP20.86■□□□□ 0.93
SNRNP25-203ENST00000397876 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
SNRNP25-203ENST00000397876 TULP4Q9NRJ4 1543 aa20.86■□□□□ 0.93
SNRNP25-203ENST00000397876 ABCA3Q99758 1704 aa20.85■□□□□ 0.93
SNRNP25-203ENST00000397876 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
SNRNP25-203ENST00000397876 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
SNRNP25-203ENST00000397876 GJD4Q96KN9 370 aaPredicted RBP20.85■□□□□ 0.93
SNRNP25-203ENST00000397876 UNC5CLQ8IV45 518 aa20.84■□□□□ 0.93
SNRNP25-203ENST00000397876 ARHGEF28Q8N1W1 1705 aaKnown RBP20.83■□□□□ 0.92
SNRNP25-203ENST00000397876 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
SNRNP25-203ENST00000397876 CABLES1Q8TDN4 633 aa20.82■□□□□ 0.92
SNRNP25-203ENST00000397876 GPRASP1Q5JY77 1395 aa20.82■□□□□ 0.92
SNRNP25-203ENST00000397876 RALGAPBQ86X10 1494 aa20.81■□□□□ 0.92
SNRNP25-203ENST00000397876 GLI3P10071 1580 aa20.81■□□□□ 0.92
SNRNP25-203ENST00000397876 PLCH1Q4KWH8 1693 aa20.81■□□□□ 0.92
SNRNP25-203ENST00000397876 WASLO00401 505 aaPredicted RBP20.81■□□□□ 0.92
SNRNP25-203ENST00000397876 TRPM3Q9HCF6 1732 aaPredicted RBP20.81■□□□□ 0.92
SNRNP25-203ENST00000397876 PRR36Q9H6K5 1346 aa20.8■□□□□ 0.92
SNRNP25-203ENST00000397876 NWD2Q9ULI1 1742 aa20.8■□□□□ 0.92
SNRNP25-203ENST00000397876 ALS2Q96Q42 1657 aa20.78■□□□□ 0.92
SNRNP25-203ENST00000397876 ITSN1Q15811 1721 aa20.78■□□□□ 0.92
SNRNP25-203ENST00000397876 KIAA1210Q9ULL0 1709 aa20.77■□□□□ 0.92
SNRNP25-203ENST00000397876 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
SNRNP25-203ENST00000397876 ATP7BP35670 1465 aa20.75■□□□□ 0.91
SNRNP25-203ENST00000397876 VPS72Q15906 364 aa20.75■□□□□ 0.91
SNRNP25-203ENST00000397876 CCDC9Q9Y3X0 531 aaKnown RBP20.74■□□□□ 0.91
SNRNP25-203ENST00000397876 CCDC125Q86Z20 511 aa20.73■□□□□ 0.91
SNRNP25-203ENST00000397876 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
SNRNP25-203ENST00000397876 NUDT16Q96DE0 195 aaKnown RBP20.71■□□□□ 0.91
SNRNP25-203ENST00000397876 EP400Q96L91 3159 aa20.71■□□□□ 0.91
SNRNP25-203ENST00000397876 COL14A1Q05707 1796 aaKnown RBP20.71■□□□□ 0.91
SNRNP25-203ENST00000397876 NRAPQ86VF7 1730 aa20.7■□□□□ 0.9
SNRNP25-203ENST00000397876 FAM83GA6ND36 823 aa20.7■□□□□ 0.9
SNRNP25-203ENST00000397876 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
SNRNP25-203ENST00000397876 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms