RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 MYOM2P54296 1465 aa15.72■□□□□ 0.11
FGFR1-208ENST00000397108 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
FGFR1-208ENST00000397108 C11orf95C9JLR9 678 aaPredicted RBP15.71■□□□□ 0.11
FGFR1-208ENST00000397108 LRRC7Q96NW7 1537 aa15.71■□□□□ 0.11
FGFR1-208ENST00000397108 KCNA6P17658 529 aa15.71■□□□□ 0.11
FGFR1-208ENST00000397108 ALKQ9UM73 1620 aa15.7■□□□□ 0.1
FGFR1-208ENST00000397108 XIRP1Q702N8 1843 aaKnown RBP15.7■□□□□ 0.1
FGFR1-208ENST00000397108 NRXN1Q9ULB1 1477 aa15.69■□□□□ 0.1
FGFR1-208ENST00000397108 XRN1Q8IZH2 1706 aaKnown RBP15.69■□□□□ 0.1
FGFR1-208ENST00000397108 ADGRF5Q8IZF2 1346 aa15.69■□□□□ 0.1
FGFR1-208ENST00000397108 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
FGFR1-208ENST00000397108 LAMC1P11047 1609 aa15.67■□□□□ 0.1
FGFR1-208ENST00000397108 METP08581 1390 aa15.67■□□□□ 0.1
FGFR1-208ENST00000397108 EIF4G2P78344 907 aaKnown RBP eCLIP15.66■□□□□ 0.1
FGFR1-208ENST00000397108 PTPRUQ92729 1446 aa15.66■□□□□ 0.1
FGFR1-208ENST00000397108 FBXO41Q8TF61 875 aa15.64■□□□□ 0.09
FGFR1-208ENST00000397108 STAC3Q96MF2 364 aa15.64■□□□□ 0.09
FGFR1-208ENST00000397108 USP35Q9P2H5 1018 aa15.64■□□□□ 0.09
FGFR1-208ENST00000397108 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
FGFR1-208ENST00000397108 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
FGFR1-208ENST00000397108 PDE4AP27815 886 aa15.62■□□□□ 0.09
FGFR1-208ENST00000397108 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
FGFR1-208ENST00000397108 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
FGFR1-208ENST00000397108 DCAF11Q8TEB1 546 aa15.62■□□□□ 0.09
FGFR1-208ENST00000397108 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
FGFR1-208ENST00000397108 ASXL1Q8IXJ9 1541 aa15.61■□□□□ 0.09
FGFR1-208ENST00000397108 GSE1Q14687 1217 aa15.61■□□□□ 0.09
FGFR1-208ENST00000397108 SLC4A3P48751 1232 aa15.61■□□□□ 0.09
FGFR1-208ENST00000397108 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
FGFR1-208ENST00000397108 NCOA3Q9Y6Q9 1424 aa15.61■□□□□ 0.09
FGFR1-208ENST00000397108 KNDC1Q76NI1 1749 aa15.6■□□□□ 0.09
FGFR1-208ENST00000397108 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
FGFR1-208ENST00000397108 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
FGFR1-208ENST00000397108 SKAP1Q86WV1 359 aa15.59■□□□□ 0.09
FGFR1-208ENST00000397108 C14orf93Q9H972 538 aaKnown RBP15.59■□□□□ 0.09
FGFR1-208ENST00000397108 FRAT1Q92837 279 aaPredicted RBP15.59■□□□□ 0.09
FGFR1-208ENST00000397108 SMG6Q86US8 1419 aaKnown RBP15.59■□□□□ 0.09
FGFR1-208ENST00000397108 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.09
FGFR1-208ENST00000397108 KIAA1210Q9ULL0 1709 aa15.58■□□□□ 0.08
FGFR1-208ENST00000397108 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.08
FGFR1-208ENST00000397108 TECPR2O15040 1411 aa15.57■□□□□ 0.08
FGFR1-208ENST00000397108 UBAP1LF5GYI3 381 aa15.57■□□□□ 0.08
FGFR1-208ENST00000397108 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
FGFR1-208ENST00000397108 LRPPRCP42704 1394 aaKnown RBP15.56■□□□□ 0.08
FGFR1-208ENST00000397108 CCDC7Q96M83 1385 aa15.56■□□□□ 0.08
FGFR1-208ENST00000397108 ADGRB1O14514 1584 aa15.56■□□□□ 0.08
FGFR1-208ENST00000397108 CFAP70Q5T0N1 1121 aa15.56■□□□□ 0.08
FGFR1-208ENST00000397108 RBM33Q96EV2 1170 aaKnown RBP15.56■□□□□ 0.08
FGFR1-208ENST00000397108 RNF123Q5XPI4 1314 aa15.55■□□□□ 0.08
FGFR1-208ENST00000397108 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.55■□□□□ 0.08
FGFR1-208ENST00000397108 MSH6P52701 1360 aa15.55■□□□□ 0.08
FGFR1-208ENST00000397108 TOM1O60784 492 aa15.55■□□□□ 0.08
FGFR1-208ENST00000397108 NFKBIBQ15653 356 aa15.55■□□□□ 0.08
FGFR1-208ENST00000397108 BACH2Q9BYV9 841 aa15.55■□□□□ 0.08
FGFR1-208ENST00000397108 YTHDC2Q9H6S0 1430 aaKnown RBP15.55■□□□□ 0.08
FGFR1-208ENST00000397108 ROBO2Q9HCK4 1378 aa15.54■□□□□ 0.08
FGFR1-208ENST00000397108 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
FGFR1-208ENST00000397108 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
FGFR1-208ENST00000397108 ABCC11Q96J66 1382 aa15.54■□□□□ 0.08
FGFR1-208ENST00000397108 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
FGFR1-208ENST00000397108 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
FGFR1-208ENST00000397108 DCCP43146 1447 aa15.52■□□□□ 0.07
FGFR1-208ENST00000397108 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
FGFR1-208ENST00000397108 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
FGFR1-208ENST00000397108 C14orf37Q86TY3 774 aa15.5■□□□□ 0.07
FGFR1-208ENST00000397108 PKNOX2Q96KN3 472 aa15.5■□□□□ 0.07
FGFR1-208ENST00000397108 C19orf44Q9H6X5 657 aa15.5■□□□□ 0.07
FGFR1-208ENST00000397108 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
FGFR1-208ENST00000397108 STK26Q9P289 416 aa15.5■□□□□ 0.07
FGFR1-208ENST00000397108 FAM135BQ49AJ0 1406 aa15.5■□□□□ 0.07
FGFR1-208ENST00000397108 TRPM1Q7Z4N2 1603 aa15.49■□□□□ 0.07
FGFR1-208ENST00000397108 SIRT1Q96EB6 747 aa15.49■□□□□ 0.07
FGFR1-208ENST00000397108 ARHGEF28Q8N1W1 1705 aaKnown RBP15.47■□□□□ 0.07
FGFR1-208ENST00000397108 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
FGFR1-208ENST00000397108 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
FGFR1-208ENST00000397108 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
FGFR1-208ENST00000397108 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.07
FGFR1-208ENST00000397108 ROBO1Q9Y6N7 1651 aa15.46■□□□□ 0.07
FGFR1-208ENST00000397108 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
FGFR1-208ENST00000397108 ATF3P18847 181 aa15.46■□□□□ 0.06
FGFR1-208ENST00000397108 RSPH6AQ9H0K4 717 aa15.45■□□□□ 0.06
FGFR1-208ENST00000397108 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
FGFR1-208ENST00000397108 PLEKHH1Q9ULM0 1364 aa15.45■□□□□ 0.06
FGFR1-208ENST00000397108 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
FGFR1-208ENST00000397108 SLAIN2Q9P270 581 aa15.44■□□□□ 0.06
FGFR1-208ENST00000397108 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
FGFR1-208ENST00000397108 MST1RQ04912 1400 aa15.43■□□□□ 0.06
FGFR1-208ENST00000397108 TMC1Q8TDI8 760 aa15.43■□□□□ 0.06
FGFR1-208ENST00000397108 NBPF1Q3BBV0 1214 aa15.42■□□□□ 0.06
FGFR1-208ENST00000397108 DDRGK1Q96HY6 314 aa15.42■□□□□ 0.06
FGFR1-208ENST00000397108 ADGRB2O60241 1585 aa15.42■□□□□ 0.06
FGFR1-208ENST00000397108 PLIN1O60240 522 aa15.42■□□□□ 0.06
FGFR1-208ENST00000397108 PRAM1Q96QH2 718 aa15.42■□□□□ 0.06
FGFR1-208ENST00000397108 TRAK1Q9UPV9 953 aa15.42■□□□□ 0.06
FGFR1-208ENST00000397108 FMN2Q9NZ56 1722 aa15.41■□□□□ 0.06
FGFR1-208ENST00000397108 MS4A1P11836 297 aa15.41■□□□□ 0.06
FGFR1-208ENST00000397108 RCAN3Q9UKA8 241 aa15.4■□□□□ 0.06
FGFR1-208ENST00000397108 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
FGFR1-208ENST00000397108 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
FGFR1-208ENST00000397108 POGKQ9P215 609 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms