RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CHMP4BP1P59074 171 aa21.16■□□□□ 0.98
MCF2L-208ENST00000397030 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
MCF2L-208ENST00000397030 GGNBP2Q9H3C7 697 aa21.16■□□□□ 0.98
MCF2L-208ENST00000397030 ATP6V1DQ9Y5K8 247 aa21.16■□□□□ 0.98
MCF2L-208ENST00000397030 TXNDC2Q86VQ3 553 aa21.16■□□□□ 0.98
MCF2L-208ENST00000397030 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-208ENST00000397030 MYBBP1AQ9BQG0 1328 aaKnown RBP21.15■□□□□ 0.98
MCF2L-208ENST00000397030 APAF1O14727 1248 aa21.15■□□□□ 0.98
MCF2L-208ENST00000397030 MYCNP04198 464 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-208ENST00000397030 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
MCF2L-208ENST00000397030 TMEM132EQ6IEE7 984 aa21.15■□□□□ 0.98
MCF2L-208ENST00000397030 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
MCF2L-208ENST00000397030 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
MCF2L-208ENST00000397030 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
MCF2L-208ENST00000397030 TBC1D2BQ9UPU7 963 aa21.13■□□□□ 0.97
MCF2L-208ENST00000397030 RBM19Q9Y4C8 960 aaKnown RBP21.13■□□□□ 0.97
MCF2L-208ENST00000397030 DDX49Q9Y6V7 483 aaKnown RBP21.13■□□□□ 0.97
MCF2L-208ENST00000397030 ATP2B1P20020 1258 aa21.13■□□□□ 0.97
MCF2L-208ENST00000397030 E9PSI1 815 aa21.12■□□□□ 0.97
MCF2L-208ENST00000397030 TTC39AQ5SRH9 613 aa21.12■□□□□ 0.97
MCF2L-208ENST00000397030 ZSCAN29Q8IWY8 852 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-208ENST00000397030 PPM1FP49593 454 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-208ENST00000397030 CABP4P57796 275 aa21.11■□□□□ 0.97
MCF2L-208ENST00000397030 MPHOSPH10O00566 681 aaKnown RBP21.11■□□□□ 0.97
MCF2L-208ENST00000397030 CDK5RAP3Q96JB5 506 aa21.11■□□□□ 0.97
MCF2L-208ENST00000397030 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-208ENST00000397030 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
MCF2L-208ENST00000397030 CRBNQ96SW2 442 aa21.1■□□□□ 0.97
MCF2L-208ENST00000397030 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
MCF2L-208ENST00000397030 ERC2O15083 957 aa21.1■□□□□ 0.97
MCF2L-208ENST00000397030 KRT18P05783 430 aaKnown RBP21.1■□□□□ 0.97
MCF2L-208ENST00000397030 UBTFL1P0CB47 393 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-208ENST00000397030 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
MCF2L-208ENST00000397030 OFD1O75665 1012 aa21.09■□□□□ 0.97
MCF2L-208ENST00000397030 SLC3A2P08195 630 aaKnown RBP21.08■□□□□ 0.97
MCF2L-208ENST00000397030 TATP17735 454 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-208ENST00000397030 HOMER1Q86YM7 354 aa21.08■□□□□ 0.97
MCF2L-208ENST00000397030 API5Q9BZZ5 524 aaKnown RBP21.08■□□□□ 0.97
MCF2L-208ENST00000397030 FSD1Q9BTV5 496 aa21.08■□□□□ 0.96
MCF2L-208ENST00000397030 SETQ01105 290 aaPredicted RBP21.08■□□□□ 0.96
MCF2L-208ENST00000397030 TTLL5Q6EMB2 1281 aa21.07■□□□□ 0.96
MCF2L-208ENST00000397030 XBP1P17861 261 aa21.07■□□□□ 0.96
MCF2L-208ENST00000397030 SKIDA1Q1XH10 827 aa21.07■□□□□ 0.96
MCF2L-208ENST00000397030 SMC3Q9UQE7 1217 aa21.07■□□□□ 0.96
MCF2L-208ENST00000397030 SPINK5Q9NQ38 1064 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-208ENST00000397030 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
MCF2L-208ENST00000397030 REC8O95072 547 aa21.06■□□□□ 0.96
MCF2L-208ENST00000397030 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
MCF2L-208ENST00000397030 MYL6BP14649 208 aa21.06■□□□□ 0.96
MCF2L-208ENST00000397030 PLEKHO1Q53GL0 409 aaPredicted RBP21.05■□□□□ 0.96
MCF2L-208ENST00000397030 DDX11L8A8MPP1 907 aa21.05■□□□□ 0.96
MCF2L-208ENST00000397030 MATR3P43243 847 aaKnown RBP eCLIP21.04■□□□□ 0.96
MCF2L-208ENST00000397030 PDILTQ8N807 584 aa21.04■□□□□ 0.96
MCF2L-208ENST00000397030 ZHX3Q9H4I2 956 aa21.04■□□□□ 0.96
MCF2L-208ENST00000397030 TTLL12Q14166 644 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-208ENST00000397030 DDX19BQ9UMR2 479 aa21.04■□□□□ 0.96
MCF2L-208ENST00000397030 SART3Q15020 963 aaKnown RBP21.04■□□□□ 0.96
MCF2L-208ENST00000397030 GNL3LQ9NVN8 582 aaKnown RBP21.04■□□□□ 0.96
MCF2L-208ENST00000397030 HSP90AB4PQ58FF6 505 aa21.03■□□□□ 0.96
MCF2L-208ENST00000397030 DZIP1LQ8IYY4 767 aaKnown RBP21.03■□□□□ 0.96
MCF2L-208ENST00000397030 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-208ENST00000397030 SPDYE4A6NLX3 237 aa21.03■□□□□ 0.96
MCF2L-208ENST00000397030 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
MCF2L-208ENST00000397030 GNAI1P63096 354 aa21.01■□□□□ 0.95
MCF2L-208ENST00000397030 SASS6Q6UVJ0 657 aa21.01■□□□□ 0.95
MCF2L-208ENST00000397030 SIL1Q9H173 461 aa21.01■□□□□ 0.95
MCF2L-208ENST00000397030 MIA2Q96PC5 1412 aa21■□□□□ 0.95
MCF2L-208ENST00000397030 EXOC6Q8TAG9 804 aa21■□□□□ 0.95
MCF2L-208ENST00000397030 SYCP1Q15431 976 aa20.99■□□□□ 0.95
MCF2L-208ENST00000397030 CENPQQ7L2Z9 268 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-208ENST00000397030 USP47Q96K76 1375 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 OLFM4Q6UX06 510 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 LNPKQ9C0E8 428 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 CCDC73Q6ZRK6 1079 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 RUNDC1Q96C34 613 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 ADAMTS2O95450 1211 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 CCDC158Q5M9N0 1113 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 RUFY1Q96T51 708 aa20.98■□□□□ 0.95
MCF2L-208ENST00000397030 GPS2Q13227 327 aa20.97■□□□□ 0.95
MCF2L-208ENST00000397030 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
MCF2L-208ENST00000397030 INTS3Q68E01 1043 aaKnown RBP20.97■□□□□ 0.95
MCF2L-208ENST00000397030 BRPF1P55201 1214 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-208ENST00000397030 GRM1Q13255 1194 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 MPHOSPH8Q99549 860 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 PDCL3Q9H2J4 239 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 CNTROBQ8N137 903 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 PIBF1Q8WXW3 757 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 CCDC97Q96F63 343 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-208ENST00000397030 CCDC30Q5VVM6 783 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 CCDC85AQ96PX6 553 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-208ENST00000397030 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
MCF2L-208ENST00000397030 CAGE1Q8TC20 777 aa20.95■□□□□ 0.95
MCF2L-208ENST00000397030 FANCD2Q9BXW9 1451 aa20.95■□□□□ 0.94
MCF2L-208ENST00000397030 SURF6O75683 361 aaKnown RBP20.94■□□□□ 0.94
MCF2L-208ENST00000397030 IPO9Q96P70 1041 aaKnown RBP20.94■□□□□ 0.94
MCF2L-208ENST00000397030 MAP4K4O95819 1239 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-208ENST00000397030 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
MCF2L-208ENST00000397030 WDR70Q9NW82 654 aa20.93■□□□□ 0.94
MCF2L-208ENST00000397030 WDR78Q5VTH9 848 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms