RNA–Protein interactions for RNA: ENST00000397023.5

PPARG-208, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 5

Gene PPARG, Length 2,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-208ENST00000397023 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
PPARG-208ENST00000397023 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
PPARG-208ENST00000397023 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
PPARG-208ENST00000397023 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
PPARG-208ENST00000397023 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
PPARG-208ENST00000397023 SHPRHQ149N8 1683 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
PPARG-208ENST00000397023 MRE11P49959 708 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 MCM4P33991 863 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 CCDC27Q2M243 656 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 EFCAB2Q5VUJ9 269 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 COG6Q9Y2V7 657 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 ADGRL1O94910 1474 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 ERVK-7P63135 1459 aa12.25□□□□□ -0.45
PPARG-208ENST00000397023 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
PPARG-208ENST00000397023 ARAP3Q8WWN8 1544 aa12.24□□□□□ -0.45
PPARG-208ENST00000397023 SEC24BO95487 1268 aa12.23□□□□□ -0.45
PPARG-208ENST00000397023 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
PPARG-208ENST00000397023 RUNDC1Q96C34 613 aa12.23□□□□□ -0.45
PPARG-208ENST00000397023 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
PPARG-208ENST00000397023 TRAPPC8Q9Y2L5 1435 aa12.23□□□□□ -0.45
PPARG-208ENST00000397023 PANK1Q8TE04 598 aa12.22□□□□□ -0.45
PPARG-208ENST00000397023 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
PPARG-208ENST00000397023 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
PPARG-208ENST00000397023 IFT172Q9UG01 1749 aa12.22□□□□□ -0.45
PPARG-208ENST00000397023 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
PPARG-208ENST00000397023 PDZRN3Q9UPQ7 1066 aa12.21□□□□□ -0.45
PPARG-208ENST00000397023 VWDEQ8N2E2 1590 aa12.21□□□□□ -0.45
PPARG-208ENST00000397023 KIF1BO60333 1816 aa12.21□□□□□ -0.45
PPARG-208ENST00000397023 XRCC6P12956 609 aaKnown RBP eCLIP12.21□□□□□ -0.46
PPARG-208ENST00000397023 RRP9O43818 475 aaKnown RBP12.2□□□□□ -0.46
PPARG-208ENST00000397023 HSCBQ8IWL3 235 aa12.2□□□□□ -0.46
PPARG-208ENST00000397023 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
PPARG-208ENST00000397023 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
PPARG-208ENST00000397023 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
PPARG-208ENST00000397023 C22orf23Q9BZE7 217 aa12.19□□□□□ -0.46
PPARG-208ENST00000397023 NCOA3Q9Y6Q9 1424 aa12.19□□□□□ -0.46
PPARG-208ENST00000397023 TRAK2O60296 914 aa12.18□□□□□ -0.46
PPARG-208ENST00000397023 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
PPARG-208ENST00000397023 SKOR2Q2VWA4 1001 aaPredicted RBP12.18□□□□□ -0.46
PPARG-208ENST00000397023 CFAP53Q96M91 514 aa12.18□□□□□ -0.46
PPARG-208ENST00000397023 ZC3H13Q5T200 1668 aaKnown RBP12.18□□□□□ -0.46
PPARG-208ENST00000397023 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
PPARG-208ENST00000397023 NRXN1Q9ULB1 1477 aa12.18□□□□□ -0.46
PPARG-208ENST00000397023 NSD2O96028 1365 aa12.18□□□□□ -0.46
PPARG-208ENST00000397023 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
PPARG-208ENST00000397023 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
PPARG-208ENST00000397023 PCDHB15Q9Y5E8 787 aa12.18□□□□□ -0.46
PPARG-208ENST00000397023 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
PPARG-208ENST00000397023 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
PPARG-208ENST00000397023 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
PPARG-208ENST00000397023 INO80Q9ULG1 1556 aaPredicted RBP12.17□□□□□ -0.46
PPARG-208ENST00000397023 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
PPARG-208ENST00000397023 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
PPARG-208ENST00000397023 SNX21Q969T3 373 aa12.16□□□□□ -0.46
PPARG-208ENST00000397023 ABCA9Q8IUA7 1624 aa12.16□□□□□ -0.46
PPARG-208ENST00000397023 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
PPARG-208ENST00000397023 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
PPARG-208ENST00000397023 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
PPARG-208ENST00000397023 GRPEL1Q9HAV7 217 aa12.15□□□□□ -0.46
PPARG-208ENST00000397023 REREQ9P2R6 1566 aa12.15□□□□□ -0.47
PPARG-208ENST00000397023 NSD3Q9BZ95 1437 aa12.15□□□□□ -0.47
PPARG-208ENST00000397023 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.47
PPARG-208ENST00000397023 TCP11L2Q8N4U5 519 aa12.15□□□□□ -0.47
PPARG-208ENST00000397023 AFAP1Q8N556 730 aa12.15□□□□□ -0.47
PPARG-208ENST00000397023 PUS7Q96PZ0 661 aaKnown RBP12.15□□□□□ -0.47
PPARG-208ENST00000397023 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.47
PPARG-208ENST00000397023 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.47
PPARG-208ENST00000397023 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
PPARG-208ENST00000397023 QRICH2Q9H0J4 1663 aa12.14□□□□□ -0.47
PPARG-208ENST00000397023 RBM25P49756 843 aaKnown RBP12.13□□□□□ -0.47
PPARG-208ENST00000397023 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
PPARG-208ENST00000397023 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
PPARG-208ENST00000397023 ESPNB1AK53 854 aa12.13□□□□□ -0.47
PPARG-208ENST00000397023 TPM2P07951 284 aa12.13□□□□□ -0.47
PPARG-208ENST00000397023 RLBP1P12271 317 aa12.13□□□□□ -0.47
PPARG-208ENST00000397023 FANCAO15360 1455 aa12.13□□□□□ -0.47
PPARG-208ENST00000397023 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
PPARG-208ENST00000397023 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
PPARG-208ENST00000397023 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
PPARG-208ENST00000397023 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
PPARG-208ENST00000397023 DDIT3P35638 169 aa12.11□□□□□ -0.47
PPARG-208ENST00000397023 CHMP4BQ9H444 224 aaKnown RBP12.11□□□□□ -0.47
PPARG-208ENST00000397023 IL16Q14005 1332 aa12.11□□□□□ -0.47
PPARG-208ENST00000397023 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
PPARG-208ENST00000397023 MFAP1P55081 439 aaKnown RBP12.11□□□□□ -0.47
PPARG-208ENST00000397023 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
PPARG-208ENST00000397023 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
PPARG-208ENST00000397023 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
PPARG-208ENST00000397023 LMTK2Q8IWU2 1503 aa12.1□□□□□ -0.47
PPARG-208ENST00000397023 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
PPARG-208ENST00000397023 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
PPARG-208ENST00000397023 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
PPARG-208ENST00000397023 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
PPARG-208ENST00000397023 GZF1Q9H116 711 aaPredicted RBP12.09□□□□□ -0.47
PPARG-208ENST00000397023 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
PPARG-208ENST00000397023 IPO8O15397 1037 aaKnown RBP12.08□□□□□ -0.48
PPARG-208ENST00000397023 CCDC173Q0VFZ6 552 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms