RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 STK26Q9P289 416 aa19.95■□□□□ 0.78
CBX3-202ENST00000396386 ANKRD36BQ8N2N9 1353 aa19.95■□□□□ 0.78
CBX3-202ENST00000396386 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
CBX3-202ENST00000396386 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
CBX3-202ENST00000396386 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
CBX3-202ENST00000396386 TNRQ92752 1358 aa19.93■□□□□ 0.78
CBX3-202ENST00000396386 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
CBX3-202ENST00000396386 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
CBX3-202ENST00000396386 PPP4R2Q9NY27 417 aa19.92■□□□□ 0.78
CBX3-202ENST00000396386 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
CBX3-202ENST00000396386 NSD2O96028 1365 aa19.91■□□□□ 0.78
CBX3-202ENST00000396386 SHPRHQ149N8 1683 aa19.91■□□□□ 0.78
CBX3-202ENST00000396386 ATAD2Q6PL18 1390 aa19.91■□□□□ 0.78
CBX3-202ENST00000396386 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
CBX3-202ENST00000396386 SALL2Q9Y467 1007 aaPredicted RBP19.9■□□□□ 0.78
CBX3-202ENST00000396386 PRAM1Q96QH2 718 aa19.9■□□□□ 0.78
CBX3-202ENST00000396386 POGKQ9P215 609 aa19.9■□□□□ 0.78
CBX3-202ENST00000396386 CGNL1Q0VF96 1302 aa19.89■□□□□ 0.77
CBX3-202ENST00000396386 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.89■□□□□ 0.77
CBX3-202ENST00000396386 CABP2Q9NPB3 220 aa19.89■□□□□ 0.77
CBX3-202ENST00000396386 POLR3AO14802 1390 aaPredicted RBP19.89■□□□□ 0.77
CBX3-202ENST00000396386 FER1L4A9Z1Z3 1794 aa19.88■□□□□ 0.77
CBX3-202ENST00000396386 MINK1Q8N4C8 1332 aaPredicted RBP19.87■□□□□ 0.77
CBX3-202ENST00000396386 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
CBX3-202ENST00000396386 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
CBX3-202ENST00000396386 C3P01024 1663 aa19.86■□□□□ 0.77
CBX3-202ENST00000396386 KIF20BQ96Q89 1820 aa19.86■□□□□ 0.77
CBX3-202ENST00000396386 A0A1W2PP64 1363 aa19.85■□□□□ 0.77
CBX3-202ENST00000396386 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
CBX3-202ENST00000396386 ABCC11Q96J66 1382 aa19.84■□□□□ 0.77
CBX3-202ENST00000396386 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
CBX3-202ENST00000396386 CPS1P31327 1500 aa19.84■□□□□ 0.77
CBX3-202ENST00000396386 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
CBX3-202ENST00000396386 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
CBX3-202ENST00000396386 HDGFP51858 240 aaKnown RBP19.82■□□□□ 0.76
CBX3-202ENST00000396386 CD163L1Q9NR16 1453 aa19.81■□□□□ 0.76
CBX3-202ENST00000396386 TMEM2Q9UHN6 1383 aa19.81■□□□□ 0.76
CBX3-202ENST00000396386 CDCA7LQ96GN5 454 aa19.81■□□□□ 0.76
CBX3-202ENST00000396386 MED14O60244 1454 aa19.8■□□□□ 0.76
CBX3-202ENST00000396386 RRP1P56182 461 aaKnown RBP19.79■□□□□ 0.76
CBX3-202ENST00000396386 TERF2IPQ9NYB0 399 aa19.79■□□□□ 0.76
CBX3-202ENST00000396386 TECPR2O15040 1411 aa19.79■□□□□ 0.76
CBX3-202ENST00000396386 ATP7BP35670 1465 aa19.79■□□□□ 0.76
CBX3-202ENST00000396386 ZNF521Q96K83 1311 aa19.78■□□□□ 0.76
CBX3-202ENST00000396386 METP08581 1390 aa19.77■□□□□ 0.76
CBX3-202ENST00000396386 FAM135BQ49AJ0 1406 aa19.77■□□□□ 0.76
CBX3-202ENST00000396386 CDK19Q9BWU1 502 aa19.77■□□□□ 0.76
CBX3-202ENST00000396386 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
CBX3-202ENST00000396386 CCDC146Q8IYE0 955 aa19.76■□□□□ 0.75
CBX3-202ENST00000396386 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
CBX3-202ENST00000396386 B4GALNT3Q6L9W6 998 aa19.75■□□□□ 0.75
CBX3-202ENST00000396386 HDGFL2Q7Z4V5 671 aaPredicted RBP19.75■□□□□ 0.75
CBX3-202ENST00000396386 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
CBX3-202ENST00000396386 IQSEC2Q5JU85 1478 aa19.74■□□□□ 0.75
CBX3-202ENST00000396386 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
CBX3-202ENST00000396386 WAPLQ7Z5K2 1190 aa19.73■□□□□ 0.75
CBX3-202ENST00000396386 PLEKHG1Q9ULL1 1385 aa19.73■□□□□ 0.75
CBX3-202ENST00000396386 ITSN1Q15811 1721 aa19.73■□□□□ 0.75
CBX3-202ENST00000396386 ADGRB2O60241 1585 aa19.72■□□□□ 0.75
CBX3-202ENST00000396386 SLIT1O75093 1534 aa19.72■□□□□ 0.75
CBX3-202ENST00000396386 ADAMTS13Q76LX8 1427 aa19.72■□□□□ 0.75
CBX3-202ENST00000396386 MON2Q7Z3U7 1717 aa19.72■□□□□ 0.75
CBX3-202ENST00000396386 APAF1O14727 1248 aa19.71■□□□□ 0.75
CBX3-202ENST00000396386 MTHFSP49914 203 aa19.71■□□□□ 0.75
CBX3-202ENST00000396386 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
CBX3-202ENST00000396386 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
CBX3-202ENST00000396386 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
CBX3-202ENST00000396386 ARHGAP23Q9P227 1491 aa19.7■□□□□ 0.74
CBX3-202ENST00000396386 DUSP27Q5VZP5 1158 aa19.69■□□□□ 0.74
CBX3-202ENST00000396386 COL3A1P02461 1466 aaPredicted RBP19.69■□□□□ 0.74
CBX3-202ENST00000396386 CABP1Q9NZU7 370 aa19.68■□□□□ 0.74
CBX3-202ENST00000396386 DIP2AQ14689 1571 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 GGNBP2Q9H3C7 697 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 TOPAZ1Q8N9V7 1692 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 WASLO00401 505 aaPredicted RBP19.67■□□□□ 0.74
CBX3-202ENST00000396386 CEBPAP49715 358 aaPredicted RBP19.67■□□□□ 0.74
CBX3-202ENST00000396386 SLFN5Q08AF3 891 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 TXNDC2Q86VQ3 553 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 CCDC136Q96JN2 1154 aa19.67■□□□□ 0.74
CBX3-202ENST00000396386 FYB1O15117 783 aa19.66■□□□□ 0.74
CBX3-202ENST00000396386 RUNDC1Q96C34 613 aa19.66■□□□□ 0.74
CBX3-202ENST00000396386 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
CBX3-202ENST00000396386 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
CBX3-202ENST00000396386 CPSF1Q10570 1443 aaKnown RBP19.65■□□□□ 0.74
CBX3-202ENST00000396386 EDC4Q6P2E9 1401 aaKnown RBP19.65■□□□□ 0.74
CBX3-202ENST00000396386 RIMS1Q86UR5 1692 aaKnown RBP19.64■□□□□ 0.74
CBX3-202ENST00000396386 TRMT2AQ8IZ69 625 aaKnown RBP19.64■□□□□ 0.73
CBX3-202ENST00000396386 E9PSI1 815 aa19.63■□□□□ 0.73
CBX3-202ENST00000396386 ROBO2Q9HCK4 1378 aa19.63■□□□□ 0.73
CBX3-202ENST00000396386 ADAMTSL3P82987 1691 aa19.63■□□□□ 0.73
CBX3-202ENST00000396386 LTKP29376 864 aa19.62■□□□□ 0.73
CBX3-202ENST00000396386 EID1Q9Y6B2 187 aa19.62■□□□□ 0.73
CBX3-202ENST00000396386 EXOC6Q8TAG9 804 aa19.61■□□□□ 0.73
CBX3-202ENST00000396386 CEP170BQ9Y4F5 1589 aaPredicted RBP19.61■□□□□ 0.73
CBX3-202ENST00000396386 NRKQ7Z2Y5 1582 aa19.6■□□□□ 0.73
CBX3-202ENST00000396386 U2AF1L5P0DN76 240 aaPredicted RBP19.58■□□□□ 0.73
CBX3-202ENST00000396386 U2AF1Q01081 240 aaKnown RBP eCLIP19.58■□□□□ 0.73
CBX3-202ENST00000396386 WWC1Q8IX03 1113 aa19.58■□□□□ 0.73
CBX3-202ENST00000396386 NUDT16Q96DE0 195 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms