RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 SMC4Q9NTJ3 1288 aa22.91■■□□□ 1.26
HERPUD2-202ENST00000396081 ATP10AO60312 1499 aa22.91■■□□□ 1.26
HERPUD2-202ENST00000396081 TSR2Q969E8 191 aaKnown RBP22.91■■□□□ 1.26
HERPUD2-202ENST00000396081 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 MTHFSP49914 203 aa22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 WDR63Q8IWG1 891 aa22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 ERBB4Q15303 1308 aa22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 U2AF1L5P0DN76 240 aaPredicted RBP22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 U2AF1Q01081 240 aaKnown RBP eCLIP22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 POLR3AO14802 1390 aaPredicted RBP22.9■■□□□ 1.26
HERPUD2-202ENST00000396081 MADDQ8WXG6 1647 aa22.89■■□□□ 1.26
HERPUD2-202ENST00000396081 ZMYND15Q9H091 742 aa22.89■■□□□ 1.26
HERPUD2-202ENST00000396081 SLC12A5Q9H2X9 1139 aa22.89■■□□□ 1.26
HERPUD2-202ENST00000396081 PREX2Q70Z35 1606 aa22.89■■□□□ 1.25
HERPUD2-202ENST00000396081 RRP9O43818 475 aaKnown RBP22.88■■□□□ 1.25
HERPUD2-202ENST00000396081 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
HERPUD2-202ENST00000396081 MAST1Q9Y2H9 1570 aa22.86■■□□□ 1.25
HERPUD2-202ENST00000396081 TNPO1Q92973 898 aaKnown RBP22.86■■□□□ 1.25
HERPUD2-202ENST00000396081 CFAP53Q96M91 514 aa22.86■■□□□ 1.25
HERPUD2-202ENST00000396081 DUOX2Q9NRD8 1548 aa22.86■■□□□ 1.25
HERPUD2-202ENST00000396081 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
HERPUD2-202ENST00000396081 GAS2L3Q86XJ1 694 aa22.85■■□□□ 1.25
HERPUD2-202ENST00000396081 ADGRF5Q8IZF2 1346 aa22.85■■□□□ 1.25
HERPUD2-202ENST00000396081 CHGAP10645 457 aaKnown RBP22.85■■□□□ 1.25
HERPUD2-202ENST00000396081 NSD3Q9BZ95 1437 aa22.85■■□□□ 1.25
HERPUD2-202ENST00000396081 TRAK1Q9UPV9 953 aa22.84■■□□□ 1.25
HERPUD2-202ENST00000396081 ZMYM3Q14202 1370 aa22.84■■□□□ 1.25
HERPUD2-202ENST00000396081 SCAPERQ9BY12 1400 aa22.84■■□□□ 1.25
HERPUD2-202ENST00000396081 MYOM1P52179 1685 aa22.84■■□□□ 1.25
HERPUD2-202ENST00000396081 LNPKQ9C0E8 428 aa22.84■■□□□ 1.25
HERPUD2-202ENST00000396081 SLC24A1O60721 1099 aa22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 GBP4Q96PP9 640 aa22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 KDM5AP29375 1690 aaKnown RBP22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 ERVK-7P63135 1459 aa22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 EXOSC9Q06265 439 aaKnown RBP22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 ZNF692Q9BU19 519 aaPredicted RBP22.83■■□□□ 1.25
HERPUD2-202ENST00000396081 TRIM27P14373 513 aa22.83■■□□□ 1.24
HERPUD2-202ENST00000396081 AFAP1Q8N556 730 aa22.82■■□□□ 1.24
HERPUD2-202ENST00000396081 EFCAB2Q5VUJ9 269 aa22.81■■□□□ 1.24
HERPUD2-202ENST00000396081 RTEL1-TNFRSF6BF6WH68 1400 aa22.81■■□□□ 1.24
HERPUD2-202ENST00000396081 TTC37Q6PGP7 1564 aa22.81■■□□□ 1.24
HERPUD2-202ENST00000396081 SPAG9O60271 1321 aaKnown RBP22.8■■□□□ 1.24
HERPUD2-202ENST00000396081 DDX19BQ9UMR2 479 aa22.8■■□□□ 1.24
HERPUD2-202ENST00000396081 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
HERPUD2-202ENST00000396081 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
HERPUD2-202ENST00000396081 SSH1Q8WYL5 1049 aa22.79■■□□□ 1.24
HERPUD2-202ENST00000396081 NOB1Q9ULX3 412 aaKnown RBP22.78■■□□□ 1.24
HERPUD2-202ENST00000396081 HDAC1Q13547 482 aaPredicted RBP22.77■■□□□ 1.24
HERPUD2-202ENST00000396081 ISY1Q9ULR0 285 aaKnown RBP22.77■■□□□ 1.24
HERPUD2-202ENST00000396081 TMEM57Q8N5G2 664 aa22.77■■□□□ 1.24
HERPUD2-202ENST00000396081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.76■■□□□ 1.23
HERPUD2-202ENST00000396081 KIF3BO15066 747 aa22.76■■□□□ 1.23
HERPUD2-202ENST00000396081 ATF7IPQ6VMQ6 1270 aa22.76■■□□□ 1.23
HERPUD2-202ENST00000396081 CCDC27Q2M243 656 aa22.74■■□□□ 1.23
HERPUD2-202ENST00000396081 ANP32BQ92688 251 aaKnown RBP22.74■■□□□ 1.23
HERPUD2-202ENST00000396081 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
HERPUD2-202ENST00000396081 SMC5Q8IY18 1101 aa22.74■■□□□ 1.23
HERPUD2-202ENST00000396081 CEP152O94986 1710 aa22.73■■□□□ 1.23
HERPUD2-202ENST00000396081 SKOR2Q2VWA4 1001 aaPredicted RBP22.73■■□□□ 1.23
HERPUD2-202ENST00000396081 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
HERPUD2-202ENST00000396081 RBM25P49756 843 aaKnown RBP22.72■■□□□ 1.23
HERPUD2-202ENST00000396081 RAB3GAP1Q15042 981 aa22.72■■□□□ 1.23
HERPUD2-202ENST00000396081 TMEM132EQ6IEE7 984 aa22.72■■□□□ 1.23
HERPUD2-202ENST00000396081 KIAA1211Q6ZU35 1233 aa22.72■■□□□ 1.23
HERPUD2-202ENST00000396081 CD2BP2O95400 341 aaKnown RBP22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 NCLP19338 710 aaKnown RBP22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 SNX21Q969T3 373 aa22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 NASPP49321 788 aaPredicted RBP22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 CLTCL1P53675 1640 aa22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 SSFA2P28290 1259 aa22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 DDIT3P35638 169 aa22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 ANKRD45Q5TZF3 282 aa22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 CIZ1Q9ULV3 898 aaPredicted RBP22.71■■□□□ 1.23
HERPUD2-202ENST00000396081 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.22
HERPUD2-202ENST00000396081 DDX49Q9Y6V7 483 aaKnown RBP22.7■■□□□ 1.22
HERPUD2-202ENST00000396081 TRPM2O94759 1503 aa22.7■■□□□ 1.22
HERPUD2-202ENST00000396081 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
HERPUD2-202ENST00000396081 KANK1Q14678 1352 aa22.7■■□□□ 1.22
HERPUD2-202ENST00000396081 IQSEC2Q5JU85 1478 aa22.69■■□□□ 1.22
HERPUD2-202ENST00000396081 PTPRTO14522 1441 aa22.69■■□□□ 1.22
HERPUD2-202ENST00000396081 CHD1LQ86WJ1 897 aa22.68■■□□□ 1.22
HERPUD2-202ENST00000396081 TPM2P07951 284 aa22.67■■□□□ 1.22
HERPUD2-202ENST00000396081 NUCB1Q02818 461 aa22.67■■□□□ 1.22
HERPUD2-202ENST00000396081 ZBTB40Q9NUA8 1239 aa22.67■■□□□ 1.22
HERPUD2-202ENST00000396081 MSNP26038 577 aaKnown RBP22.67■■□□□ 1.22
HERPUD2-202ENST00000396081 C1orf115Q9H7X2 142 aa22.66■■□□□ 1.22
HERPUD2-202ENST00000396081 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
HERPUD2-202ENST00000396081 K7ELQ4 463 aaPredicted RBP22.66■■□□□ 1.22
HERPUD2-202ENST00000396081 TMPOP42166 694 aaKnown RBP22.66■■□□□ 1.22
HERPUD2-202ENST00000396081 CCDC173Q0VFZ6 552 aa22.65■■□□□ 1.22
HERPUD2-202ENST00000396081 IPO8O15397 1037 aaKnown RBP22.65■■□□□ 1.22
HERPUD2-202ENST00000396081 CT47B1P0C2W7 299 aaPredicted RBP22.65■■□□□ 1.22
HERPUD2-202ENST00000396081 UGGT1Q9NYU2 1555 aa22.65■■□□□ 1.22
HERPUD2-202ENST00000396081 NCOA3Q9Y6Q9 1424 aa22.65■■□□□ 1.22
HERPUD2-202ENST00000396081 RBM10P98175 930 aaKnown RBP22.64■■□□□ 1.22
HERPUD2-202ENST00000396081 GAS2L2Q8NHY3 880 aa22.64■■□□□ 1.22
HERPUD2-202ENST00000396081 SHPRHQ149N8 1683 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms