RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CABP2Q9NPB3 220 aa16.22■□□□□ 0.19
ITGB1-202ENST00000396033 MINK1Q8N4C8 1332 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-202ENST00000396033 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.2■□□□□ 0.18
ITGB1-202ENST00000396033 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
ITGB1-202ENST00000396033 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
ITGB1-202ENST00000396033 MSH5O43196 834 aa16.19■□□□□ 0.18
ITGB1-202ENST00000396033 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-202ENST00000396033 ANKRD36BQ8N2N9 1353 aa16.19■□□□□ 0.18
ITGB1-202ENST00000396033 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
ITGB1-202ENST00000396033 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
ITGB1-202ENST00000396033 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
ITGB1-202ENST00000396033 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
ITGB1-202ENST00000396033 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
ITGB1-202ENST00000396033 CGNL1Q0VF96 1302 aa16.17■□□□□ 0.18
ITGB1-202ENST00000396033 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
ITGB1-202ENST00000396033 PDE3BQ13370 1112 aa16.16■□□□□ 0.18
ITGB1-202ENST00000396033 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
ITGB1-202ENST00000396033 DLC1Q96QB1 1528 aa16.16■□□□□ 0.18
ITGB1-202ENST00000396033 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
ITGB1-202ENST00000396033 UBR1Q8IWV7 1749 aa16.15■□□□□ 0.18
ITGB1-202ENST00000396033 A0A1W2PP64 1363 aa16.13■□□□□ 0.17
ITGB1-202ENST00000396033 TMEM2Q9UHN6 1383 aa16.13■□□□□ 0.17
ITGB1-202ENST00000396033 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-202ENST00000396033 NSD2O96028 1365 aa16.12■□□□□ 0.17
ITGB1-202ENST00000396033 ABCC11Q96J66 1382 aa16.12■□□□□ 0.17
ITGB1-202ENST00000396033 CEBPAP49715 358 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-202ENST00000396033 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
ITGB1-202ENST00000396033 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
ITGB1-202ENST00000396033 METP08581 1390 aa16.12■□□□□ 0.17
ITGB1-202ENST00000396033 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
ITGB1-202ENST00000396033 RNF123Q5XPI4 1314 aa16.11■□□□□ 0.17
ITGB1-202ENST00000396033 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
ITGB1-202ENST00000396033 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
ITGB1-202ENST00000396033 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
ITGB1-202ENST00000396033 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
ITGB1-202ENST00000396033 FER1L4A9Z1Z3 1794 aa16.11■□□□□ 0.17
ITGB1-202ENST00000396033 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
ITGB1-202ENST00000396033 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
ITGB1-202ENST00000396033 C3P01024 1663 aa16.1■□□□□ 0.17
ITGB1-202ENST00000396033 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
ITGB1-202ENST00000396033 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
ITGB1-202ENST00000396033 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.16
ITGB1-202ENST00000396033 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
ITGB1-202ENST00000396033 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
ITGB1-202ENST00000396033 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
ITGB1-202ENST00000396033 TXNDC2Q86VQ3 553 aa16.06■□□□□ 0.16
ITGB1-202ENST00000396033 CABP1Q9NZU7 370 aa16.05■□□□□ 0.16
ITGB1-202ENST00000396033 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
ITGB1-202ENST00000396033 TECPR2O15040 1411 aa16.05■□□□□ 0.16
ITGB1-202ENST00000396033 MTHFSP49914 203 aa16.05■□□□□ 0.16
ITGB1-202ENST00000396033 CPS1P31327 1500 aa16.05■□□□□ 0.16
ITGB1-202ENST00000396033 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
ITGB1-202ENST00000396033 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
ITGB1-202ENST00000396033 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
ITGB1-202ENST00000396033 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
ITGB1-202ENST00000396033 LTKP29376 864 aa16.04■□□□□ 0.16
ITGB1-202ENST00000396033 GGNBP2Q9H3C7 697 aa16.04■□□□□ 0.16
ITGB1-202ENST00000396033 APAF1O14727 1248 aa16.03■□□□□ 0.16
ITGB1-202ENST00000396033 RRP1P56182 461 aaKnown RBP16.03■□□□□ 0.16
ITGB1-202ENST00000396033 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
ITGB1-202ENST00000396033 WASLO00401 505 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-202ENST00000396033 EID1Q9Y6B2 187 aa16.02■□□□□ 0.16
ITGB1-202ENST00000396033 ATP7BP35670 1465 aa16.02■□□□□ 0.16
ITGB1-202ENST00000396033 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.16
ITGB1-202ENST00000396033 SIRT1Q96EB6 747 aa16.02■□□□□ 0.15
ITGB1-202ENST00000396033 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.15
ITGB1-202ENST00000396033 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
ITGB1-202ENST00000396033 MED14O60244 1454 aa16.01■□□□□ 0.15
ITGB1-202ENST00000396033 FYB1O15117 783 aa16.01■□□□□ 0.15
ITGB1-202ENST00000396033 SLIT1O75093 1534 aa16■□□□□ 0.15
ITGB1-202ENST00000396033 KIF20BQ96Q89 1820 aa16■□□□□ 0.15
ITGB1-202ENST00000396033 ROBO2Q9HCK4 1378 aa15.99■□□□□ 0.15
ITGB1-202ENST00000396033 ARHGAP23Q9P227 1491 aa15.99■□□□□ 0.15
ITGB1-202ENST00000396033 PPIP5K1Q6PFW1 1433 aa15.99■□□□□ 0.15
ITGB1-202ENST00000396033 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
ITGB1-202ENST00000396033 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
ITGB1-202ENST00000396033 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
ITGB1-202ENST00000396033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.159e-7■■■□□ 17.5
ITGB1-202ENST00000396033 THEMISQ8N1K5 641 aaPredicted RBP15.97■□□□□ 0.15
ITGB1-202ENST00000396033 RUNDC1Q96C34 613 aa15.96■□□□□ 0.15
ITGB1-202ENST00000396033 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
ITGB1-202ENST00000396033 SLFN5Q08AF3 891 aa15.96■□□□□ 0.15
ITGB1-202ENST00000396033 RIMS1Q86UR5 1692 aaKnown RBP15.94■□□□□ 0.14
ITGB1-202ENST00000396033 CPSF1Q10570 1443 aaKnown RBP15.94■□□□□ 0.14
ITGB1-202ENST00000396033 CDC42BPGQ6DT37 1551 aa15.94■□□□□ 0.14
ITGB1-202ENST00000396033 EDC4Q6P2E9 1401 aaKnown RBP15.94■□□□□ 0.14
ITGB1-202ENST00000396033 PTPRUQ92729 1446 aa15.94■□□□□ 0.14
ITGB1-202ENST00000396033 IQSEC2Q5JU85 1478 aa15.94■□□□□ 0.14
ITGB1-202ENST00000396033 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
ITGB1-202ENST00000396033 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
ITGB1-202ENST00000396033 ADGRB2O60241 1585 aa15.94■□□□□ 0.14
ITGB1-202ENST00000396033 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
ITGB1-202ENST00000396033 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
ITGB1-202ENST00000396033 COL3A1P02461 1466 aaPredicted RBP15.93■□□□□ 0.14
ITGB1-202ENST00000396033 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
ITGB1-202ENST00000396033 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
ITGB1-202ENST00000396033 E9PSI1 815 aa15.92■□□□□ 0.14
ITGB1-202ENST00000396033 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
ITGB1-202ENST00000396033 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
ITGB1-202ENST00000396033 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms