RNA–Protein interactions for RNA: ENST00000395965.7

FAM172A-201, Transcript of family with sequence similarity 172 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM172A, Length 4,312 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-201ENST00000395965 GOLGA6L7A0A1B0GV03 622 aa12.42□□□□□ -0.42
FAM172A-201ENST00000395965 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
FAM172A-201ENST00000395965 SEC24BO95487 1268 aa12.41□□□□□ -0.42
FAM172A-201ENST00000395965 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
FAM172A-201ENST00000395965 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
FAM172A-201ENST00000395965 SKIDA1Q1XH10 827 aa12.41□□□□□ -0.42
FAM172A-201ENST00000395965 CCP110O43303 1012 aa12.4□□□□□ -0.42
FAM172A-201ENST00000395965 PES1O00541 588 aaKnown RBP12.4□□□□□ -0.42
FAM172A-201ENST00000395965 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
FAM172A-201ENST00000395965 CLUAP1Q96AJ1 413 aa12.4□□□□□ -0.43
FAM172A-201ENST00000395965 ERLIN1O75477 346 aa12.39□□□□□ -0.43
FAM172A-201ENST00000395965 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.43
FAM172A-201ENST00000395965 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
FAM172A-201ENST00000395965 XRCC6P12956 609 aaKnown RBP eCLIP12.39□□□□□ -0.43
FAM172A-201ENST00000395965 PKD2Q13563 968 aa12.39□□□□□ -0.43
FAM172A-201ENST00000395965 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
FAM172A-201ENST00000395965 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
FAM172A-201ENST00000395965 CENPHQ9H3R5 247 aa12.39□□□□□ -0.43
FAM172A-201ENST00000395965 MCM5P33992 734 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 PAIP2Q9BPZ3 127 aaKnown RBP12.38□□□□□ -0.43
FAM172A-201ENST00000395965 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 MNAT1P51948 309 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
FAM172A-201ENST00000395965 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 TMCO3Q6UWJ1 677 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 E9PCH4 1651 aa12.38□□□□□ -0.43
FAM172A-201ENST00000395965 TTLL5Q6EMB2 1281 aa12.37□□□□□ -0.43
FAM172A-201ENST00000395965 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
FAM172A-201ENST00000395965 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
FAM172A-201ENST00000395965 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
FAM172A-201ENST00000395965 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 REC8O95072 547 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 PRIMPOLQ96LW4 560 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
FAM172A-201ENST00000395965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.36□□□□□ -0.43
FAM172A-201ENST00000395965 A0A0G2JS52 829 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
FAM172A-201ENST00000395965 FAM193AP78312 1265 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
FAM172A-201ENST00000395965 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
FAM172A-201ENST00000395965 ZRSR2Q15696 482 aaKnown RBP12.36□□□□□ -0.43
FAM172A-201ENST00000395965 UBXN4Q92575 508 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 ANTXR1Q9H6X2 564 aa12.36□□□□□ -0.43
FAM172A-201ENST00000395965 IGF1RP08069 1367 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 SMC4Q9NTJ3 1288 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
FAM172A-201ENST00000395965 RBM28Q9NW13 759 aaKnown RBP12.35□□□□□ -0.43
FAM172A-201ENST00000395965 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 AAMPQ13685 434 aa12.35□□□□□ -0.43
FAM172A-201ENST00000395965 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
FAM172A-201ENST00000395965 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
FAM172A-201ENST00000395965 KDM5CP41229 1560 aa12.34□□□□□ -0.43
FAM172A-201ENST00000395965 H3BQV1 296 aa12.34□□□□□ -0.43
FAM172A-201ENST00000395965 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
FAM172A-201ENST00000395965 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
FAM172A-201ENST00000395965 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
FAM172A-201ENST00000395965 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
FAM172A-201ENST00000395965 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
FAM172A-201ENST00000395965 KRT222Q8N1A0 295 aa12.33□□□□□ -0.44
FAM172A-201ENST00000395965 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
FAM172A-201ENST00000395965 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 GOLGA6L10A6NI86 522 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 CCDC91Q7Z6B0 441 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 MPNDQ8N594 471 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
FAM172A-201ENST00000395965 NEXNQ0ZGT2 675 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 TXLNBQ8N3L3 684 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
FAM172A-201ENST00000395965 SARNPP82979 210 aaKnown RBP12.32□□□□□ -0.44
FAM172A-201ENST00000395965 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
FAM172A-201ENST00000395965 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
FAM172A-201ENST00000395965 NAT10Q9H0A0 1025 aaKnown RBP12.31□□□□□ -0.44
FAM172A-201ENST00000395965 MBD5Q9P267 1494 aa12.31□□□□□ -0.44
FAM172A-201ENST00000395965 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
FAM172A-201ENST00000395965 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
FAM172A-201ENST00000395965 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
FAM172A-201ENST00000395965 RASSF4Q9H2L5 321 aa12.3□□□□□ -0.44
FAM172A-201ENST00000395965 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
FAM172A-201ENST00000395965 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
FAM172A-201ENST00000395965 CCDC102AQ96A19 550 aa12.3□□□□□ -0.44
FAM172A-201ENST00000395965 NF2P35240 595 aa12.3□□□□□ -0.44
FAM172A-201ENST00000395965 BANK1Q8NDB2 785 aa12.3□□□□□ -0.44
FAM172A-201ENST00000395965 POLR3GO15318 223 aaPredicted RBP12.29□□□□□ -0.44
FAM172A-201ENST00000395965 CCDC73Q6ZRK6 1079 aa12.29□□□□□ -0.44
FAM172A-201ENST00000395965 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
FAM172A-201ENST00000395965 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
FAM172A-201ENST00000395965 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
FAM172A-201ENST00000395965 CFTRP13569 1480 aa12.29□□□□□ -0.44
FAM172A-201ENST00000395965 RPRD2Q5VT52 1461 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms