RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 ZMYM3Q14202 1370 aa8.37□□□□□ -1.07
AFP-202ENST00000395792 MYO5BQ9ULV0 1848 aa8.37□□□□□ -1.07
AFP-202ENST00000395792 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
AFP-202ENST00000395792 NLRP1Q9C000 1473 aa8.37□□□□□ -1.07
AFP-202ENST00000395792 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
AFP-202ENST00000395792 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
AFP-202ENST00000395792 NPC1L1Q9UHC9 1359 aa8.36□□□□□ -1.07
AFP-202ENST00000395792 A2ML1A8K2U0 1454 aa8.36□□□□□ -1.07
AFP-202ENST00000395792 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
AFP-202ENST00000395792 FGD1P98174 961 aa8.36□□□□□ -1.07
AFP-202ENST00000395792 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
AFP-202ENST00000395792 INSRP06213 1382 aa8.35□□□□□ -1.07
AFP-202ENST00000395792 DLC1Q96QB1 1528 aa8.35□□□□□ -1.07
AFP-202ENST00000395792 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
AFP-202ENST00000395792 QRICH2Q9H0J4 1663 aa8.34□□□□□ -1.07
AFP-202ENST00000395792 ARHGEF28Q8N1W1 1705 aaKnown RBP8.34□□□□□ -1.07
AFP-202ENST00000395792 FER1L4A9Z1Z3 1794 aa8.34□□□□□ -1.07
AFP-202ENST00000395792 TNRQ92752 1358 aa8.34□□□□□ -1.07
AFP-202ENST00000395792 DISP3Q9P2K9 1392 aa8.34□□□□□ -1.08
AFP-202ENST00000395792 NINLQ9Y2I6 1382 aa8.34□□□□□ -1.08
AFP-202ENST00000395792 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
AFP-202ENST00000395792 BRD4O60885 1362 aaPredicted RBP8.33□□□□□ -1.08
AFP-202ENST00000395792 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
AFP-202ENST00000395792 UBR1Q8IWV7 1749 aa8.33□□□□□ -1.08
AFP-202ENST00000395792 ALKQ9UM73 1620 aa8.33□□□□□ -1.08
AFP-202ENST00000395792 MYOM1P52179 1685 aa8.32□□□□□ -1.08
AFP-202ENST00000395792 STAG3Q9UJ98 1225 aa8.32□□□□□ -1.08
AFP-202ENST00000395792 RIMS2Q9UQ26 1411 aa8.32□□□□□ -1.08
AFP-202ENST00000395792 KNDC1Q76NI1 1749 aa8.32□□□□□ -1.08
AFP-202ENST00000395792 PARD3Q8TEW0 1356 aa8.32□□□□□ -1.08
AFP-202ENST00000395792 MYBBP1AQ9BQG0 1328 aaKnown RBP8.32□□□□□ -1.08
AFP-202ENST00000395792 C3P01024 1663 aa8.32□□□□□ -1.08
AFP-202ENST00000395792 SETD1AO15047 1707 aaKnown RBP8.32□□□□□ -1.08
AFP-202ENST00000395792 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
AFP-202ENST00000395792 USP32Q8NFA0 1604 aa8.31□□□□□ -1.08
AFP-202ENST00000395792 RAD21O60216 631 aa8.31□□□□□ -1.08
AFP-202ENST00000395792 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
AFP-202ENST00000395792 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
AFP-202ENST00000395792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■■■□ 23.4
AFP-202ENST00000395792 KCTD17Q8N5Z5 321 aa8.3□□□□□ -1.08
AFP-202ENST00000395792 ASXL1Q8IXJ9 1541 aa8.3□□□□□ -1.08
AFP-202ENST00000395792 SLIT1O75093 1534 aa8.3□□□□□ -1.08
AFP-202ENST00000395792 DIP2AQ14689 1571 aa8.29□□□□□ -1.08
AFP-202ENST00000395792 YTHDC1Q96MU7 727 aaKnown RBP8.29□□□□□ -1.08
AFP-202ENST00000395792 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
AFP-202ENST00000395792 LRPPRCP42704 1394 aaKnown RBP8.29□□□□□ -1.08
AFP-202ENST00000395792 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
AFP-202ENST00000395792 ABCC11Q96J66 1382 aa8.29□□□□□ -1.08
AFP-202ENST00000395792 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 PANK3Q9H999 370 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 TMEM2Q9UHN6 1383 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 PTPRMP28827 1452 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 ARHGAP23Q9P227 1491 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 MLECQ14165 292 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 MRS2Q9HD23 443 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 KNSTRNQ9Y448 316 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 TECPR2O15040 1411 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 FAM135BQ49AJ0 1406 aa8.28□□□□□ -1.08
AFP-202ENST00000395792 NRXN3Q9Y4C0 1643 aa8.27□□□□□ -1.08
AFP-202ENST00000395792 PLEKHG1Q9ULL1 1385 aa8.27□□□□□ -1.08
AFP-202ENST00000395792 ADAMTSL3P82987 1691 aa8.27□□□□□ -1.09
AFP-202ENST00000395792 NSD2O96028 1365 aa8.27□□□□□ -1.09
AFP-202ENST00000395792 ATAD2Q6PL18 1390 aa8.27□□□□□ -1.09
AFP-202ENST00000395792 RGS22Q8NE09 1264 aa8.27□□□□□ -1.09
AFP-202ENST00000395792 ZNF142P52746 1687 aaPredicted RBP8.26□□□□□ -1.09
AFP-202ENST00000395792 CPS1P31327 1500 aa8.26□□□□□ -1.09
AFP-202ENST00000395792 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
AFP-202ENST00000395792 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
AFP-202ENST00000395792 ZNF428Q96B54 188 aa8.25□□□□□ -1.09
AFP-202ENST00000395792 ZBED9Q6R2W3 1325 aa8.25□□□□□ -1.09
AFP-202ENST00000395792 TULP4Q9NRJ4 1543 aa8.25□□□□□ -1.09
AFP-202ENST00000395792 TICAM2Q86XR7 235 aa8.25□□□□□ -1.09
AFP-202ENST00000395792 THEMISQ8N1K5 641 aaPredicted RBP8.25□□□□□ -1.09
AFP-202ENST00000395792 MED14O60244 1454 aa8.24□□□□□ -1.09
AFP-202ENST00000395792 RBM25P49756 843 aaKnown RBP8.24□□□□□ -1.09
AFP-202ENST00000395792 PNISRQ8TF01 805 aaKnown RBP8.24□□□□□ -1.09
AFP-202ENST00000395792 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
AFP-202ENST00000395792 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
AFP-202ENST00000395792 EID1Q9Y6B2 187 aa8.24□□□□□ -1.09
AFP-202ENST00000395792 ANKRD36BQ8N2N9 1353 aa8.24□□□□□ -1.09
AFP-202ENST00000395792 SETD1BQ9UPS6 1966 aaKnown RBP8.24□□□□□ -1.09
AFP-202ENST00000395792 PIK3R4Q99570 1358 aa8.24□□□□□ -1.09
AFP-202ENST00000395792 ADGRB2O60241 1585 aa8.23□□□□□ -1.09
AFP-202ENST00000395792 TMEM132EQ6IEE7 984 aa8.23□□□□□ -1.09
AFP-202ENST00000395792 CCDC136Q96JN2 1154 aa8.23□□□□□ -1.09
AFP-202ENST00000395792 CGNL1Q0VF96 1302 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 RIMS1Q86UR5 1692 aaKnown RBP8.22□□□□□ -1.09
AFP-202ENST00000395792 CLSTN1O94985 981 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 POGKQ9P215 609 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 ANKRD26Q9UPS8 1709 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 CEP170BQ9Y4F5 1589 aaPredicted RBP8.22□□□□□ -1.09
AFP-202ENST00000395792 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 TBX22Q9Y458 520 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 ATP7BP35670 1465 aa8.22□□□□□ -1.09
AFP-202ENST00000395792 NEUROD2Q15784 382 aa8.21□□□□□ -1.09
AFP-202ENST00000395792 ZNF592Q92610 1267 aa8.21□□□□□ -1.09
AFP-202ENST00000395792 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.09
AFP-202ENST00000395792 ADAMTS13Q76LX8 1427 aa8.21□□□□□ -1.1
AFP-202ENST00000395792 HNRNPUQ00839 825 aaKnown RBP eCLIP8.21□□□□□ -1.11e-7■□□□□ 8.1
AFP-202ENST00000395792 ZNF692Q9BU19 519 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms