RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 KIF1BO60333 1816 aa20.31■□□□□ 0.84
SCAF11-203ENST00000395453 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
SCAF11-203ENST00000395453 METP08581 1390 aa20.29■□□□□ 0.84
SCAF11-203ENST00000395453 ZRANB1Q9UGI0 708 aa20.28■□□□□ 0.84
SCAF11-203ENST00000395453 USP21Q9UK80 565 aa20.28■□□□□ 0.84
SCAF11-203ENST00000395453 TRPC5Q9UL62 973 aaPredicted RBP20.27■□□□□ 0.84
SCAF11-203ENST00000395453 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
SCAF11-203ENST00000395453 RPGRIP1LQ68CZ1 1315 aa20.24■□□□□ 0.83
SCAF11-203ENST00000395453 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
SCAF11-203ENST00000395453 FNBP4Q8N3X1 1017 aaPredicted RBP20.24■□□□□ 0.83
SCAF11-203ENST00000395453 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
SCAF11-203ENST00000395453 EP400Q96L91 3159 aa20.23■□□□□ 0.83
SCAF11-203ENST00000395453 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
SCAF11-203ENST00000395453 NALCNQ8IZF0 1738 aa20.22■□□□□ 0.83
SCAF11-203ENST00000395453 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
SCAF11-203ENST00000395453 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
SCAF11-203ENST00000395453 LAMC1P11047 1609 aa20.2■□□□□ 0.82
SCAF11-203ENST00000395453 ATRNO75882 1429 aa20.19■□□□□ 0.82
SCAF11-203ENST00000395453 ORAI2Q96SN7 254 aa20.19■□□□□ 0.82
SCAF11-203ENST00000395453 ACIN1Q9UKV3 1341 aaKnown RBP20.19■□□□□ 0.82
SCAF11-203ENST00000395453 PPLO60437 1756 aa20.17■□□□□ 0.82
SCAF11-203ENST00000395453 CCDC144AA2RUR9 1427 aa20.15■□□□□ 0.82
SCAF11-203ENST00000395453 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
SCAF11-203ENST00000395453 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
SCAF11-203ENST00000395453 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
SCAF11-203ENST00000395453 COL22A1Q8NFW1 1626 aaPredicted RBP20.12■□□□□ 0.81
SCAF11-203ENST00000395453 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
SCAF11-203ENST00000395453 MYOM2P54296 1465 aa20.1■□□□□ 0.81
SCAF11-203ENST00000395453 BCL9LQ86UU0 1499 aa20.1■□□□□ 0.81
SCAF11-203ENST00000395453 NPHP3Q7Z494 1330 aa20.1■□□□□ 0.81
SCAF11-203ENST00000395453 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
SCAF11-203ENST00000395453 ADGRF5Q8IZF2 1346 aa20.09■□□□□ 0.81
SCAF11-203ENST00000395453 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
SCAF11-203ENST00000395453 ANKRD30BQ9BXX2 1392 aa20.09■□□□□ 0.81
SCAF11-203ENST00000395453 ESCO1Q5FWF5 840 aa20.07■□□□□ 0.8
SCAF11-203ENST00000395453 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
SCAF11-203ENST00000395453 RAB3GAP2Q9H2M9 1393 aa20.07■□□□□ 0.8
SCAF11-203ENST00000395453 BLMP54132 1417 aaPredicted RBP20.05■□□□□ 0.8
SCAF11-203ENST00000395453 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
SCAF11-203ENST00000395453 PXDNQ92626 1479 aa20.03■□□□□ 0.8
SCAF11-203ENST00000395453 MARF1Q9Y4F3 1742 aaKnown RBP20.03■□□□□ 0.8
SCAF11-203ENST00000395453 FOXO3O43524 673 aa20.02■□□□□ 0.8
SCAF11-203ENST00000395453 UNC5CLQ8IV45 518 aa20.02■□□□□ 0.8
SCAF11-203ENST00000395453 PIK3C2GO75747 1445 aa20.01■□□□□ 0.79
SCAF11-203ENST00000395453 HRCP23327 699 aa20.01■□□□□ 0.79
SCAF11-203ENST00000395453 XPCQ01831 940 aaPredicted RBP20.01■□□□□ 0.79
SCAF11-203ENST00000395453 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
SCAF11-203ENST00000395453 TECPR2O15040 1411 aa20■□□□□ 0.79
SCAF11-203ENST00000395453 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
SCAF11-203ENST00000395453 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.99■□□□□ 0.79
SCAF11-203ENST00000395453 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
SCAF11-203ENST00000395453 ABCC11Q96J66 1382 aa19.99■□□□□ 0.79
SCAF11-203ENST00000395453 DEFB132Q7Z7B7 95 aa19.98■□□□□ 0.79
SCAF11-203ENST00000395453 NRXN1Q9ULB1 1477 aa19.97■□□□□ 0.79
SCAF11-203ENST00000395453 SLIT2O94813 1529 aa19.97■□□□□ 0.79
SCAF11-203ENST00000395453 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
SCAF11-203ENST00000395453 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
SCAF11-203ENST00000395453 GLI3P10071 1580 aa19.97■□□□□ 0.79
SCAF11-203ENST00000395453 STK26Q9P289 416 aa19.96■□□□□ 0.79
SCAF11-203ENST00000395453 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
SCAF11-203ENST00000395453 SEPT12Q8IYM1 358 aa19.94■□□□□ 0.78
SCAF11-203ENST00000395453 SIRT1Q96EB6 747 aa19.94■□□□□ 0.78
SCAF11-203ENST00000395453 KNDC1Q76NI1 1749 aa19.94■□□□□ 0.78
SCAF11-203ENST00000395453 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
SCAF11-203ENST00000395453 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
SCAF11-203ENST00000395453 YTHDC2Q9H6S0 1430 aaKnown RBP19.92■□□□□ 0.78
SCAF11-203ENST00000395453 LRP5O75197 1615 aa19.92■□□□□ 0.78
SCAF11-203ENST00000395453 VPS72Q15906 364 aa19.91■□□□□ 0.78
SCAF11-203ENST00000395453 BRWD3Q6RI45 1802 aa19.91■□□□□ 0.78
SCAF11-203ENST00000395453 HAP1P54257 671 aaPredicted RBP19.9■□□□□ 0.78
SCAF11-203ENST00000395453 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
SCAF11-203ENST00000395453 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
SCAF11-203ENST00000395453 ONECUT3O60422 494 aaPredicted RBP19.89■□□□□ 0.77
SCAF11-203ENST00000395453 KRT28Q7Z3Y7 464 aa19.89■□□□□ 0.77
SCAF11-203ENST00000395453 KRT27Q7Z3Y8 459 aa19.89■□□□□ 0.77
SCAF11-203ENST00000395453 USP32Q8NFA0 1604 aa19.89■□□□□ 0.77
SCAF11-203ENST00000395453 CCDC9Q9Y3X0 531 aaKnown RBP19.88■□□□□ 0.77
SCAF11-203ENST00000395453 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
SCAF11-203ENST00000395453 BAG6P46379 1132 aa19.86■□□□□ 0.77
SCAF11-203ENST00000395453 KIF1AQ12756 1690 aa19.86■□□□□ 0.77
SCAF11-203ENST00000395453 PSME1Q06323 249 aa19.85■□□□□ 0.77
SCAF11-203ENST00000395453 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
SCAF11-203ENST00000395453 PSDA5PKW4 1024 aaPredicted RBP19.84■□□□□ 0.77
SCAF11-203ENST00000395453 TNS3Q68CZ2 1445 aa19.83■□□□□ 0.76
SCAF11-203ENST00000395453 CABLES1Q8TDN4 633 aa19.82■□□□□ 0.76
SCAF11-203ENST00000395453 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
SCAF11-203ENST00000395453 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
SCAF11-203ENST00000395453 A0A0G2JS52 829 aa19.81■□□□□ 0.76
SCAF11-203ENST00000395453 MYT1Q01538 1121 aa19.81■□□□□ 0.76
SCAF11-203ENST00000395453 DCAF11Q8TEB1 546 aa19.81■□□□□ 0.76
SCAF11-203ENST00000395453 ADGRB1O14514 1584 aa19.81■□□□□ 0.76
SCAF11-203ENST00000395453 PHF8Q9UPP1 1060 aa19.8■□□□□ 0.76
SCAF11-203ENST00000395453 DLC1Q96QB1 1528 aa19.8■□□□□ 0.76
SCAF11-203ENST00000395453 PRAM1Q96QH2 718 aa19.79■□□□□ 0.76
SCAF11-203ENST00000395453 KDM2AQ9Y2K7 1162 aa19.79■□□□□ 0.76
SCAF11-203ENST00000395453 PLCH1Q4KWH8 1693 aa19.79■□□□□ 0.76
SCAF11-203ENST00000395453 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
SCAF11-203ENST00000395453 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
SCAF11-203ENST00000395453 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
SCAF11-203ENST00000395453 ARHGEF10O15013 1369 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms