RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 LAMC1P11047 1609 aa33.79■■■■□ 3
PMS2P3-201ENST00000394921 CFAP70Q5T0N1 1121 aa33.79■■■■□ 3
PMS2P3-201ENST00000394921 PLEKHH1Q9ULM0 1364 aa33.78■■■■□ 3
PMS2P3-201ENST00000394921 ORAI2Q96SN7 254 aa33.77■■■■□ 3
PMS2P3-201ENST00000394921 POTEAQ6S8J7 498 aa33.75■■■□□ 2.99
PMS2P3-201ENST00000394921 SIRT1Q96EB6 747 aa33.72■■■□□ 2.99
PMS2P3-201ENST00000394921 LRRC59Q96AG4 307 aaKnown RBP33.71■■■□□ 2.99
PMS2P3-201ENST00000394921 DHX57Q6P158 1386 aaKnown RBP33.7■■■□□ 2.99
PMS2P3-201ENST00000394921 SOS2Q07890 1332 aaPredicted RBP33.67■■■□□ 2.98
PMS2P3-201ENST00000394921 ADGRB1O14514 1584 aa33.67■■■□□ 2.98
PMS2P3-201ENST00000394921 PNPLA6Q8IY17 1366 aa33.67■■■□□ 2.98
PMS2P3-201ENST00000394921 DCAF11Q8TEB1 546 aa33.66■■■□□ 2.98
PMS2P3-201ENST00000394921 FMN2Q9NZ56 1722 aa33.64■■■□□ 2.98
PMS2P3-201ENST00000394921 KDM2AQ9Y2K7 1162 aa33.64■■■□□ 2.98
PMS2P3-201ENST00000394921 NUTM2BA6NNL0 878 aaPredicted RBP33.63■■■□□ 2.97
PMS2P3-201ENST00000394921 NUTM2EB1AL46 878 aaPredicted RBP33.63■■■□□ 2.97
PMS2P3-201ENST00000394921 MEX3CQ5U5Q3 659 aaKnown RBP33.63■■■□□ 2.97
PMS2P3-201ENST00000394921 NUTM2AQ8IVF1 878 aaPredicted RBP33.63■■■□□ 2.97
PMS2P3-201ENST00000394921 DLC1Q96QB1 1528 aa33.62■■■□□ 2.97
PMS2P3-201ENST00000394921 ESCO1Q5FWF5 840 aa33.61■■■□□ 2.97
PMS2P3-201ENST00000394921 STAC3Q96MF2 364 aa33.6■■■□□ 2.97
PMS2P3-201ENST00000394921 NUTM2FA1L443 756 aa33.59■■■□□ 2.97
PMS2P3-201ENST00000394921 PRAM1Q96QH2 718 aa33.57■■■□□ 2.97
PMS2P3-201ENST00000394921 PXDNQ92626 1479 aa33.55■■■□□ 2.96
PMS2P3-201ENST00000394921 NPHP3Q7Z494 1330 aa33.55■■■□□ 2.96
PMS2P3-201ENST00000394921 SAFB2Q14151 953 aaKnown RBP eCLIP33.53■■■□□ 2.96
PMS2P3-201ENST00000394921 FOXO3O43524 673 aa33.52■■■□□ 2.96
PMS2P3-201ENST00000394921 ZNF772Q68DY9 489 aaPredicted RBP33.52■■■□□ 2.96
PMS2P3-201ENST00000394921 RGPD8O14715 1765 aaPredicted RBP33.51■■■□□ 2.95
PMS2P3-201ENST00000394921 TRAK1Q9UPV9 953 aa33.51■■■□□ 2.95
PMS2P3-201ENST00000394921 COL22A1Q8NFW1 1626 aaPredicted RBP33.49■■■□□ 2.95
PMS2P3-201ENST00000394921 KIF1AQ12756 1690 aa33.49■■■□□ 2.95
PMS2P3-201ENST00000394921 POGKQ9P215 609 aa33.49■■■□□ 2.95
PMS2P3-201ENST00000394921 ADGRB2O60241 1585 aa33.48■■■□□ 2.95
PMS2P3-201ENST00000394921 XPCQ01831 940 aaPredicted RBP33.48■■■□□ 2.95
PMS2P3-201ENST00000394921 AFF2P51816 1311 aa33.46■■■□□ 2.95
PMS2P3-201ENST00000394921 C8orf37Q96NL8 207 aa33.43■■■□□ 2.94
PMS2P3-201ENST00000394921 USP32Q8NFA0 1604 aa33.42■■■□□ 2.94
PMS2P3-201ENST00000394921 ADAMTS2O95450 1211 aa33.41■■■□□ 2.94
PMS2P3-201ENST00000394921 ARHGEF28Q8N1W1 1705 aaKnown RBP33.41■■■□□ 2.94
PMS2P3-201ENST00000394921 PHF8Q9UPP1 1060 aa33.4■■■□□ 2.94
PMS2P3-201ENST00000394921 KIAA1210Q9ULL0 1709 aa33.4■■■□□ 2.94
PMS2P3-201ENST00000394921 ANKARQ7Z5J8 1434 aa33.39■■■□□ 2.94
PMS2P3-201ENST00000394921 HIRIP3Q9BW71 556 aaPredicted RBP33.38■■■□□ 2.93
PMS2P3-201ENST00000394921 MINK1Q8N4C8 1332 aaPredicted RBP33.38■■■□□ 2.93
PMS2P3-201ENST00000394921 SPATA31A3Q5VYP0 1347 aa33.35■■■□□ 2.93
PMS2P3-201ENST00000394921 KRT28Q7Z3Y7 464 aa33.35■■■□□ 2.93
PMS2P3-201ENST00000394921 NGLY1Q96IV0 654 aa33.33■■■□□ 2.93
PMS2P3-201ENST00000394921 RXRBP28702 533 aa33.32■■■□□ 2.93
PMS2P3-201ENST00000394921 PRR36Q9H6K5 1346 aa33.32■■■□□ 2.92
PMS2P3-201ENST00000394921 TULP4Q9NRJ4 1543 aa33.31■■■□□ 2.92
PMS2P3-201ENST00000394921 WASLO00401 505 aaPredicted RBP33.3■■■□□ 2.92
PMS2P3-201ENST00000394921 NBPF1Q3BBV0 1214 aa33.29■■■□□ 2.92
PMS2P3-201ENST00000394921 MARF1Q9Y4F3 1742 aaKnown RBP33.29■■■□□ 2.92
PMS2P3-201ENST00000394921 SIN3AQ96ST3 1273 aa33.28■■■□□ 2.92
PMS2P3-201ENST00000394921 CDK12Q9NYV4 1490 aaPredicted RBP33.28■■■□□ 2.92
PMS2P3-201ENST00000394921 PMFBP1Q8TBY8 1022 aa33.28■■■□□ 2.92
PMS2P3-201ENST00000394921 QTRT2Q9H974 415 aaKnown RBP33.28■■■□□ 2.92
PMS2P3-201ENST00000394921 EIF3AQ14152 1382 aaKnown RBP33.27■■■□□ 2.92
PMS2P3-201ENST00000394921 TNS3Q68CZ2 1445 aa33.27■■■□□ 2.92
PMS2P3-201ENST00000394921 FNBP4Q8N3X1 1017 aaPredicted RBP33.27■■■□□ 2.92
PMS2P3-201ENST00000394921 L3MBTL2Q969R5 705 aa33.27■■■□□ 2.92
PMS2P3-201ENST00000394921 SBNO1A3KN83 1393 aa33.26■■■□□ 2.91
PMS2P3-201ENST00000394921 PSME1Q06323 249 aa33.25■■■□□ 2.91
PMS2P3-201ENST00000394921 USP21Q9UK80 565 aa33.23■■■□□ 2.91
PMS2P3-201ENST00000394921 RBM6P78332 1123 aaKnown RBP33.22■■■□□ 2.91
PMS2P3-201ENST00000394921 TRPM3Q9HCF6 1732 aaPredicted RBP33.21■■■□□ 2.91
PMS2P3-201ENST00000394921 ATP7BP35670 1465 aa33.19■■■□□ 2.9
PMS2P3-201ENST00000394921 RGS12O14924 1447 aa33.18■■■□□ 2.9
PMS2P3-201ENST00000394921 ATRNO75882 1429 aa33.17■■■□□ 2.9
PMS2P3-201ENST00000394921 BCL9LQ86UU0 1499 aa33.17■■■□□ 2.9
PMS2P3-201ENST00000394921 NEUROD1Q13562 356 aa33.17■■■□□ 2.9
PMS2P3-201ENST00000394921 TRPC5Q9UL62 973 aaPredicted RBP33.16■■■□□ 2.9
PMS2P3-201ENST00000394921 ITSN1Q15811 1721 aa33.15■■■□□ 2.9
PMS2P3-201ENST00000394921 ABCA3Q99758 1704 aa33.15■■■□□ 2.9
PMS2P3-201ENST00000394921 ARHGEF10O15013 1369 aa33.15■■■□□ 2.9
PMS2P3-201ENST00000394921 CABLES1Q8TDN4 633 aa33.14■■■□□ 2.9
PMS2P3-201ENST00000394921 NUDT16Q96DE0 195 aaKnown RBP33.14■■■□□ 2.9
PMS2P3-201ENST00000394921 CDK19Q9BWU1 502 aa33.14■■■□□ 2.9
PMS2P3-201ENST00000394921 ALS2Q96Q42 1657 aa33.13■■■□□ 2.89
PMS2P3-201ENST00000394921 TRPM1Q7Z4N2 1603 aa33.12■■■□□ 2.89
PMS2P3-201ENST00000394921 GPRASP1Q5JY77 1395 aa33.12■■■□□ 2.89
PMS2P3-201ENST00000394921 LMOD2Q6P5Q4 547 aa33.11■■■□□ 2.89
PMS2P3-201ENST00000394921 SLIT2O94813 1529 aa33.11■■■□□ 2.89
PMS2P3-201ENST00000394921 TOPAZ1Q8N9V7 1692 aa33.1■■■□□ 2.89
PMS2P3-201ENST00000394921 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.09■■■□□ 2.89
PMS2P3-201ENST00000394921 NGDNQ8NEJ9 315 aaKnown RBP33.09■■■□□ 2.89
PMS2P3-201ENST00000394921 CENPJQ9HC77 1338 aaPredicted RBP33.08■■■□□ 2.89
PMS2P3-201ENST00000394921 PLEKHG5O94827 1062 aa33.07■■■□□ 2.88
PMS2P3-201ENST00000394921 UPF1Q92900 1129 aaKnown RBP eCLIP33.07■■■□□ 2.88
PMS2P3-201ENST00000394921 TRIM26Q12899 539 aaPredicted RBP33.06■■■□□ 2.88
PMS2P3-201ENST00000394921 QRICH2Q9H0J4 1663 aa33.05■■■□□ 2.88
PMS2P3-201ENST00000394921 HAP1P54257 671 aaPredicted RBP33.04■■■□□ 2.88
PMS2P3-201ENST00000394921 UNC5CLQ8IV45 518 aa33.02■■■□□ 2.88
PMS2P3-201ENST00000394921 CCDC61Q9Y6R9 512 aa33.02■■■□□ 2.88
PMS2P3-201ENST00000394921 POLR3AO14802 1390 aaPredicted RBP33.01■■■□□ 2.88
PMS2P3-201ENST00000394921 PLCH1Q4KWH8 1693 aa33.01■■■□□ 2.87
PMS2P3-201ENST00000394921 CRYBG1Q9Y4K1 1723 aa33■■■□□ 2.87
PMS2P3-201ENST00000394921 PLEKHG3A1L390 1219 aa33■■■□□ 2.87
PMS2P3-201ENST00000394921 GJD4Q96KN9 370 aaPredicted RBP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms