RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 GGT6Q6P531 493 aa20.36■□□□□ 0.85
PTBP1-204ENST00000394601 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
PTBP1-204ENST00000394601 POLR3AO14802 1390 aaPredicted RBP20.36■□□□□ 0.85
PTBP1-204ENST00000394601 RAPGEF3O95398 923 aa20.36■□□□□ 0.85
PTBP1-204ENST00000394601 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
PTBP1-204ENST00000394601 KDM2BQ8NHM5 1336 aa20.35■□□□□ 0.85
PTBP1-204ENST00000394601 GOLGA2Q08379 1002 aa20.34■□□□□ 0.85
PTBP1-204ENST00000394601 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
PTBP1-204ENST00000394601 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
PTBP1-204ENST00000394601 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
PTBP1-204ENST00000394601 TMEM132EQ6IEE7 984 aa20.33■□□□□ 0.84
PTBP1-204ENST00000394601 TRAK1Q9UPV9 953 aa20.33■□□□□ 0.84
PTBP1-204ENST00000394601 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
PTBP1-204ENST00000394601 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
PTBP1-204ENST00000394601 YEATS2Q9ULM3 1422 aa20.3■□□□□ 0.84
PTBP1-204ENST00000394601 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
PTBP1-204ENST00000394601 APAF1O14727 1248 aa20.3■□□□□ 0.84
PTBP1-204ENST00000394601 SLC12A5Q9H2X9 1139 aa20.3■□□□□ 0.84
PTBP1-204ENST00000394601 PREX1Q8TCU6 1659 aa20.3■□□□□ 0.84
PTBP1-204ENST00000394601 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
PTBP1-204ENST00000394601 ZFYVE9O95405 1425 aa20.29■□□□□ 0.84
PTBP1-204ENST00000394601 BACH2Q9BYV9 841 aa20.28■□□□□ 0.84
PTBP1-204ENST00000394601 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
PTBP1-204ENST00000394601 MS4A1P11836 297 aa20.28■□□□□ 0.84
PTBP1-204ENST00000394601 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
PTBP1-204ENST00000394601 PDE4AP27815 886 aa20.27■□□□□ 0.84
PTBP1-204ENST00000394601 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
PTBP1-204ENST00000394601 GSE1Q14687 1217 aa20.25■□□□□ 0.83
PTBP1-204ENST00000394601 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
PTBP1-204ENST00000394601 IDI1Q13907 227 aa20.24■□□□□ 0.83
PTBP1-204ENST00000394601 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
PTBP1-204ENST00000394601 PTPRMP28827 1452 aa20.22■□□□□ 0.83
PTBP1-204ENST00000394601 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
PTBP1-204ENST00000394601 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
PTBP1-204ENST00000394601 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.83
PTBP1-204ENST00000394601 E9PSI1 815 aa20.2■□□□□ 0.82
PTBP1-204ENST00000394601 BCAR3O75815 825 aa20.2■□□□□ 0.82
PTBP1-204ENST00000394601 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
PTBP1-204ENST00000394601 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-204ENST00000394601 ADGRB2O60241 1585 aa20.19■□□□□ 0.82
PTBP1-204ENST00000394601 VGFO15240 615 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-204ENST00000394601 NFKBIBQ15653 356 aa20.19■□□□□ 0.82
PTBP1-204ENST00000394601 PKNOX2Q96KN3 472 aa20.19■□□□□ 0.82
PTBP1-204ENST00000394601 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
PTBP1-204ENST00000394601 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
PTBP1-204ENST00000394601 MORC1Q86VD1 984 aa20.17■□□□□ 0.82
PTBP1-204ENST00000394601 ANKRD26Q9UPS8 1709 aa20.17■□□□□ 0.82
PTBP1-204ENST00000394601 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
PTBP1-204ENST00000394601 CENPQQ7L2Z9 268 aaPredicted RBP20.15■□□□□ 0.82
PTBP1-204ENST00000394601 COL3A1P02461 1466 aaPredicted RBP20.15■□□□□ 0.82
PTBP1-204ENST00000394601 SLC52A1Q9NWF4 448 aa20.15■□□□□ 0.82
PTBP1-204ENST00000394601 EVC2Q86UK5 1308 aa20.14■□□□□ 0.82
PTBP1-204ENST00000394601 SETD1AO15047 1707 aaKnown RBP20.14■□□□□ 0.81
PTBP1-204ENST00000394601 NSD2O96028 1365 aa20.14■□□□□ 0.81
PTBP1-204ENST00000394601 CGNL1Q0VF96 1302 aa20.14■□□□□ 0.81
PTBP1-204ENST00000394601 MTHFSP49914 203 aa20.14■□□□□ 0.81
PTBP1-204ENST00000394601 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
PTBP1-204ENST00000394601 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
PTBP1-204ENST00000394601 DIP2BQ9P265 1576 aa20.13■□□□□ 0.81
PTBP1-204ENST00000394601 REREQ9P2R6 1566 aa20.13■□□□□ 0.81
PTBP1-204ENST00000394601 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
PTBP1-204ENST00000394601 CABP2Q9NPB3 220 aa20.13■□□□□ 0.81
PTBP1-204ENST00000394601 RUNDC1Q96C34 613 aa20.12■□□□□ 0.81
PTBP1-204ENST00000394601 ALKQ9UM73 1620 aa20.12■□□□□ 0.81
PTBP1-204ENST00000394601 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
PTBP1-204ENST00000394601 TCP11L2Q8N4U5 519 aa20.1■□□□□ 0.81
PTBP1-204ENST00000394601 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
PTBP1-204ENST00000394601 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
PTBP1-204ENST00000394601 YTHDC2Q9H6S0 1430 aaKnown RBP20.09■□□□□ 0.81
PTBP1-204ENST00000394601 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
PTBP1-204ENST00000394601 RGS3P49796 1198 aa20.09■□□□□ 0.81
PTBP1-204ENST00000394601 ARHGEF40Q8TER5 1519 aa20.08■□□□□ 0.81
PTBP1-204ENST00000394601 C8orf34Q49A92 452 aa20.08■□□□□ 0.81
PTBP1-204ENST00000394601 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
PTBP1-204ENST00000394601 MED14O60244 1454 aa20.08■□□□□ 0.81
PTBP1-204ENST00000394601 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.8
PTBP1-204ENST00000394601 FBXO31Q5XUX0 539 aaPredicted RBP20.08■□□□□ 0.8
PTBP1-204ENST00000394601 RRP7AQ9Y3A4 280 aaKnown RBP20.07■□□□□ 0.8
PTBP1-204ENST00000394601 NAP1L5Q96NT1 182 aaPredicted RBP20.07■□□□□ 0.8
PTBP1-204ENST00000394601 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
PTBP1-204ENST00000394601 AGLP35573 1532 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 PDE3AQ14432 1141 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 IGHDP01880 384 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 RIMBP3CA6NJZ7 1639 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 RIMBP3BA6NNM3 1639 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 RIMBP3Q9UFD9 1639 aa20.06■□□□□ 0.8
PTBP1-204ENST00000394601 WDR63Q8IWG1 891 aa20.05■□□□□ 0.8
PTBP1-204ENST00000394601 RARSP54136 660 aaKnown RBP20.05■□□□□ 0.8
PTBP1-204ENST00000394601 PLEKHF1Q96S99 279 aa20.05■□□□□ 0.8
PTBP1-204ENST00000394601 SPATA31D1Q6ZQQ2 1576 aa20.04■□□□□ 0.8
PTBP1-204ENST00000394601 KIF20BQ96Q89 1820 aa20.04■□□□□ 0.8
PTBP1-204ENST00000394601 SAFB2Q14151 953 aaKnown RBP eCLIP20.04■□□□□ 0.8
PTBP1-204ENST00000394601 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
PTBP1-204ENST00000394601 TSPOAP1O95153 1857 aa20.02■□□□□ 0.8
PTBP1-204ENST00000394601 STK26Q9P289 416 aa20.02■□□□□ 0.8
PTBP1-204ENST00000394601 A2ML1A8K2U0 1454 aa20.01■□□□□ 0.79
PTBP1-204ENST00000394601 FYB1O15117 783 aa20.01■□□□□ 0.79
PTBP1-204ENST00000394601 PANK1Q8TE04 598 aa20.01■□□□□ 0.79
PTBP1-204ENST00000394601 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms