RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
NUP58-204ENST00000394327 ZMYM4Q5VZL5 1548 aa9.49□□□□□ -0.89
NUP58-204ENST00000394327 FOSBP53539 338 aa9.48□□□□□ -0.89
NUP58-204ENST00000394327 FAM50AQ14320 339 aaKnown RBP9.48□□□□□ -0.89
NUP58-204ENST00000394327 MBD5Q9P267 1494 aa9.48□□□□□ -0.89
NUP58-204ENST00000394327 INO80Q9ULG1 1556 aaPredicted RBP9.48□□□□□ -0.89
NUP58-204ENST00000394327 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
NUP58-204ENST00000394327 ARHGEF12Q9NZN5 1544 aa9.48□□□□□ -0.89
NUP58-204ENST00000394327 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
NUP58-204ENST00000394327 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
NUP58-204ENST00000394327 FRMPD1Q5SYB0 1578 aa9.47□□□□□ -0.89
NUP58-204ENST00000394327 ZNF644Q9H582 1327 aaPredicted RBP9.47□□□□□ -0.89
NUP58-204ENST00000394327 DAPK1P53355 1430 aa9.47□□□□□ -0.89
NUP58-204ENST00000394327 KIDINS220Q9ULH0 1771 aa9.47□□□□□ -0.89
NUP58-204ENST00000394327 PLXNC1O60486 1568 aa9.47□□□□□ -0.89
NUP58-204ENST00000394327 GCC2Q8IWJ2 1684 aa9.46□□□□□ -0.9
NUP58-204ENST00000394327 PHF14O94880 888 aa9.46□□□□□ -0.9
NUP58-204ENST00000394327 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
NUP58-204ENST00000394327 ATP7AQ04656 1500 aa9.46□□□□□ -0.9
NUP58-204ENST00000394327 ZFYVE16Q7Z3T8 1539 aa9.46□□□□□ -0.9
NUP58-204ENST00000394327 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
NUP58-204ENST00000394327 GPR37O15354 613 aa9.45□□□□□ -0.9
NUP58-204ENST00000394327 ABCC5O15440 1437 aa9.45□□□□□ -0.9
NUP58-204ENST00000394327 TRAPPC8Q9Y2L5 1435 aa9.45□□□□□ -0.9
NUP58-204ENST00000394327 MAGI2Q86UL8 1455 aa9.44□□□□□ -0.9
NUP58-204ENST00000394327 MLH3Q9UHC1 1453 aa9.44□□□□□ -0.9
NUP58-204ENST00000394327 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.9
NUP58-204ENST00000394327 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
NUP58-204ENST00000394327 RTEL1-TNFRSF6BF6WH68 1400 aa9.44□□□□□ -0.9
NUP58-204ENST00000394327 C9orf84Q5VXU9 1444 aa9.44□□□□□ -0.9
NUP58-204ENST00000394327 ADGRL2O95490 1459 aa9.44□□□□□ -0.9
NUP58-204ENST00000394327 TSPY4P0CV99 314 aa9.43□□□□□ -0.9
NUP58-204ENST00000394327 TSPY10P0CW01 314 aa9.43□□□□□ -0.9
NUP58-204ENST00000394327 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
NUP58-204ENST00000394327 ADAM33Q9BZ11 813 aa9.43□□□□□ -0.9
NUP58-204ENST00000394327 CDHR5Q9HBB8 845 aa9.43□□□□□ -0.9
NUP58-204ENST00000394327 ARHGEF40Q8TER5 1519 aa9.43□□□□□ -0.9
NUP58-204ENST00000394327 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
NUP58-204ENST00000394327 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
NUP58-204ENST00000394327 ABCA6Q8N139 1617 aa9.42□□□□□ -0.9
NUP58-204ENST00000394327 SPAG9O60271 1321 aaKnown RBP9.42□□□□□ -0.9
NUP58-204ENST00000394327 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
NUP58-204ENST00000394327 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
NUP58-204ENST00000394327 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
NUP58-204ENST00000394327 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
NUP58-204ENST00000394327 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
NUP58-204ENST00000394327 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
NUP58-204ENST00000394327 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
NUP58-204ENST00000394327 ANKRD30AQ9BXX3 1397 aa9.41□□□□□ -0.9
NUP58-204ENST00000394327 EIF2AK4Q9P2K8 1649 aaKnown RBP9.41□□□□□ -0.9
NUP58-204ENST00000394327 BCORL1Q5H9F3 1711 aa9.4□□□□□ -0.9
NUP58-204ENST00000394327 AFAP1Q8N556 730 aa9.4□□□□□ -0.9
NUP58-204ENST00000394327 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
NUP58-204ENST00000394327 DUOX2Q9NRD8 1548 aa9.4□□□□□ -0.91
NUP58-204ENST00000394327 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 ITGAEP38570 1179 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 EPAS1Q99814 870 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 PTPRKQ15262 1439 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 NCOA1Q15788 1441 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
NUP58-204ENST00000394327 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
NUP58-204ENST00000394327 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
NUP58-204ENST00000394327 VARS2Q5ST30 1063 aaKnown RBP9.38□□□□□ -0.91
NUP58-204ENST00000394327 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
NUP58-204ENST00000394327 KIF15Q9NS87 1388 aa9.38□□□□□ -0.91
NUP58-204ENST00000394327 EMP3P54852 163 aa9.37□□□□□ -0.91
NUP58-204ENST00000394327 ERBINQ96RT1 1412 aa9.37□□□□□ -0.91
NUP58-204ENST00000394327 COL9A1P20849 921 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 FECHP22830 423 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 C6orf132Q5T0Z8 1188 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 NAIPQ13075 1403 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 ATP10AO60312 1499 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 A2MP01023 1474 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 DEPDC5O75140 1603 aa9.36□□□□□ -0.91
NUP58-204ENST00000394327 RNF17Q9BXT8 1623 aaKnown RBP9.36□□□□□ -0.91
NUP58-204ENST00000394327 YEATS2Q9ULM3 1422 aa9.35□□□□□ -0.91
NUP58-204ENST00000394327 ERBB3P21860 1342 aa9.35□□□□□ -0.91
NUP58-204ENST00000394327 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
NUP58-204ENST00000394327 MAP3K7O43318 606 aa9.35□□□□□ -0.91
NUP58-204ENST00000394327 GPIHBP1Q8IV16 184 aa9.35□□□□□ -0.91
NUP58-204ENST00000394327 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
NUP58-204ENST00000394327 UNC13BO14795 1591 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 AGLP35573 1532 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 ANKRD50Q9ULJ7 1429 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 NUTM2FA1L443 756 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 ZMYND10O75800 440 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 PTGDRQ13258 359 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
NUP58-204ENST00000394327 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
NUP58-204ENST00000394327 SETD5Q9C0A6 1442 aa9.33□□□□□ -0.92
NUP58-204ENST00000394327 DHX29Q7Z478 1369 aaKnown RBP9.33□□□□□ -0.92
NUP58-204ENST00000394327 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
NUP58-204ENST00000394327 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
NUP58-204ENST00000394327 SIGLEC1Q9BZZ2 1709 aa9.32□□□□□ -0.92
NUP58-204ENST00000394327 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms