RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 TET3O43151 1660 aa8.19□□□□□ -1.1
CASC3-202ENST00000394114 PRDM15P57071 1507 aaPredicted RBP8.19□□□□□ -1.1
CASC3-202ENST00000394114 ATP10AO60312 1499 aa8.19□□□□□ -1.1
CASC3-202ENST00000394114 YTHDC1Q96MU7 727 aaKnown RBP8.18□□□□□ -1.1
CASC3-202ENST00000394114 SPHKAPQ2M3C7 1700 aa8.18□□□□□ -1.1
CASC3-202ENST00000394114 PPP1R37O75864 691 aa8.18□□□□□ -1.1
CASC3-202ENST00000394114 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
CASC3-202ENST00000394114 VWDEQ8N2E2 1590 aa8.18□□□□□ -1.1
CASC3-202ENST00000394114 UGGT1Q9NYU2 1555 aa8.18□□□□□ -1.1
CASC3-202ENST00000394114 WASHC2CQ9Y4E1 1318 aa8.17□□□□□ -1.1
CASC3-202ENST00000394114 TMCO4Q5TGY1 634 aa8.16□□□□□ -1.1
CASC3-202ENST00000394114 RNF17Q9BXT8 1623 aaKnown RBP8.16□□□□□ -1.1
CASC3-202ENST00000394114 COL17A1Q9UMD9 1497 aaPredicted RBP8.16□□□□□ -1.1
CASC3-202ENST00000394114 NCKAP5LQ9HCH0 1330 aa8.16□□□□□ -1.1
CASC3-202ENST00000394114 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
CASC3-202ENST00000394114 EFCAB6Q5THR3 1501 aa8.16□□□□□ -1.1
CASC3-202ENST00000394114 CLTCL1P53675 1640 aa8.16□□□□□ -1.1
CASC3-202ENST00000394114 C11orf95C9JLR9 678 aaPredicted RBP8.16□□□□□ -1.1
CASC3-202ENST00000394114 TRPM2O94759 1503 aa8.15□□□□□ -1.1
CASC3-202ENST00000394114 MLECQ14165 292 aa8.15□□□□□ -1.1
CASC3-202ENST00000394114 POLR3GLQ9BT43 218 aa8.15□□□□□ -1.1
CASC3-202ENST00000394114 CARD11Q9BXL7 1154 aa8.15□□□□□ -1.1
CASC3-202ENST00000394114 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.11
CASC3-202ENST00000394114 USP47Q96K76 1375 aa8.15□□□□□ -1.11
CASC3-202ENST00000394114 MLLT3P42568 568 aaPredicted RBP8.14□□□□□ -1.11
CASC3-202ENST00000394114 MFSD10Q14728 455 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 NBPF1Q3BBV0 1214 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
CASC3-202ENST00000394114 ZMYM4Q5VZL5 1548 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 PTPRTO14522 1441 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 NPATQ14207 1427 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 UHRF1BP1Q6BDS2 1440 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 SPATA31E1Q6ZUB1 1445 aa8.14□□□□□ -1.11
CASC3-202ENST00000394114 RALGAPBQ86X10 1494 aa8.13□□□□□ -1.11
CASC3-202ENST00000394114 ROCK2O75116 1388 aaKnown RBP8.13□□□□□ -1.11
CASC3-202ENST00000394114 ABCC3O15438 1527 aa8.13□□□□□ -1.11
CASC3-202ENST00000394114 PRAG1Q86YV5 1406 aa8.13□□□□□ -1.11
CASC3-202ENST00000394114 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
CASC3-202ENST00000394114 CAMSAP1Q5T5Y3 1602 aa8.12□□□□□ -1.11
CASC3-202ENST00000394114 BCORL1Q5H9F3 1711 aa8.12□□□□□ -1.11
CASC3-202ENST00000394114 PDAP1Q13442 181 aaKnown RBP8.12□□□□□ -1.11
CASC3-202ENST00000394114 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
CASC3-202ENST00000394114 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
CASC3-202ENST00000394114 LMTK2Q8IWU2 1503 aa8.12□□□□□ -1.11
CASC3-202ENST00000394114 SIGLEC1Q9BZZ2 1709 aa8.12□□□□□ -1.11
CASC3-202ENST00000394114 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
CASC3-202ENST00000394114 CAMK2BQ13554 666 aa8.11□□□□□ -1.11
CASC3-202ENST00000394114 KIF1BO60333 1816 aa8.11□□□□□ -1.11
CASC3-202ENST00000394114 ST20-MTHFSA0A0A6YYL1 179 aa8.11□□□□□ -1.11
CASC3-202ENST00000394114 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
CASC3-202ENST00000394114 FOXD4L5Q5VV16 416 aaPredicted RBP8.1□□□□□ -1.11
CASC3-202ENST00000394114 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
CASC3-202ENST00000394114 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
CASC3-202ENST00000394114 KIF7Q2M1P5 1343 aa8.1□□□□□ -1.11
CASC3-202ENST00000394114 MROH2AA6NES4 1674 aa8.1□□□□□ -1.11
CASC3-202ENST00000394114 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
CASC3-202ENST00000394114 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
CASC3-202ENST00000394114 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
CASC3-202ENST00000394114 MCM6Q14566 821 aa8.1□□□□□ -1.11
CASC3-202ENST00000394114 FBXO22Q8NEZ5 403 aa8.1□□□□□ -1.11
CASC3-202ENST00000394114 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
CASC3-202ENST00000394114 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
CASC3-202ENST00000394114 FBXO31Q5XUX0 539 aaPredicted RBP8.09□□□□□ -1.11
CASC3-202ENST00000394114 ARID4BQ4LE39 1312 aaPredicted RBP8.09□□□□□ -1.11
CASC3-202ENST00000394114 PDE4AP27815 886 aa8.09□□□□□ -1.11
CASC3-202ENST00000394114 PROSER2Q86WR7 435 aaPredicted RBP8.09□□□□□ -1.11
CASC3-202ENST00000394114 FNBP4Q8N3X1 1017 aaPredicted RBP8.09□□□□□ -1.11
CASC3-202ENST00000394114 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
CASC3-202ENST00000394114 MADDQ8WXG6 1647 aa8.08□□□□□ -1.12
CASC3-202ENST00000394114 GPR37O15354 613 aa8.08□□□□□ -1.12
CASC3-202ENST00000394114 AMHR2Q16671 573 aa8.08□□□□□ -1.12
CASC3-202ENST00000394114 CCDC97Q96F63 343 aaPredicted RBP8.08□□□□□ -1.12
CASC3-202ENST00000394114 ARHGEF40Q8TER5 1519 aa8.08□□□□□ -1.12
CASC3-202ENST00000394114 ANP32CO43423 234 aa8.08□□□□□ -1.12
CASC3-202ENST00000394114 DSG3P32926 999 aa8.08□□□□□ -1.12
CASC3-202ENST00000394114 ADGRF5Q8IZF2 1346 aa8.07□□□□□ -1.12
CASC3-202ENST00000394114 PARP9Q8IXQ6 854 aa8.07□□□□□ -1.12
CASC3-202ENST00000394114 POLR1AO95602 1720 aaPredicted RBP8.07□□□□□ -1.12
CASC3-202ENST00000394114 CLTCQ00610 1675 aaKnown RBP8.07□□□□□ -1.12
CASC3-202ENST00000394114 SYNMO15061 1565 aa8.07□□□□□ -1.12
CASC3-202ENST00000394114 CNTLNQ9NXG0 1405 aa8.07□□□□□ -1.12
CASC3-202ENST00000394114 ZC3H13Q5T200 1668 aaKnown RBP8.07□□□□□ -1.12
CASC3-202ENST00000394114 HMGB1P09429 215 aaKnown RBP8.06□□□□□ -1.12
CASC3-202ENST00000394114 IRF5Q13568 498 aa8.06□□□□□ -1.12
CASC3-202ENST00000394114 IDI1Q13907 227 aa8.06□□□□□ -1.12
CASC3-202ENST00000394114 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
CASC3-202ENST00000394114 DDX27Q96GQ7 796 aaKnown RBP8.06□□□□□ -1.12
CASC3-202ENST00000394114 CRISPLD2Q9H0B8 497 aa8.06□□□□□ -1.12
CASC3-202ENST00000394114 NOS1P29475 1434 aa8.06□□□□□ -1.12
CASC3-202ENST00000394114 MINK1Q8N4C8 1332 aaPredicted RBP8.06□□□□□ -1.12
CASC3-202ENST00000394114 ADGRB3O60242 1522 aa8.06□□□□□ -1.12
CASC3-202ENST00000394114 MYO5BQ9ULV0 1848 aa8.05□□□□□ -1.12
CASC3-202ENST00000394114 PREX1Q8TCU6 1659 aa8.05□□□□□ -1.12
CASC3-202ENST00000394114 ESF1Q9H501 851 aaKnown RBP8.05□□□□□ -1.12
CASC3-202ENST00000394114 GPRASP1Q5JY77 1395 aa8.05□□□□□ -1.12
CASC3-202ENST00000394114 NLRP6P59044 892 aa8.05□□□□□ -1.12
CASC3-202ENST00000394114 REREQ9P2R6 1566 aa8.05□□□□□ -1.12
CASC3-202ENST00000394114 IFT172Q9UG01 1749 aa8.05□□□□□ -1.12
CASC3-202ENST00000394114 AGLP35573 1532 aa8.04□□□□□ -1.12
CASC3-202ENST00000394114 ARHGAP31Q2M1Z3 1444 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms