RNA–Protein interactions for RNA: ENST00000393966.1

PLEKHG4-203, Transcript of pleckstrin homology and RhoGEF domain containing G4, humanhuman

TSL 1 (best)

Gene PLEKHG4, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG4-203ENST00000393966 BCANQ96GW7 911 aa18.46■□□□□ 0.55
PLEKHG4-203ENST00000393966 POGKQ9P215 609 aa18.45■□□□□ 0.54
PLEKHG4-203ENST00000393966 NLRP1Q9C000 1473 aa18.44■□□□□ 0.54
PLEKHG4-203ENST00000393966 DLC1Q96QB1 1528 aa18.44■□□□□ 0.54
PLEKHG4-203ENST00000393966 METP08581 1390 aa18.44■□□□□ 0.54
PLEKHG4-203ENST00000393966 DNAJC5Q9H3Z4 198 aa18.42■□□□□ 0.54
PLEKHG4-203ENST00000393966 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
PLEKHG4-203ENST00000393966 ABCC11Q96J66 1382 aa18.42■□□□□ 0.54
PLEKHG4-203ENST00000393966 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
PLEKHG4-203ENST00000393966 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
PLEKHG4-203ENST00000393966 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
PLEKHG4-203ENST00000393966 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
PLEKHG4-203ENST00000393966 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
PLEKHG4-203ENST00000393966 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
PLEKHG4-203ENST00000393966 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
PLEKHG4-203ENST00000393966 LTKP29376 864 aa18.4■□□□□ 0.54
PLEKHG4-203ENST00000393966 INSRP06213 1382 aa18.39■□□□□ 0.54
PLEKHG4-203ENST00000393966 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.54
PLEKHG4-203ENST00000393966 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
PLEKHG4-203ENST00000393966 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
PLEKHG4-203ENST00000393966 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
PLEKHG4-203ENST00000393966 CDK19Q9BWU1 502 aa18.37■□□□□ 0.53
PLEKHG4-203ENST00000393966 ADAMTS8Q9UP79 889 aa18.37■□□□□ 0.53
PLEKHG4-203ENST00000393966 A0A1W2PP64 1363 aa18.37■□□□□ 0.53
PLEKHG4-203ENST00000393966 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
PLEKHG4-203ENST00000393966 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 TECPR2O15040 1411 aa18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 KNDC1Q76NI1 1749 aa18.35■□□□□ 0.53
PLEKHG4-203ENST00000393966 ARHGAP23Q9P227 1491 aa18.34■□□□□ 0.53
PLEKHG4-203ENST00000393966 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
PLEKHG4-203ENST00000393966 SLIT1O75093 1534 aa18.33■□□□□ 0.53
PLEKHG4-203ENST00000393966 CPS1P31327 1500 aa18.33■□□□□ 0.52
PLEKHG4-203ENST00000393966 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
PLEKHG4-203ENST00000393966 FAM135BQ49AJ0 1406 aa18.32■□□□□ 0.52
PLEKHG4-203ENST00000393966 TNNT2P45379 298 aaPredicted RBP18.32■□□□□ 0.52
PLEKHG4-203ENST00000393966 IRX6P78412 446 aaPredicted RBP18.32■□□□□ 0.52
PLEKHG4-203ENST00000393966 MED14O60244 1454 aa18.31■□□□□ 0.52
PLEKHG4-203ENST00000393966 NSD2O96028 1365 aa18.3■□□□□ 0.52
PLEKHG4-203ENST00000393966 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
PLEKHG4-203ENST00000393966 RIMS1Q86UR5 1692 aaKnown RBP18.3■□□□□ 0.52
PLEKHG4-203ENST00000393966 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
PLEKHG4-203ENST00000393966 SIRT1Q96EB6 747 aa18.3■□□□□ 0.52
PLEKHG4-203ENST00000393966 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
PLEKHG4-203ENST00000393966 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
PLEKHG4-203ENST00000393966 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
PLEKHG4-203ENST00000393966 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
PLEKHG4-203ENST00000393966 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
PLEKHG4-203ENST00000393966 PTPRUQ92729 1446 aa18.27■□□□□ 0.52
PLEKHG4-203ENST00000393966 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.51
PLEKHG4-203ENST00000393966 CDCA7LQ96GN5 454 aa18.25■□□□□ 0.51
PLEKHG4-203ENST00000393966 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
PLEKHG4-203ENST00000393966 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
PLEKHG4-203ENST00000393966 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
PLEKHG4-203ENST00000393966 FYB1O15117 783 aa18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 ATP7BP35670 1465 aa18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 MTHFSP49914 203 aa18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 CCDC146Q8IYE0 955 aa18.24■□□□□ 0.51
PLEKHG4-203ENST00000393966 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
PLEKHG4-203ENST00000393966 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
PLEKHG4-203ENST00000393966 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
PLEKHG4-203ENST00000393966 PPIP5K1Q6PFW1 1433 aa18.22■□□□□ 0.51
PLEKHG4-203ENST00000393966 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
PLEKHG4-203ENST00000393966 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
PLEKHG4-203ENST00000393966 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
PLEKHG4-203ENST00000393966 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.51
PLEKHG4-203ENST00000393966 CPSF1Q10570 1443 aaKnown RBP18.2■□□□□ 0.5
PLEKHG4-203ENST00000393966 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
PLEKHG4-203ENST00000393966 ADGRB2O60241 1585 aa18.19■□□□□ 0.5
PLEKHG4-203ENST00000393966 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
PLEKHG4-203ENST00000393966 AMOTL2Q9Y2J4 779 aa18.19■□□□□ 0.5
PLEKHG4-203ENST00000393966 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
PLEKHG4-203ENST00000393966 DIP2AQ14689 1571 aa18.18■□□□□ 0.5
PLEKHG4-203ENST00000393966 APAF1O14727 1248 aa18.18■□□□□ 0.5
PLEKHG4-203ENST00000393966 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
PLEKHG4-203ENST00000393966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
PLEKHG4-203ENST00000393966 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
PLEKHG4-203ENST00000393966 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
PLEKHG4-203ENST00000393966 PTCH1Q13635 1447 aa18.16■□□□□ 0.5
PLEKHG4-203ENST00000393966 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
PLEKHG4-203ENST00000393966 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
PLEKHG4-203ENST00000393966 XRN1Q8IZH2 1706 aaKnown RBP18.14■□□□□ 0.49
PLEKHG4-203ENST00000393966 RCAN3Q9UKA8 241 aa18.14■□□□□ 0.49
PLEKHG4-203ENST00000393966 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
PLEKHG4-203ENST00000393966 MON2Q7Z3U7 1717 aa18.13■□□□□ 0.49
PLEKHG4-203ENST00000393966 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
PLEKHG4-203ENST00000393966 SETD1BQ9UPS6 1966 aaKnown RBP18.12■□□□□ 0.49
PLEKHG4-203ENST00000393966 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
PLEKHG4-203ENST00000393966 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
PLEKHG4-203ENST00000393966 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
PLEKHG4-203ENST00000393966 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
PLEKHG4-203ENST00000393966 GOLGA2Q08379 1002 aa18.11■□□□□ 0.49
PLEKHG4-203ENST00000393966 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
PLEKHG4-203ENST00000393966 NME9Q86XW9 330 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms