RNA–Protein interactions for RNA: ENST00000393829.6

ATP6V0A1-203, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V0A1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-203ENST00000393829 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
ATP6V0A1-203ENST00000393829 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
ATP6V0A1-203ENST00000393829 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
ATP6V0A1-203ENST00000393829 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
ATP6V0A1-203ENST00000393829 IQSEC2Q5JU85 1478 aa18.75■□□□□ 0.59
ATP6V0A1-203ENST00000393829 TRAK1Q9UPV9 953 aa18.75■□□□□ 0.59
ATP6V0A1-203ENST00000393829 KIDINS220Q9ULH0 1771 aa18.75■□□□□ 0.59
ATP6V0A1-203ENST00000393829 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
ATP6V0A1-203ENST00000393829 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
ATP6V0A1-203ENST00000393829 SEC24BO95487 1268 aa18.74■□□□□ 0.59
ATP6V0A1-203ENST00000393829 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
ATP6V0A1-203ENST00000393829 RARSP54136 660 aaKnown RBP18.74■□□□□ 0.59
ATP6V0A1-203ENST00000393829 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
ATP6V0A1-203ENST00000393829 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
ATP6V0A1-203ENST00000393829 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
ATP6V0A1-203ENST00000393829 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
ATP6V0A1-203ENST00000393829 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
ATP6V0A1-203ENST00000393829 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
ATP6V0A1-203ENST00000393829 PPLO60437 1756 aa18.72■□□□□ 0.59
ATP6V0A1-203ENST00000393829 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
ATP6V0A1-203ENST00000393829 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
ATP6V0A1-203ENST00000393829 RLBP1P12271 317 aa18.71■□□□□ 0.59
ATP6V0A1-203ENST00000393829 ADGRB1O14514 1584 aa18.71■□□□□ 0.59
ATP6V0A1-203ENST00000393829 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
ATP6V0A1-203ENST00000393829 PCDHB15Q9Y5E8 787 aa18.7■□□□□ 0.58
ATP6V0A1-203ENST00000393829 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
ATP6V0A1-203ENST00000393829 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
ATP6V0A1-203ENST00000393829 ZNF518AQ6AHZ1 1483 aa18.69■□□□□ 0.58
ATP6V0A1-203ENST00000393829 NLRP1Q9C000 1473 aa18.69■□□□□ 0.58
ATP6V0A1-203ENST00000393829 MTHFSP49914 203 aa18.69■□□□□ 0.58
ATP6V0A1-203ENST00000393829 WDR63Q8IWG1 891 aa18.69■□□□□ 0.58
ATP6V0A1-203ENST00000393829 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
ATP6V0A1-203ENST00000393829 NPATQ14207 1427 aa18.67■□□□□ 0.58
ATP6V0A1-203ENST00000393829 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
ATP6V0A1-203ENST00000393829 AAMPQ13685 434 aa18.65■□□□□ 0.58
ATP6V0A1-203ENST00000393829 CCDC27Q2M243 656 aa18.65■□□□□ 0.58
ATP6V0A1-203ENST00000393829 ASXL2Q76L83 1435 aa18.65■□□□□ 0.58
ATP6V0A1-203ENST00000393829 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
ATP6V0A1-203ENST00000393829 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
ATP6V0A1-203ENST00000393829 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
ATP6V0A1-203ENST00000393829 BECN1Q14457 450 aa18.61■□□□□ 0.57
ATP6V0A1-203ENST00000393829 FRMPD1Q5SYB0 1578 aa18.61■□□□□ 0.57
ATP6V0A1-203ENST00000393829 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
ATP6V0A1-203ENST00000393829 GLI2P10070 1586 aa18.61■□□□□ 0.57
ATP6V0A1-203ENST00000393829 GGT6Q6P531 493 aa18.6■□□□□ 0.57
ATP6V0A1-203ENST00000393829 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
ATP6V0A1-203ENST00000393829 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
ATP6V0A1-203ENST00000393829 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
ATP6V0A1-203ENST00000393829 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
ATP6V0A1-203ENST00000393829 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
ATP6V0A1-203ENST00000393829 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
ATP6V0A1-203ENST00000393829 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.574e-7■□□□□ 10.4
ATP6V0A1-203ENST00000393829 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
ATP6V0A1-203ENST00000393829 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
ATP6V0A1-203ENST00000393829 RWDD1Q9H446 243 aaPredicted RBP18.59■□□□□ 0.57
ATP6V0A1-203ENST00000393829 TBC1D32Q96NH3 1257 aa18.58■□□□□ 0.57
ATP6V0A1-203ENST00000393829 EVC2Q86UK5 1308 aa18.58■□□□□ 0.56
ATP6V0A1-203ENST00000393829 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
ATP6V0A1-203ENST00000393829 HECW2Q9P2P5 1572 aa18.58■□□□□ 0.56
ATP6V0A1-203ENST00000393829 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
ATP6V0A1-203ENST00000393829 NUTM2DQ5VT03 806 aaPredicted RBP18.58■□□□□ 0.56
ATP6V0A1-203ENST00000393829 NSD2O96028 1365 aa18.57■□□□□ 0.56
ATP6V0A1-203ENST00000393829 PUS7Q96PZ0 661 aaKnown RBP18.57■□□□□ 0.56
ATP6V0A1-203ENST00000393829 ANTXR1Q9H6X2 564 aa18.56■□□□□ 0.56
ATP6V0A1-203ENST00000393829 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
ATP6V0A1-203ENST00000393829 ABCC3O15438 1527 aa18.56■□□□□ 0.56
ATP6V0A1-203ENST00000393829 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
ATP6V0A1-203ENST00000393829 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
ATP6V0A1-203ENST00000393829 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
ATP6V0A1-203ENST00000393829 SIGLEC1Q9BZZ2 1709 aa18.55■□□□□ 0.56
ATP6V0A1-203ENST00000393829 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
ATP6V0A1-203ENST00000393829 POGKQ9P215 609 aa18.55■□□□□ 0.56
ATP6V0A1-203ENST00000393829 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
ATP6V0A1-203ENST00000393829 DZIP1LQ8IYY4 767 aaKnown RBP18.54■□□□□ 0.56
ATP6V0A1-203ENST00000393829 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
ATP6V0A1-203ENST00000393829 TBC1D2Q9BYX2 928 aa18.53■□□□□ 0.56
ATP6V0A1-203ENST00000393829 FTSJ3Q8IY81 847 aaKnown RBP18.53■□□□□ 0.56
ATP6V0A1-203ENST00000393829 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
ATP6V0A1-203ENST00000393829 CD109Q6YHK3 1445 aa18.52■□□□□ 0.56
ATP6V0A1-203ENST00000393829 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.55
ATP6V0A1-203ENST00000393829 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.55
ATP6V0A1-203ENST00000393829 PIK3C2BO00750 1634 aa18.51■□□□□ 0.55
ATP6V0A1-203ENST00000393829 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
ATP6V0A1-203ENST00000393829 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
ATP6V0A1-203ENST00000393829 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
ATP6V0A1-203ENST00000393829 VGFO15240 615 aaPredicted RBP18.5■□□□□ 0.55
ATP6V0A1-203ENST00000393829 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
ATP6V0A1-203ENST00000393829 TRIM27P14373 513 aa18.5■□□□□ 0.55
ATP6V0A1-203ENST00000393829 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
ATP6V0A1-203ENST00000393829 ABCC11Q96J66 1382 aa18.5■□□□□ 0.55
ATP6V0A1-203ENST00000393829 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
ATP6V0A1-203ENST00000393829 COL3A1P02461 1466 aaPredicted RBP18.49■□□□□ 0.55
ATP6V0A1-203ENST00000393829 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
ATP6V0A1-203ENST00000393829 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
ATP6V0A1-203ENST00000393829 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
ATP6V0A1-203ENST00000393829 CFAP74Q9C0B2 1584 aa18.48■□□□□ 0.55
ATP6V0A1-203ENST00000393829 HDAC1Q13547 482 aaPredicted RBP18.47■□□□□ 0.55
ATP6V0A1-203ENST00000393829 ITPRIPQ8IWB1 547 aa18.46■□□□□ 0.55
ATP6V0A1-203ENST00000393829 ATF7IPQ6VMQ6 1270 aa18.45■□□□□ 0.54
ATP6V0A1-203ENST00000393829 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms