RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 ADGRB1O14514 1584 aa33.68■■■□□ 2.98
HMGA2-202ENST00000393577 TRIM26Q12899 539 aaPredicted RBP33.66■■■□□ 2.98
HMGA2-202ENST00000393577 PHF23Q9BUL5 403 aaPredicted RBP33.66■■■□□ 2.98
HMGA2-202ENST00000393577 SIRT1Q96EB6 747 aa33.64■■■□□ 2.98
HMGA2-202ENST00000393577 DLC1Q96QB1 1528 aa33.62■■■□□ 2.97
HMGA2-202ENST00000393577 DDX17Q92841 729 aaKnown RBP33.6■■■□□ 2.97
HMGA2-202ENST00000393577 ORAI2Q96SN7 254 aa33.6■■■□□ 2.97
HMGA2-202ENST00000393577 SHPRHQ149N8 1683 aa33.59■■■□□ 2.97
HMGA2-202ENST00000393577 PRAM1Q96QH2 718 aa33.58■■■□□ 2.97
HMGA2-202ENST00000393577 FMN2Q9NZ56 1722 aa33.57■■■□□ 2.96
HMGA2-202ENST00000393577 SAFB2Q14151 953 aaKnown RBP eCLIP33.56■■■□□ 2.96
HMGA2-202ENST00000393577 TRAK1Q9UPV9 953 aa33.56■■■□□ 2.96
HMGA2-202ENST00000393577 SIN3AQ96ST3 1273 aa33.55■■■□□ 2.96
HMGA2-202ENST00000393577 NUTM2FA1L443 756 aa33.54■■■□□ 2.96
HMGA2-202ENST00000393577 POGKQ9P215 609 aa33.54■■■□□ 2.96
HMGA2-202ENST00000393577 ESCO1Q5FWF5 840 aa33.52■■■□□ 2.96
HMGA2-202ENST00000393577 KIAA1210Q9ULL0 1709 aa33.51■■■□□ 2.96
HMGA2-202ENST00000393577 SPATA31A6Q5VVP1 1343 aa33.51■■■□□ 2.95
HMGA2-202ENST00000393577 LRRC59Q96AG4 307 aaKnown RBP33.49■■■□□ 2.95
HMGA2-202ENST00000393577 LRP6O75581 1613 aa33.49■■■□□ 2.95
HMGA2-202ENST00000393577 NEUROD1Q13562 356 aa33.48■■■□□ 2.95
HMGA2-202ENST00000393577 ARHGEF28Q8N1W1 1705 aaKnown RBP33.48■■■□□ 2.95
HMGA2-202ENST00000393577 ADGRB2O60241 1585 aa33.46■■■□□ 2.95
HMGA2-202ENST00000393577 L3MBTL2Q969R5 705 aa33.45■■■□□ 2.95
HMGA2-202ENST00000393577 RGS17Q9UGC6 210 aaPredicted RBP33.45■■■□□ 2.95
HMGA2-202ENST00000393577 RGPD8O14715 1765 aaPredicted RBP33.44■■■□□ 2.94
HMGA2-202ENST00000393577 SOS2Q07890 1332 aaPredicted RBP33.44■■■□□ 2.94
HMGA2-202ENST00000393577 NPHP3Q7Z494 1330 aa33.42■■■□□ 2.94
HMGA2-202ENST00000393577 PNPLA6Q8IY17 1366 aa33.42■■■□□ 2.94
HMGA2-202ENST00000393577 MINK1Q8N4C8 1332 aaPredicted RBP33.41■■■□□ 2.94
HMGA2-202ENST00000393577 KIF1AQ12756 1690 aa33.41■■■□□ 2.94
HMGA2-202ENST00000393577 NUTM2BA6NNL0 878 aaPredicted RBP33.4■■■□□ 2.94
HMGA2-202ENST00000393577 NUTM2EB1AL46 878 aaPredicted RBP33.4■■■□□ 2.94
HMGA2-202ENST00000393577 NUTM2AQ8IVF1 878 aaPredicted RBP33.4■■■□□ 2.94
HMGA2-202ENST00000393577 HIRIP3Q9BW71 556 aaPredicted RBP33.4■■■□□ 2.94
HMGA2-202ENST00000393577 FOXO3O43524 673 aa33.39■■■□□ 2.94
HMGA2-202ENST00000393577 NBPF1Q3BBV0 1214 aa33.39■■■□□ 2.94
HMGA2-202ENST00000393577 MEX3CQ5U5Q3 659 aaKnown RBP33.39■■■□□ 2.94
HMGA2-202ENST00000393577 PXDNQ92626 1479 aa33.37■■■□□ 2.93
HMGA2-202ENST00000393577 XPCQ01831 940 aaPredicted RBP33.36■■■□□ 2.93
HMGA2-202ENST00000393577 USP32Q8NFA0 1604 aa33.35■■■□□ 2.93
HMGA2-202ENST00000393577 ANKARQ7Z5J8 1434 aa33.33■■■□□ 2.93
HMGA2-202ENST00000393577 SOCS7O14512 581 aa33.32■■■□□ 2.92
HMGA2-202ENST00000393577 PHF8Q9UPP1 1060 aa33.31■■■□□ 2.92
HMGA2-202ENST00000393577 TRPM1Q7Z4N2 1603 aa33.31■■■□□ 2.92
HMGA2-202ENST00000393577 TULP4Q9NRJ4 1543 aa33.29■■■□□ 2.92
HMGA2-202ENST00000393577 POTEAQ6S8J7 498 aa33.29■■■□□ 2.92
HMGA2-202ENST00000393577 EIF3AQ14152 1382 aaKnown RBP33.29■■■□□ 2.92
HMGA2-202ENST00000393577 COL22A1Q8NFW1 1626 aaPredicted RBP33.28■■■□□ 2.92
HMGA2-202ENST00000393577 WASLO00401 505 aaPredicted RBP33.28■■■□□ 2.92
HMGA2-202ENST00000393577 PRR36Q9H6K5 1346 aa33.25■■■□□ 2.91
HMGA2-202ENST00000393577 KRT28Q7Z3Y7 464 aa33.23■■■□□ 2.91
HMGA2-202ENST00000393577 PMFBP1Q8TBY8 1022 aa33.23■■■□□ 2.91
HMGA2-202ENST00000393577 TONSLQ96HA7 1378 aa33.21■■■□□ 2.91
HMGA2-202ENST00000393577 ADAMTS2O95450 1211 aa33.19■■■□□ 2.9
HMGA2-202ENST00000393577 C8orf37Q96NL8 207 aa33.19■■■□□ 2.9
HMGA2-202ENST00000393577 SPATA31A3Q5VYP0 1347 aa33.19■■■□□ 2.9
HMGA2-202ENST00000393577 ROCK2O75116 1388 aaKnown RBP33.19■■■□□ 2.9
HMGA2-202ENST00000393577 QRICH2Q9H0J4 1663 aa33.18■■■□□ 2.9
HMGA2-202ENST00000393577 ZNF772Q68DY9 489 aaPredicted RBP33.18■■■□□ 2.9
HMGA2-202ENST00000393577 ITSN1Q15811 1721 aa33.18■■■□□ 2.9
HMGA2-202ENST00000393577 CENPJQ9HC77 1338 aaPredicted RBP33.18■■■□□ 2.9
HMGA2-202ENST00000393577 ATP7BP35670 1465 aa33.18■■■□□ 2.9
HMGA2-202ENST00000393577 PSME1Q06323 249 aa33.17■■■□□ 2.9
HMGA2-202ENST00000393577 NBPF8Q3BBV2 869 aa33.17■■■□□ 2.9
HMGA2-202ENST00000393577 AFF2P51816 1311 aa33.17■■■□□ 2.9
HMGA2-202ENST00000393577 CDK19Q9BWU1 502 aa33.16■■■□□ 2.9
HMGA2-202ENST00000393577 TNS3Q68CZ2 1445 aa33.15■■■□□ 2.9
HMGA2-202ENST00000393577 NUDT16Q96DE0 195 aaKnown RBP33.13■■■□□ 2.89
HMGA2-202ENST00000393577 SBNO1A3KN83 1393 aa33.12■■■□□ 2.89
HMGA2-202ENST00000393577 TRPM3Q9HCF6 1732 aaPredicted RBP33.11■■■□□ 2.89
HMGA2-202ENST00000393577 MARF1Q9Y4F3 1742 aaKnown RBP33.1■■■□□ 2.89
HMGA2-202ENST00000393577 TOPAZ1Q8N9V7 1692 aa33.1■■■□□ 2.89
HMGA2-202ENST00000393577 NGLY1Q96IV0 654 aa33.09■■■□□ 2.89
HMGA2-202ENST00000393577 PCGF6Q9BYE7 350 aa33.09■■■□□ 2.89
HMGA2-202ENST00000393577 GPRASP1Q5JY77 1395 aa33.09■■■□□ 2.89
HMGA2-202ENST00000393577 NGDNQ8NEJ9 315 aaKnown RBP33.08■■■□□ 2.89
HMGA2-202ENST00000393577 LMOD2Q6P5Q4 547 aa33.06■■■□□ 2.88
HMGA2-202ENST00000393577 ARHGEF10O15013 1369 aa33.05■■■□□ 2.88
HMGA2-202ENST00000393577 SRPK2P78362 688 aaKnown RBP33.04■■■□□ 2.88
HMGA2-202ENST00000393577 RALGAPBQ86X10 1494 aa33.04■■■□□ 2.88
HMGA2-202ENST00000393577 ALS2Q96Q42 1657 aa33.02■■■□□ 2.88
HMGA2-202ENST00000393577 PLEKHG5O94827 1062 aa33.02■■■□□ 2.88
HMGA2-202ENST00000393577 CCDC61Q9Y6R9 512 aa33.02■■■□□ 2.88
HMGA2-202ENST00000393577 ABCA3Q99758 1704 aa33.02■■■□□ 2.88
HMGA2-202ENST00000393577 CABP2Q9NPB3 220 aa33■■■□□ 2.87
HMGA2-202ENST00000393577 RXRBP28702 533 aa32.99■■■□□ 2.87
HMGA2-202ENST00000393577 CABLES1Q8TDN4 633 aa32.99■■■□□ 2.87
HMGA2-202ENST00000393577 CARD11Q9BXL7 1154 aa32.99■■■□□ 2.87
HMGA2-202ENST00000393577 HAP1P54257 671 aaPredicted RBP32.98■■■□□ 2.87
HMGA2-202ENST00000393577 FNBP4Q8N3X1 1017 aaPredicted RBP32.97■■■□□ 2.87
HMGA2-202ENST00000393577 QTRT2Q9H974 415 aaKnown RBP32.97■■■□□ 2.87
HMGA2-202ENST00000393577 USP21Q9UK80 565 aa32.97■■■□□ 2.87
HMGA2-202ENST00000393577 POLR3AO14802 1390 aaPredicted RBP32.96■■■□□ 2.87
HMGA2-202ENST00000393577 PAK3O75914 559 aaPredicted RBP32.96■■■□□ 2.87
HMGA2-202ENST00000393577 ACEP12821 1306 aa32.96■■■□□ 2.87
HMGA2-202ENST00000393577 PPIP5K1Q6PFW1 1433 aa32.95■■■□□ 2.87
HMGA2-202ENST00000393577 PLEKHG3A1L390 1219 aa32.95■■■□□ 2.87
HMGA2-202ENST00000393577 EVC2Q86UK5 1308 aa32.95■■■□□ 2.86
HMGA2-202ENST00000393577 BCL9LQ86UU0 1499 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms