RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
LRRK1-201ENST00000388948 GOLGA6L19H0YKK7 550 aa18.12■□□□□ 0.49
LRRK1-201ENST00000388948 GOLGA6L1Q8N7Z2 621 aa18.11■□□□□ 0.49
LRRK1-201ENST00000388948 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
LRRK1-201ENST00000388948 BECN2A8MW95 431 aa18.11■□□□□ 0.49
LRRK1-201ENST00000388948 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
LRRK1-201ENST00000388948 ERC2O15083 957 aa18.1■□□□□ 0.49
LRRK1-201ENST00000388948 CABP4P57796 275 aa18.1■□□□□ 0.49
LRRK1-201ENST00000388948 POGZQ7Z3K3 1410 aa18.1■□□□□ 0.49
LRRK1-201ENST00000388948 REC8O95072 547 aa18.1■□□□□ 0.49
LRRK1-201ENST00000388948 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
LRRK1-201ENST00000388948 TMEM132AQ24JP5 1023 aa18.09■□□□□ 0.49
LRRK1-201ENST00000388948 SAFBQ15424 915 aaKnown RBP eCLIP18.09■□□□□ 0.49
LRRK1-201ENST00000388948 TBC1D2BQ9UPU7 963 aa18.09■□□□□ 0.49
LRRK1-201ENST00000388948 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
LRRK1-201ENST00000388948 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.49
LRRK1-201ENST00000388948 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
LRRK1-201ENST00000388948 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.49
LRRK1-201ENST00000388948 STAC3Q96MF2 364 aa18.08■□□□□ 0.48
LRRK1-201ENST00000388948 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
LRRK1-201ENST00000388948 RBM5P52756 815 aaKnown RBP eCLIP18.07■□□□□ 0.48
LRRK1-201ENST00000388948 ANKRD20A12PQ8NF67 263 aa18.07■□□□□ 0.48
LRRK1-201ENST00000388948 CNNM1Q9NRU3 951 aa18.07■□□□□ 0.48
LRRK1-201ENST00000388948 FOSBP53539 338 aa18.07■□□□□ 0.48
LRRK1-201ENST00000388948 ATP2B2Q01814 1243 aa18.06■□□□□ 0.48
LRRK1-201ENST00000388948 WWC2Q6AWC2 1192 aa18.06■□□□□ 0.48
LRRK1-201ENST00000388948 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
LRRK1-201ENST00000388948 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
LRRK1-201ENST00000388948 RAPGEF3O95398 923 aa18.05■□□□□ 0.48
LRRK1-201ENST00000388948 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-201ENST00000388948 IPO7O95373 1038 aaKnown RBP18.04■□□□□ 0.48
LRRK1-201ENST00000388948 XPCQ01831 940 aaPredicted RBP18.04■□□□□ 0.48
LRRK1-201ENST00000388948 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
LRRK1-201ENST00000388948 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
LRRK1-201ENST00000388948 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
LRRK1-201ENST00000388948 ARID3AQ99856 593 aa18.03■□□□□ 0.48
LRRK1-201ENST00000388948 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
LRRK1-201ENST00000388948 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
LRRK1-201ENST00000388948 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
LRRK1-201ENST00000388948 ANKRD50Q9ULJ7 1429 aa18.03■□□□□ 0.48
LRRK1-201ENST00000388948 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
LRRK1-201ENST00000388948 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
LRRK1-201ENST00000388948 GOLGA6L3A6NEY3 463 aa18.02■□□□□ 0.48
LRRK1-201ENST00000388948 CCAR2Q8N163 923 aaKnown RBP18.02■□□□□ 0.48
LRRK1-201ENST00000388948 IGF1RP08069 1367 aa18.02■□□□□ 0.48
LRRK1-201ENST00000388948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.02■□□□□ 0.47
LRRK1-201ENST00000388948 CT47A1Q5JQC4 288 aaPredicted RBP18.02■□□□□ 0.47
LRRK1-201ENST00000388948 XBP1P17861 261 aa18.01■□□□□ 0.47
LRRK1-201ENST00000388948 ODF2Q5BJF6 829 aa18.01■□□□□ 0.47
LRRK1-201ENST00000388948 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
LRRK1-201ENST00000388948 FYCO1Q9BQS8 1478 aa18.01■□□□□ 0.47
LRRK1-201ENST00000388948 SART3Q15020 963 aaKnown RBP18.01■□□□□ 0.47
LRRK1-201ENST00000388948 CUX1P39880 1505 aa18.01■□□□□ 0.47
LRRK1-201ENST00000388948 PAF1Q8N7H5 531 aa18■□□□□ 0.47
LRRK1-201ENST00000388948 KDM4AO75164 1064 aa18■□□□□ 0.47
LRRK1-201ENST00000388948 BICD2Q8TD16 824 aa18■□□□□ 0.47
LRRK1-201ENST00000388948 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
LRRK1-201ENST00000388948 MTHFSP49914 203 aa18■□□□□ 0.47
LRRK1-201ENST00000388948 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
LRRK1-201ENST00000388948 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
LRRK1-201ENST00000388948 FAM161AQ3B820 660 aa17.99■□□□□ 0.47
LRRK1-201ENST00000388948 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
LRRK1-201ENST00000388948 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
LRRK1-201ENST00000388948 BICDL1Q6ZP65 573 aa17.99■□□□□ 0.47
LRRK1-201ENST00000388948 CDK19Q9BWU1 502 aa17.99■□□□□ 0.47
LRRK1-201ENST00000388948 VPS37CA5D8V6 355 aaPredicted RBP17.98■□□□□ 0.47
LRRK1-201ENST00000388948 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
LRRK1-201ENST00000388948 MPHOSPH8Q99549 860 aa17.98■□□□□ 0.47
LRRK1-201ENST00000388948 FSD1Q9BTV5 496 aa17.98■□□□□ 0.47
LRRK1-201ENST00000388948 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
LRRK1-201ENST00000388948 CLASRPQ8N2M8 674 aaKnown RBP17.98■□□□□ 0.47
LRRK1-201ENST00000388948 EPS15P42566 896 aa17.98■□□□□ 0.47
LRRK1-201ENST00000388948 ADAMTS2O95450 1211 aa17.97■□□□□ 0.47
LRRK1-201ENST00000388948 MYL6BP14649 208 aa17.97■□□□□ 0.47
LRRK1-201ENST00000388948 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
LRRK1-201ENST00000388948 TTC39AQ5SRH9 613 aa17.97■□□□□ 0.47
LRRK1-201ENST00000388948 DDX49Q9Y6V7 483 aaKnown RBP17.97■□□□□ 0.47
LRRK1-201ENST00000388948 ZC3H6P61129 1189 aaKnown RBP17.97■□□□□ 0.47
LRRK1-201ENST00000388948 CCDC70Q6NSX1 233 aa17.97■□□□□ 0.47
LRRK1-201ENST00000388948 ZSCAN29Q8IWY8 852 aaPredicted RBP17.96■□□□□ 0.47
LRRK1-201ENST00000388948 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
LRRK1-201ENST00000388948 ZFYVE27Q5T4F4 411 aa17.96■□□□□ 0.47
LRRK1-201ENST00000388948 SURF6O75683 361 aaKnown RBP17.96■□□□□ 0.47
LRRK1-201ENST00000388948 INTS3Q68E01 1043 aaKnown RBP17.95■□□□□ 0.46
LRRK1-201ENST00000388948 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 CCDC158Q5M9N0 1113 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 SLC52A1Q9NWF4 448 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 RRP1P56182 461 aaKnown RBP17.95■□□□□ 0.46
LRRK1-201ENST00000388948 PAXIP1Q6ZW49 1069 aaPredicted RBP17.95■□□□□ 0.46
LRRK1-201ENST00000388948 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
LRRK1-201ENST00000388948 DDX11L8A8MPP1 907 aa17.94■□□□□ 0.46
LRRK1-201ENST00000388948 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
LRRK1-201ENST00000388948 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
LRRK1-201ENST00000388948 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
LRRK1-201ENST00000388948 HDGFL1Q5TGJ6 251 aa17.93■□□□□ 0.46
LRRK1-201ENST00000388948 GNAI3P08754 354 aa17.93■□□□□ 0.46
LRRK1-201ENST00000388948 NGLY1Q96IV0 654 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms