RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.51
SEC13-203ENST00000383801 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
SEC13-203ENST00000383801 STK26Q9P289 416 aa18.26■□□□□ 0.51
SEC13-203ENST00000383801 NSD2O96028 1365 aa18.26■□□□□ 0.51
SEC13-203ENST00000383801 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
SEC13-203ENST00000383801 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
SEC13-203ENST00000383801 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
SEC13-203ENST00000383801 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
SEC13-203ENST00000383801 CEBPAP49715 358 aaPredicted RBP18.22■□□□□ 0.51
SEC13-203ENST00000383801 MED14O60244 1454 aa18.22■□□□□ 0.51
SEC13-203ENST00000383801 CGNL1Q0VF96 1302 aa18.22■□□□□ 0.51
SEC13-203ENST00000383801 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
SEC13-203ENST00000383801 CPS1P31327 1500 aa18.21■□□□□ 0.51
SEC13-203ENST00000383801 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
SEC13-203ENST00000383801 ADAMTSL3P82987 1691 aa18.21■□□□□ 0.51
SEC13-203ENST00000383801 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
SEC13-203ENST00000383801 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
SEC13-203ENST00000383801 TXNDC2Q86VQ3 553 aa18.2■□□□□ 0.5
SEC13-203ENST00000383801 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
SEC13-203ENST00000383801 METP08581 1390 aa18.2■□□□□ 0.5
SEC13-203ENST00000383801 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
SEC13-203ENST00000383801 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
SEC13-203ENST00000383801 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
SEC13-203ENST00000383801 CABP2Q9NPB3 220 aa18.18■□□□□ 0.5
SEC13-203ENST00000383801 LTKP29376 864 aa18.17■□□□□ 0.5
SEC13-203ENST00000383801 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
SEC13-203ENST00000383801 MINK1Q8N4C8 1332 aaPredicted RBP18.17■□□□□ 0.5
SEC13-203ENST00000383801 BCANQ96GW7 911 aa18.16■□□□□ 0.5
SEC13-203ENST00000383801 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
SEC13-203ENST00000383801 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
SEC13-203ENST00000383801 PIK3R4Q99570 1358 aa18.15■□□□□ 0.5
SEC13-203ENST00000383801 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
SEC13-203ENST00000383801 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
SEC13-203ENST00000383801 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
SEC13-203ENST00000383801 CEP170BQ9Y4F5 1589 aaPredicted RBP18.14■□□□□ 0.5
SEC13-203ENST00000383801 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.5
SEC13-203ENST00000383801 NEFLP07196 543 aa18.14■□□□□ 0.5
SEC13-203ENST00000383801 MORC1Q86VD1 984 aa18.14■□□□□ 0.5
SEC13-203ENST00000383801 NGEFQ8N5V2 710 aa18.14■□□□□ 0.5
SEC13-203ENST00000383801 ATP7BP35670 1465 aa18.14■□□□□ 0.49
SEC13-203ENST00000383801 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
SEC13-203ENST00000383801 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
SEC13-203ENST00000383801 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■■□□ 17.5
SEC13-203ENST00000383801 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
SEC13-203ENST00000383801 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
SEC13-203ENST00000383801 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
SEC13-203ENST00000383801 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
SEC13-203ENST00000383801 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
SEC13-203ENST00000383801 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
SEC13-203ENST00000383801 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
SEC13-203ENST00000383801 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
SEC13-203ENST00000383801 CCDC61Q9Y6R9 512 aa18.08■□□□□ 0.49
SEC13-203ENST00000383801 ANKRD26Q9UPS8 1709 aa18.08■□□□□ 0.49
SEC13-203ENST00000383801 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
SEC13-203ENST00000383801 ZNF692Q9BU19 519 aaPredicted RBP18.07■□□□□ 0.48
SEC13-203ENST00000383801 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
SEC13-203ENST00000383801 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
SEC13-203ENST00000383801 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
SEC13-203ENST00000383801 CFAP53Q96M91 514 aa18.07■□□□□ 0.48
SEC13-203ENST00000383801 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
SEC13-203ENST00000383801 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
SEC13-203ENST00000383801 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
SEC13-203ENST00000383801 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
SEC13-203ENST00000383801 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
SEC13-203ENST00000383801 AMOTL2Q9Y2J4 779 aa18.04■□□□□ 0.48
SEC13-203ENST00000383801 FYB1O15117 783 aa18.03■□□□□ 0.48
SEC13-203ENST00000383801 EDC4Q6P2E9 1401 aaKnown RBP18.03■□□□□ 0.48
SEC13-203ENST00000383801 PTPRUQ92729 1446 aa18.03■□□□□ 0.48
SEC13-203ENST00000383801 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
SEC13-203ENST00000383801 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
SEC13-203ENST00000383801 CDC42BPGQ6DT37 1551 aa18.02■□□□□ 0.48
SEC13-203ENST00000383801 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
SEC13-203ENST00000383801 KIF20BQ96Q89 1820 aa18.01■□□□□ 0.47
SEC13-203ENST00000383801 FKBP8Q14318 412 aa18.01■□□□□ 0.47
SEC13-203ENST00000383801 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
SEC13-203ENST00000383801 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
SEC13-203ENST00000383801 MTHFSP49914 203 aa17.99■□□□□ 0.47
SEC13-203ENST00000383801 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
SEC13-203ENST00000383801 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
SEC13-203ENST00000383801 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
SEC13-203ENST00000383801 AKAP12Q02952 1782 aa17.98■□□□□ 0.47
SEC13-203ENST00000383801 RNF123Q5XPI4 1314 aa17.97■□□□□ 0.47
SEC13-203ENST00000383801 TOPAZ1Q8N9V7 1692 aa17.96■□□□□ 0.47
SEC13-203ENST00000383801 CHD2O14647 1828 aaKnown RBP17.96■□□□□ 0.47
SEC13-203ENST00000383801 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
SEC13-203ENST00000383801 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
SEC13-203ENST00000383801 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
SEC13-203ENST00000383801 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
SEC13-203ENST00000383801 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
SEC13-203ENST00000383801 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
SEC13-203ENST00000383801 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
SEC13-203ENST00000383801 PNNQ9H307 717 aaKnown RBP17.94■□□□□ 0.46
SEC13-203ENST00000383801 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
SEC13-203ENST00000383801 PRR36Q9H6K5 1346 aa17.93■□□□□ 0.46
SEC13-203ENST00000383801 TNNT2P45379 298 aaPredicted RBP17.91■□□□□ 0.46
SEC13-203ENST00000383801 GOLGA2Q08379 1002 aa17.91■□□□□ 0.46
SEC13-203ENST00000383801 NPHP4O75161 1426 aaPredicted RBP17.9■□□□□ 0.46
SEC13-203ENST00000383801 CCDC27Q2M243 656 aa17.89■□□□□ 0.45
SEC13-203ENST00000383801 KCNA6P17658 529 aa17.88■□□□□ 0.45
SEC13-203ENST00000383801 COG3Q96JB2 828 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms