RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LRP6O75581 1613 aa19.18■□□□□ 0.66
RPAIN-202ENST00000381208 NHSL1Q5SYE7 1610 aa19.18■□□□□ 0.66
RPAIN-202ENST00000381208 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
RPAIN-202ENST00000381208 TECPR2O15040 1411 aa19.17■□□□□ 0.66
RPAIN-202ENST00000381208 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
RPAIN-202ENST00000381208 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
RPAIN-202ENST00000381208 PIK3C2GO75747 1445 aa19.16■□□□□ 0.66
RPAIN-202ENST00000381208 HRCP23327 699 aa19.15■□□□□ 0.66
RPAIN-202ENST00000381208 SOS2Q07890 1332 aaPredicted RBP19.14■□□□□ 0.65
RPAIN-202ENST00000381208 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
RPAIN-202ENST00000381208 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
RPAIN-202ENST00000381208 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
RPAIN-202ENST00000381208 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
RPAIN-202ENST00000381208 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
RPAIN-202ENST00000381208 ORAI2Q96SN7 254 aa19.13■□□□□ 0.65
RPAIN-202ENST00000381208 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
RPAIN-202ENST00000381208 IFT172Q9UG01 1749 aa19.12■□□□□ 0.65
RPAIN-202ENST00000381208 C14orf93Q9H972 538 aaKnown RBP19.12■□□□□ 0.65
RPAIN-202ENST00000381208 STK26Q9P289 416 aa19.12■□□□□ 0.65
RPAIN-202ENST00000381208 LAMC1P11047 1609 aa19.11■□□□□ 0.65
RPAIN-202ENST00000381208 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
RPAIN-202ENST00000381208 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
RPAIN-202ENST00000381208 MYOM2P54296 1465 aa19.11■□□□□ 0.65
RPAIN-202ENST00000381208 STAC3Q96MF2 364 aa19.1■□□□□ 0.65
RPAIN-202ENST00000381208 YTHDC2Q9H6S0 1430 aaKnown RBP19.1■□□□□ 0.65
RPAIN-202ENST00000381208 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
RPAIN-202ENST00000381208 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
RPAIN-202ENST00000381208 ESCO1Q5FWF5 840 aa19.09■□□□□ 0.65
RPAIN-202ENST00000381208 TMEM132EQ6IEE7 984 aa19.09■□□□□ 0.65
RPAIN-202ENST00000381208 RXRBP28702 533 aa19.08■□□□□ 0.65
RPAIN-202ENST00000381208 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.65
RPAIN-202ENST00000381208 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
RPAIN-202ENST00000381208 AFF2P51816 1311 aa19.07■□□□□ 0.64
RPAIN-202ENST00000381208 C8orf37Q96NL8 207 aa19.06■□□□□ 0.64
RPAIN-202ENST00000381208 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
RPAIN-202ENST00000381208 CFAP70Q5T0N1 1121 aa19.04■□□□□ 0.64
RPAIN-202ENST00000381208 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
RPAIN-202ENST00000381208 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
RPAIN-202ENST00000381208 FOXO3O43524 673 aa19.02■□□□□ 0.64
RPAIN-202ENST00000381208 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
RPAIN-202ENST00000381208 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
RPAIN-202ENST00000381208 ADAMTS2O95450 1211 aa19■□□□□ 0.63
RPAIN-202ENST00000381208 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
RPAIN-202ENST00000381208 PXDNQ92626 1479 aa18.99■□□□□ 0.63
RPAIN-202ENST00000381208 DLC1Q96QB1 1528 aa18.99■□□□□ 0.63
RPAIN-202ENST00000381208 NUTM2FA1L443 756 aa18.98■□□□□ 0.63
RPAIN-202ENST00000381208 PRAM1Q96QH2 718 aa18.98■□□□□ 0.63
RPAIN-202ENST00000381208 POGKQ9P215 609 aa18.98■□□□□ 0.63
RPAIN-202ENST00000381208 FNBP4Q8N3X1 1017 aaPredicted RBP18.97■□□□□ 0.63
RPAIN-202ENST00000381208 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
RPAIN-202ENST00000381208 COL22A1Q8NFW1 1626 aaPredicted RBP18.97■□□□□ 0.63
RPAIN-202ENST00000381208 TRPC5Q9UL62 973 aaPredicted RBP18.96■□□□□ 0.63
RPAIN-202ENST00000381208 PSME1Q06323 249 aa18.95■□□□□ 0.62
RPAIN-202ENST00000381208 USP21Q9UK80 565 aa18.95■□□□□ 0.62
RPAIN-202ENST00000381208 KIF1AQ12756 1690 aa18.95■□□□□ 0.62
RPAIN-202ENST00000381208 FMN2Q9NZ56 1722 aa18.95■□□□□ 0.62
RPAIN-202ENST00000381208 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
RPAIN-202ENST00000381208 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
RPAIN-202ENST00000381208 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
RPAIN-202ENST00000381208 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
RPAIN-202ENST00000381208 SPATA31A3Q5VYP0 1347 aa18.93■□□□□ 0.62
RPAIN-202ENST00000381208 ANKARQ7Z5J8 1434 aa18.93■□□□□ 0.62
RPAIN-202ENST00000381208 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
RPAIN-202ENST00000381208 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
RPAIN-202ENST00000381208 ADGRB1O14514 1584 aa18.92■□□□□ 0.62
RPAIN-202ENST00000381208 SAFB2Q14151 953 aaKnown RBP eCLIP18.92■□□□□ 0.62
RPAIN-202ENST00000381208 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
RPAIN-202ENST00000381208 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
RPAIN-202ENST00000381208 RGS12O14924 1447 aa18.88■□□□□ 0.61
RPAIN-202ENST00000381208 ADGRB2O60241 1585 aa18.88■□□□□ 0.61
RPAIN-202ENST00000381208 ATRNO75882 1429 aa18.87■□□□□ 0.61
RPAIN-202ENST00000381208 TNS3Q68CZ2 1445 aa18.87■□□□□ 0.61
RPAIN-202ENST00000381208 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
RPAIN-202ENST00000381208 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
RPAIN-202ENST00000381208 DSG3P32926 999 aa18.85■□□□□ 0.61
RPAIN-202ENST00000381208 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
RPAIN-202ENST00000381208 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
RPAIN-202ENST00000381208 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
RPAIN-202ENST00000381208 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
RPAIN-202ENST00000381208 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.61
RPAIN-202ENST00000381208 ATAD2Q6PL18 1390 aa18.83■□□□□ 0.6
RPAIN-202ENST00000381208 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
RPAIN-202ENST00000381208 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
RPAIN-202ENST00000381208 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
RPAIN-202ENST00000381208 PMFBP1Q8TBY8 1022 aa18.81■□□□□ 0.6
RPAIN-202ENST00000381208 MARF1Q9Y4F3 1742 aaKnown RBP18.81■□□□□ 0.6
RPAIN-202ENST00000381208 KCNA4P22459 653 aa18.81■□□□□ 0.6
RPAIN-202ENST00000381208 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
RPAIN-202ENST00000381208 SLIT2O94813 1529 aa18.8■□□□□ 0.6
RPAIN-202ENST00000381208 RGPD8O14715 1765 aaPredicted RBP18.79■□□□□ 0.6
RPAIN-202ENST00000381208 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
RPAIN-202ENST00000381208 CAPN15O75808 1086 aa18.78■□□□□ 0.6
RPAIN-202ENST00000381208 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
RPAIN-202ENST00000381208 PRR36Q9H6K5 1346 aa18.77■□□□□ 0.6
RPAIN-202ENST00000381208 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.77■□□□□ 0.59
RPAIN-202ENST00000381208 KIAA1210Q9ULL0 1709 aa18.76■□□□□ 0.59
RPAIN-202ENST00000381208 VPS72Q15906 364 aa18.75■□□□□ 0.59
RPAIN-202ENST00000381208 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
RPAIN-202ENST00000381208 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
RPAIN-202ENST00000381208 NUDT16Q96DE0 195 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms