RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 SIRT1Q96EB6 747 aa34.44■■■■□ 3.1
TM6SF1-204ENST00000379390 LRRC7Q96NW7 1537 aa34.43■■■■□ 3.1
TM6SF1-204ENST00000379390 TMEM94Q12767 1356 aa34.39■■■■□ 3.1
TM6SF1-204ENST00000379390 MINK1Q8N4C8 1332 aaPredicted RBP34.38■■■■□ 3.09
TM6SF1-204ENST00000379390 ADGRB2O60241 1585 aa34.35■■■■□ 3.09
TM6SF1-204ENST00000379390 ADGRL3Q9HAR2 1447 aa34.34■■■■□ 3.09
TM6SF1-204ENST00000379390 C14orf37Q86TY3 774 aa34.33■■■■□ 3.09
TM6SF1-204ENST00000379390 TESK2Q96S53 571 aa34.33■■■■□ 3.09
TM6SF1-204ENST00000379390 SBNO2Q9Y2G9 1366 aa34.33■■■■□ 3.09
TM6SF1-204ENST00000379390 TULP4Q9NRJ4 1543 aa34.31■■■■□ 3.08
TM6SF1-204ENST00000379390 CDC42BPGQ6DT37 1551 aa34.28■■■■□ 3.08
TM6SF1-204ENST00000379390 NCOA3Q9Y6Q9 1424 aa34.27■■■■□ 3.08
TM6SF1-204ENST00000379390 FMN2Q9NZ56 1722 aa34.25■■■■□ 3.07
TM6SF1-204ENST00000379390 DISP3Q9P2K9 1392 aa34.25■■■■□ 3.07
TM6SF1-204ENST00000379390 RGPD8O14715 1765 aaPredicted RBP34.22■■■■□ 3.07
TM6SF1-204ENST00000379390 MSH6P52701 1360 aa34.21■■■■□ 3.07
TM6SF1-204ENST00000379390 EVC2Q86UK5 1308 aa34.2■■■■□ 3.07
TM6SF1-204ENST00000379390 C19orf44Q9H6X5 657 aa34.19■■■■□ 3.06
TM6SF1-204ENST00000379390 TMF1P82094 1093 aa34.19■■■■□ 3.06
TM6SF1-204ENST00000379390 WASLO00401 505 aaPredicted RBP34.18■■■■□ 3.06
TM6SF1-204ENST00000379390 DCCP43146 1447 aa34.17■■■■□ 3.06
TM6SF1-204ENST00000379390 USP32Q8NFA0 1604 aa34.17■■■■□ 3.06
TM6SF1-204ENST00000379390 CDK19Q9BWU1 502 aa34.16■■■■□ 3.06
TM6SF1-204ENST00000379390 C11orf95C9JLR9 678 aaPredicted RBP34.15■■■■□ 3.06
TM6SF1-204ENST00000379390 NUTM2FA1L443 756 aa34.14■■■■□ 3.06
TM6SF1-204ENST00000379390 SRPK2P78362 688 aaKnown RBP34.14■■■■□ 3.06
TM6SF1-204ENST00000379390 SLC24A1O60721 1099 aa34.13■■■■□ 3.05
TM6SF1-204ENST00000379390 CABP2Q9NPB3 220 aa34.13■■■■□ 3.05
TM6SF1-204ENST00000379390 ITSN1Q15811 1721 aa34.11■■■■□ 3.05
TM6SF1-204ENST00000379390 ATF3P18847 181 aa34.11■■■■□ 3.05
TM6SF1-204ENST00000379390 ATP7BP35670 1465 aa34.1■■■■□ 3.05
TM6SF1-204ENST00000379390 TOPAZ1Q8N9V7 1692 aa34.1■■■■□ 3.05
TM6SF1-204ENST00000379390 MYOM1P52179 1685 aa34.08■■■■□ 3.05
TM6SF1-204ENST00000379390 POLR3GLQ9BT43 218 aa34.08■■■■□ 3.05
TM6SF1-204ENST00000379390 CADPS2Q86UW7 1296 aa34.07■■■■□ 3.04
TM6SF1-204ENST00000379390 KIF7Q2M1P5 1343 aa34.07■■■■□ 3.04
TM6SF1-204ENST00000379390 PRR36Q9H6K5 1346 aa34.07■■■■□ 3.04
TM6SF1-204ENST00000379390 MST1RQ04912 1400 aa34.06■■■■□ 3.04
TM6SF1-204ENST00000379390 CERKQ8TCT0 537 aa34.06■■■■□ 3.04
TM6SF1-204ENST00000379390 IQSEC2Q5JU85 1478 aa34.05■■■■□ 3.04
TM6SF1-204ENST00000379390 CDCA8Q53HL2 280 aa34.04■■■■□ 3.04
TM6SF1-204ENST00000379390 WASHC2AQ641Q2 1341 aa34.04■■■■□ 3.04
TM6SF1-204ENST00000379390 ANKARQ7Z5J8 1434 aa34.04■■■■□ 3.04
TM6SF1-204ENST00000379390 CCDC7Q96M83 1385 aa34.03■■■■□ 3.04
TM6SF1-204ENST00000379390 ZNF316A6NFI3 1004 aaPredicted RBP34.02■■■■□ 3.04
TM6SF1-204ENST00000379390 NUDT16Q96DE0 195 aaKnown RBP34.02■■■■□ 3.04
TM6SF1-204ENST00000379390 ATAD2Q6PL18 1390 aa34.01■■■■□ 3.04
TM6SF1-204ENST00000379390 C1orf167Q5SNV9 1468 aa34.01■■■■□ 3.03
TM6SF1-204ENST00000379390 PUS7Q96PZ0 661 aaKnown RBP33.97■■■■□ 3.03
TM6SF1-204ENST00000379390 PPIP5K1Q6PFW1 1433 aa33.97■■■■□ 3.03
TM6SF1-204ENST00000379390 SLAIN2Q9P270 581 aa33.94■■■■□ 3.02
TM6SF1-204ENST00000379390 CCDC61Q9Y6R9 512 aa33.94■■■■□ 3.02
TM6SF1-204ENST00000379390 TMC1Q8TDI8 760 aa33.93■■■■□ 3.02
TM6SF1-204ENST00000379390 KIF1AQ12756 1690 aa33.93■■■■□ 3.02
TM6SF1-204ENST00000379390 ESCO1Q5FWF5 840 aa33.92■■■■□ 3.02
TM6SF1-204ENST00000379390 ORAI2Q96SN7 254 aa33.92■■■■□ 3.02
TM6SF1-204ENST00000379390 AKAP12Q02952 1782 aa33.91■■■■□ 3.02
TM6SF1-204ENST00000379390 CABP1Q9NZU7 370 aa33.9■■■■□ 3.02
TM6SF1-204ENST00000379390 ROBO1Q9Y6N7 1651 aa33.9■■■■□ 3.02
TM6SF1-204ENST00000379390 SLC12A5Q9H2X9 1139 aa33.9■■■■□ 3.02
TM6SF1-204ENST00000379390 PMFBP1Q8TBY8 1022 aa33.89■■■■□ 3.02
TM6SF1-204ENST00000379390 UBAP1LF5GYI3 381 aa33.88■■■■□ 3.01
TM6SF1-204ENST00000379390 NINLQ9Y2I6 1382 aa33.87■■■■□ 3.01
TM6SF1-204ENST00000379390 TOM1O60784 492 aa33.86■■■■□ 3.01
TM6SF1-204ENST00000379390 PHF8Q9UPP1 1060 aa33.86■■■■□ 3.01
TM6SF1-204ENST00000379390 CD163L1Q9NR16 1453 aa33.84■■■■□ 3.01
TM6SF1-204ENST00000379390 MON2Q7Z3U7 1717 aa33.83■■■■□ 3.01
TM6SF1-204ENST00000379390 BRINP3Q76B58 766 aa33.83■■■■□ 3.01
TM6SF1-204ENST00000379390 PLEKHG3A1L390 1219 aa33.82■■■■□ 3
TM6SF1-204ENST00000379390 ACEP12821 1306 aa33.81■■■■□ 3
TM6SF1-204ENST00000379390 PIP4K2BP78356 416 aa33.8■■■■□ 3
TM6SF1-204ENST00000379390 NHSL1Q5SYE7 1610 aa33.8■■■■□ 3
TM6SF1-204ENST00000379390 A0A1W2PP64 1363 aa33.79■■■■□ 3
TM6SF1-204ENST00000379390 NGDNQ8NEJ9 315 aaKnown RBP33.79■■■■□ 3
TM6SF1-204ENST00000379390 POLR3AO14802 1390 aaPredicted RBP33.79■■■■□ 3
TM6SF1-204ENST00000379390 SCAF1Q9H7N4 1312 aaKnown RBP33.79■■■■□ 3
TM6SF1-204ENST00000379390 CPSF1Q10570 1443 aaKnown RBP33.77■■■■□ 3
TM6SF1-204ENST00000379390 ANKRD36BQ8N2N9 1353 aa33.77■■■■□ 3
TM6SF1-204ENST00000379390 FOXO3O43524 673 aa33.76■■■■□ 3
TM6SF1-204ENST00000379390 DDX10Q13206 875 aaKnown RBP33.75■■■□□ 2.99
TM6SF1-204ENST00000379390 DDX17Q92841 729 aaKnown RBP33.75■■■□□ 2.99
TM6SF1-204ENST00000379390 TERF2IPQ9NYB0 399 aa33.75■■■□□ 2.99
TM6SF1-204ENST00000379390 NRKQ7Z2Y5 1582 aa33.75■■■□□ 2.99
TM6SF1-204ENST00000379390 PANK3Q9H999 370 aa33.74■■■□□ 2.99
TM6SF1-204ENST00000379390 HDGFL2Q7Z4V5 671 aaPredicted RBP33.73■■■□□ 2.99
TM6SF1-204ENST00000379390 KTN1Q86UP2 1357 aaKnown RBP33.73■■■□□ 2.99
TM6SF1-204ENST00000379390 XPCQ01831 940 aaPredicted RBP33.71■■■□□ 2.99
TM6SF1-204ENST00000379390 TRPM3Q9HCF6 1732 aaPredicted RBP33.71■■■□□ 2.99
TM6SF1-204ENST00000379390 USP6P35125 1406 aa33.71■■■□□ 2.99
TM6SF1-204ENST00000379390 NPHP3Q7Z494 1330 aa33.69■■■□□ 2.98
TM6SF1-204ENST00000379390 PHLPP1O60346 1717 aa33.69■■■□□ 2.98
TM6SF1-204ENST00000379390 AHDC1Q5TGY3 1603 aaPredicted RBP33.69■■■□□ 2.98
TM6SF1-204ENST00000379390 PSME1Q06323 249 aa33.68■■■□□ 2.98
TM6SF1-204ENST00000379390 CARD14Q9BXL6 1004 aa33.68■■■□□ 2.98
TM6SF1-204ENST00000379390 PXDNQ92626 1479 aa33.67■■■□□ 2.98
TM6SF1-204ENST00000379390 NSD3Q9BZ95 1437 aa33.67■■■□□ 2.98
TM6SF1-204ENST00000379390 ZNF692Q9BU19 519 aaPredicted RBP33.66■■■□□ 2.98
TM6SF1-204ENST00000379390 KIF20BQ96Q89 1820 aa33.66■■■□□ 2.98
TM6SF1-204ENST00000379390 EDC4Q6P2E9 1401 aaKnown RBP33.65■■■□□ 2.98
TM6SF1-204ENST00000379390 KRT28Q7Z3Y7 464 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms