RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 NBPF1Q3BBV0 1214 aa16.98■□□□□ 0.31
PCNA-201ENST00000379143 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
PCNA-201ENST00000379143 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
PCNA-201ENST00000379143 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
PCNA-201ENST00000379143 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
PCNA-201ENST00000379143 GPRASP1Q5JY77 1395 aa16.96■□□□□ 0.31
PCNA-201ENST00000379143 DCCP43146 1447 aa16.95■□□□□ 0.3
PCNA-201ENST00000379143 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
PCNA-201ENST00000379143 POGKQ9P215 609 aa16.95■□□□□ 0.3
PCNA-201ENST00000379143 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
PCNA-201ENST00000379143 WAPLQ7Z5K2 1190 aa16.94■□□□□ 0.3
PCNA-201ENST00000379143 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
PCNA-201ENST00000379143 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
PCNA-201ENST00000379143 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
PCNA-201ENST00000379143 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
PCNA-201ENST00000379143 ATF3P18847 181 aa16.93■□□□□ 0.3
PCNA-201ENST00000379143 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
PCNA-201ENST00000379143 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
PCNA-201ENST00000379143 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
PCNA-201ENST00000379143 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
PCNA-201ENST00000379143 CDC42BPGQ6DT37 1551 aa16.9■□□□□ 0.3
PCNA-201ENST00000379143 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
PCNA-201ENST00000379143 SAFB2Q14151 953 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCNA-201ENST00000379143 ADGRB2O60241 1585 aa16.87■□□□□ 0.29
PCNA-201ENST00000379143 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
PCNA-201ENST00000379143 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
PCNA-201ENST00000379143 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
PCNA-201ENST00000379143 MST1RQ04912 1400 aa16.83■□□□□ 0.29
PCNA-201ENST00000379143 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
PCNA-201ENST00000379143 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
PCNA-201ENST00000379143 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
PCNA-201ENST00000379143 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
PCNA-201ENST00000379143 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
PCNA-201ENST00000379143 SBNO2Q9Y2G9 1366 aa16.81■□□□□ 0.28
PCNA-201ENST00000379143 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
PCNA-201ENST00000379143 USP47Q96K76 1375 aa16.8■□□□□ 0.28
PCNA-201ENST00000379143 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
PCNA-201ENST00000379143 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
PCNA-201ENST00000379143 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
PCNA-201ENST00000379143 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
PCNA-201ENST00000379143 ST20-MTHFSA0A0A6YYL1 179 aa16.77■□□□□ 0.28
PCNA-201ENST00000379143 BRINP3Q76B58 766 aa16.76■□□□□ 0.27
PCNA-201ENST00000379143 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
PCNA-201ENST00000379143 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
PCNA-201ENST00000379143 ZEB1P37275 1124 aaPredicted RBP16.75■□□□□ 0.27
PCNA-201ENST00000379143 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
PCNA-201ENST00000379143 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
PCNA-201ENST00000379143 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
PCNA-201ENST00000379143 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
PCNA-201ENST00000379143 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
PCNA-201ENST00000379143 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
PCNA-201ENST00000379143 ITSN1Q15811 1721 aa16.74■□□□□ 0.27
PCNA-201ENST00000379143 ATP7BP35670 1465 aa16.73■□□□□ 0.27
PCNA-201ENST00000379143 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
PCNA-201ENST00000379143 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
PCNA-201ENST00000379143 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
PCNA-201ENST00000379143 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
PCNA-201ENST00000379143 TESK2Q96S53 571 aa16.71■□□□□ 0.27
PCNA-201ENST00000379143 TMF1P82094 1093 aa16.7■□□□□ 0.26
PCNA-201ENST00000379143 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
PCNA-201ENST00000379143 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
PCNA-201ENST00000379143 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
PCNA-201ENST00000379143 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
PCNA-201ENST00000379143 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
PCNA-201ENST00000379143 PRR36Q9H6K5 1346 aa16.69■□□□□ 0.26
PCNA-201ENST00000379143 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
PCNA-201ENST00000379143 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
PCNA-201ENST00000379143 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
PCNA-201ENST00000379143 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
PCNA-201ENST00000379143 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
PCNA-201ENST00000379143 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
PCNA-201ENST00000379143 PPIP5K1Q6PFW1 1433 aa16.66■□□□□ 0.26
PCNA-201ENST00000379143 FOXO3O43524 673 aa16.66■□□□□ 0.26
PCNA-201ENST00000379143 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
PCNA-201ENST00000379143 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
PCNA-201ENST00000379143 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
PCNA-201ENST00000379143 PSME1Q06323 249 aa16.64■□□□□ 0.25
PCNA-201ENST00000379143 NGDNQ8NEJ9 315 aaKnown RBP16.64■□□□□ 0.25
PCNA-201ENST00000379143 POLR3AO14802 1390 aaPredicted RBP16.63■□□□□ 0.25
PCNA-201ENST00000379143 JCADQ9P266 1359 aa16.63■□□□□ 0.25
PCNA-201ENST00000379143 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
PCNA-201ENST00000379143 PXDNQ92626 1479 aa16.63■□□□□ 0.25
PCNA-201ENST00000379143 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
PCNA-201ENST00000379143 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
PCNA-201ENST00000379143 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
PCNA-201ENST00000379143 ACEP12821 1306 aa16.61■□□□□ 0.25
PCNA-201ENST00000379143 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
PCNA-201ENST00000379143 LRP6O75581 1613 aa16.6■□□□□ 0.25
PCNA-201ENST00000379143 SHPRHQ149N8 1683 aa16.6■□□□□ 0.25
PCNA-201ENST00000379143 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
PCNA-201ENST00000379143 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
PCNA-201ENST00000379143 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
PCNA-201ENST00000379143 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
PCNA-201ENST00000379143 XPCQ01831 940 aaPredicted RBP16.57■□□□□ 0.24
PCNA-201ENST00000379143 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
PCNA-201ENST00000379143 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
PCNA-201ENST00000379143 HDGFL2Q7Z4V5 671 aaPredicted RBP16.56■□□□□ 0.24
PCNA-201ENST00000379143 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
PCNA-201ENST00000379143 CPSF1Q10570 1443 aaKnown RBP16.56■□□□□ 0.24
PCNA-201ENST00000379143 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms