RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 DCCP43146 1447 aa9.94□□□□□ -0.82
GPCPD1-201ENST00000379019 MYOM2P54296 1465 aa9.94□□□□□ -0.82
GPCPD1-201ENST00000379019 IDI1Q13907 227 aa9.94□□□□□ -0.82
GPCPD1-201ENST00000379019 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
GPCPD1-201ENST00000379019 TXNDC2Q86VQ3 553 aa9.93□□□□□ -0.82
GPCPD1-201ENST00000379019 NEXMIFQ5QGS0 1516 aa9.93□□□□□ -0.82
GPCPD1-201ENST00000379019 USP47Q96K76 1375 aa9.93□□□□□ -0.82
GPCPD1-201ENST00000379019 PER1O15534 1290 aaPredicted RBP9.93□□□□□ -0.82
GPCPD1-201ENST00000379019 PCNTO95613 3336 aa9.93□□□□□ -0.82
GPCPD1-201ENST00000379019 KCNA6P17658 529 aa9.93□□□□□ -0.82
GPCPD1-201ENST00000379019 CCDC144AA2RUR9 1427 aa9.92□□□□□ -0.82
GPCPD1-201ENST00000379019 PDE4AP27815 886 aa9.92□□□□□ -0.82
GPCPD1-201ENST00000379019 BACH2Q9BYV9 841 aa9.92□□□□□ -0.82
GPCPD1-201ENST00000379019 IFT172Q9UG01 1749 aa9.92□□□□□ -0.82
GPCPD1-201ENST00000379019 PPLO60437 1756 aa9.92□□□□□ -0.82
GPCPD1-201ENST00000379019 CHD2O14647 1828 aaKnown RBP9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 VGFO15240 615 aaPredicted RBP9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 TNNQ9UQP3 1299 aa9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 USP19O94966 1318 aa9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 SLC4A1APQ9BWU0 796 aaKnown RBP9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 XRN1Q8IZH2 1706 aaKnown RBP9.91□□□□□ -0.82
GPCPD1-201ENST00000379019 KNDC1Q76NI1 1749 aa9.9□□□□□ -0.82
GPCPD1-201ENST00000379019 PLPPR3Q6T4P5 718 aa9.9□□□□□ -0.82
GPCPD1-201ENST00000379019 LRRC7Q96NW7 1537 aa9.9□□□□□ -0.82
GPCPD1-201ENST00000379019 PTCH1Q13635 1447 aa9.9□□□□□ -0.83
GPCPD1-201ENST00000379019 PLEKHH1Q9ULM0 1364 aa9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 RRP1P56182 461 aaKnown RBP9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 NRXN1Q9ULB1 1477 aa9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 SIRT1Q96EB6 747 aa9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 CRBNQ96SW2 442 aa9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 DISP3Q9P2K9 1392 aa9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 TOM1O60784 492 aa9.89□□□□□ -0.83
GPCPD1-201ENST00000379019 FRAT1Q92837 279 aaPredicted RBP9.88□□□□□ -0.83
GPCPD1-201ENST00000379019 MYO5BQ9ULV0 1848 aa9.88□□□□□ -0.83
GPCPD1-201ENST00000379019 NEFMP07197 916 aa9.88□□□□□ -0.83
GPCPD1-201ENST00000379019 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
GPCPD1-201ENST00000379019 FRAT2O75474 233 aaPredicted RBP9.87□□□□□ -0.83
GPCPD1-201ENST00000379019 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
GPCPD1-201ENST00000379019 ADAMTS13Q76LX8 1427 aa9.87□□□□□ -0.83
GPCPD1-201ENST00000379019 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
GPCPD1-201ENST00000379019 ALKQ9UM73 1620 aa9.86□□□□□ -0.83
GPCPD1-201ENST00000379019 DLC1Q96QB1 1528 aa9.86□□□□□ -0.83
GPCPD1-201ENST00000379019 TECPR2O15040 1411 aa9.86□□□□□ -0.83
GPCPD1-201ENST00000379019 FAM135BQ49AJ0 1406 aa9.85□□□□□ -0.83
GPCPD1-201ENST00000379019 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
GPCPD1-201ENST00000379019 LTKP29376 864 aa9.85□□□□□ -0.83
GPCPD1-201ENST00000379019 KDM2BQ8NHM5 1336 aa9.84□□□□□ -0.83
GPCPD1-201ENST00000379019 CC2D1BQ5T0F9 858 aaKnown RBP9.84□□□□□ -0.83
GPCPD1-201ENST00000379019 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
GPCPD1-201ENST00000379019 MSH6P52701 1360 aa9.84□□□□□ -0.83
GPCPD1-201ENST00000379019 EIF3AQ14152 1382 aaKnown RBP9.84□□□□□ -0.83
GPCPD1-201ENST00000379019 TESK2Q96S53 571 aa9.83□□□□□ -0.84
GPCPD1-201ENST00000379019 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
GPCPD1-201ENST00000379019 STRCP1A6NGW2 1772 aa9.83□□□□□ -0.84
GPCPD1-201ENST00000379019 IGHDP01880 384 aa9.83□□□□□ -0.84
GPCPD1-201ENST00000379019 ZNF335Q9H4Z2 1342 aaPredicted RBP9.83□□□□□ -0.84
GPCPD1-201ENST00000379019 CFAP65Q6ZU64 1925 aaKnown RBP9.82□□□□□ -0.84
GPCPD1-201ENST00000379019 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
GPCPD1-201ENST00000379019 POGKQ9P215 609 aa9.82□□□□□ -0.84
GPCPD1-201ENST00000379019 ZBTB47Q9UFB7 747 aaPredicted RBP9.82□□□□□ -0.84
GPCPD1-201ENST00000379019 RRAGDQ9NQL2 400 aaPredicted RBP9.81□□□□□ -0.84
GPCPD1-201ENST00000379019 ADAMTS8Q9UP79 889 aa9.81□□□□□ -0.84
GPCPD1-201ENST00000379019 RCAN3Q9UKA8 241 aa9.81□□□□□ -0.84
GPCPD1-201ENST00000379019 CDC42BPGQ6DT37 1551 aa9.81□□□□□ -0.84
GPCPD1-201ENST00000379019 XIRP1Q702N8 1843 aaKnown RBP9.81□□□□□ -0.84
GPCPD1-201ENST00000379019 TRPM1Q7Z4N2 1603 aa9.8□□□□□ -0.84
GPCPD1-201ENST00000379019 AHDC1Q5TGY3 1603 aaPredicted RBP9.8□□□□□ -0.84
GPCPD1-201ENST00000379019 BCAR3O75815 825 aa9.8□□□□□ -0.84
GPCPD1-201ENST00000379019 ADGRL3Q9HAR2 1447 aa9.8□□□□□ -0.84
GPCPD1-201ENST00000379019 ABCC11Q96J66 1382 aa9.8□□□□□ -0.84
GPCPD1-201ENST00000379019 RGL3Q3MIN7 710 aa9.79□□□□□ -0.84
GPCPD1-201ENST00000379019 PARD3Q8TEW0 1356 aa9.79□□□□□ -0.84
GPCPD1-201ENST00000379019 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
GPCPD1-201ENST00000379019 ADGRB2O60241 1585 aa9.79□□□□□ -0.84
GPCPD1-201ENST00000379019 AK9Q5TCS8 1911 aa9.79□□□□□ -0.84
GPCPD1-201ENST00000379019 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
GPCPD1-201ENST00000379019 ILDR1Q86SU0 546 aaPredicted RBP9.78□□□□□ -0.84
GPCPD1-201ENST00000379019 KIF1AQ12756 1690 aa9.78□□□□□ -0.84
GPCPD1-201ENST00000379019 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
GPCPD1-201ENST00000379019 TMC1Q8TDI8 760 aa9.77□□□□□ -0.84
GPCPD1-201ENST00000379019 TMEM94Q12767 1356 aa9.77□□□□□ -0.84
GPCPD1-201ENST00000379019 CCDC146Q8IYE0 955 aa9.77□□□□□ -0.85
GPCPD1-201ENST00000379019 PANK2Q9BZ23 570 aa9.77□□□□□ -0.85
GPCPD1-201ENST00000379019 C19orf44Q9H6X5 657 aa9.77□□□□□ -0.85
GPCPD1-201ENST00000379019 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 DUSP27Q5VZP5 1158 aa9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 ERICH6BQ5W0A0 696 aa9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 VIRMAQ69YN4 1812 aaKnown RBP9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 MYOM1P52179 1685 aa9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
GPCPD1-201ENST00000379019 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
GPCPD1-201ENST00000379019 ZNF521Q96K83 1311 aa9.75□□□□□ -0.85
GPCPD1-201ENST00000379019 ANKARQ7Z5J8 1434 aa9.75□□□□□ -0.85
GPCPD1-201ENST00000379019 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
GPCPD1-201ENST00000379019 C14orf93Q9H972 538 aaKnown RBP9.75□□□□□ -0.85
GPCPD1-201ENST00000379019 ARXQ96QS3 562 aa9.74□□□□□ -0.85
GPCPD1-201ENST00000379019 NHSL1Q5SYE7 1610 aa9.74□□□□□ -0.85
GPCPD1-201ENST00000379019 PTPRUQ92729 1446 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms