RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 RBM19Q9Y4C8 960 aaKnown RBP26.46■■□□□ 1.83
SKI-201ENST00000378536 SMG6Q86US8 1419 aaKnown RBP26.46■■□□□ 1.83
SKI-201ENST00000378536 GAS2L2Q8NHY3 880 aa26.45■■□□□ 1.82
SKI-201ENST00000378536 A2MP01023 1474 aa26.45■■□□□ 1.82
SKI-201ENST00000378536 TCOF1Q13428 1488 aaKnown RBP26.45■■□□□ 1.82
SKI-201ENST00000378536 NUDT16Q96DE0 195 aaKnown RBP26.44■■□□□ 1.82
SKI-201ENST00000378536 DDX58O95786 925 aaKnown RBP26.44■■□□□ 1.82
SKI-201ENST00000378536 KIF16BQ96L93 1317 aa26.44■■□□□ 1.82
SKI-201ENST00000378536 MFAP1P55081 439 aaKnown RBP26.43■■□□□ 1.82
SKI-201ENST00000378536 WAPLQ7Z5K2 1190 aa26.43■■□□□ 1.82
SKI-201ENST00000378536 CCDC61Q9Y6R9 512 aa26.43■■□□□ 1.82
SKI-201ENST00000378536 NOS1P29475 1434 aa26.42■■□□□ 1.82
SKI-201ENST00000378536 TRAPPC8Q9Y2L5 1435 aa26.42■■□□□ 1.82
SKI-201ENST00000378536 FKBP5Q13451 457 aaPredicted RBP26.42■■□□□ 1.82
SKI-201ENST00000378536 C9orf78Q9NZ63 289 aaPredicted RBP26.42■■□□□ 1.82
SKI-201ENST00000378536 SPRYD3Q8NCJ5 442 aa26.41■■□□□ 1.82
SKI-201ENST00000378536 PLEKHO1Q53GL0 409 aaPredicted RBP26.4■■□□□ 1.82
SKI-201ENST00000378536 ANKRD45Q5TZF3 282 aa26.4■■□□□ 1.82
SKI-201ENST00000378536 NSD3Q9BZ95 1437 aa26.39■■□□□ 1.82
SKI-201ENST00000378536 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
SKI-201ENST00000378536 ABCC10Q5T3U5 1492 aa26.36■■□□□ 1.81
SKI-201ENST00000378536 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
SKI-201ENST00000378536 SULT6B1Q6IMI4 303 aa26.35■■□□□ 1.81
SKI-201ENST00000378536 TNRQ92752 1358 aa26.34■■□□□ 1.81
SKI-201ENST00000378536 SCAF11Q99590 1463 aaKnown RBP26.34■■□□□ 1.81
SKI-201ENST00000378536 C14orf93Q9H972 538 aaKnown RBP26.34■■□□□ 1.81
SKI-201ENST00000378536 TRIM44Q96DX7 344 aaPredicted RBP26.33■■□□□ 1.81
SKI-201ENST00000378536 AMOTL2Q9Y2J4 779 aa26.33■■□□□ 1.81
SKI-201ENST00000378536 GOLGA6L4A6NEF3 574 aa26.33■■□□□ 1.81
SKI-201ENST00000378536 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.81
SKI-201ENST00000378536 USP35Q9P2H5 1018 aa26.31■■□□□ 1.8
SKI-201ENST00000378536 SHANK2Q9UPX8 1470 aa26.31■■□□□ 1.8
SKI-201ENST00000378536 G3V3G9 751 aa26.31■■□□□ 1.8
SKI-201ENST00000378536 DCAF8Q5TAQ9 597 aa26.31■■□□□ 1.8
SKI-201ENST00000378536 TATP17735 454 aaPredicted RBP26.31■■□□□ 1.8
SKI-201ENST00000378536 STRN4Q9NRL3 753 aa26.3■■□□□ 1.8
SKI-201ENST00000378536 CDCA7LQ96GN5 454 aa26.3■■□□□ 1.8
SKI-201ENST00000378536 ISY1Q9ULR0 285 aaKnown RBP26.3■■□□□ 1.8
SKI-201ENST00000378536 FRAT2O75474 233 aaPredicted RBP26.3■■□□□ 1.8
SKI-201ENST00000378536 RRS1Q15050 365 aaKnown RBP26.3■■□□□ 1.8
SKI-201ENST00000378536 SAMD9Q5K651 1589 aa26.3■■□□□ 1.8
SKI-201ENST00000378536 CDK11BP21127 795 aaKnown RBP26.28■■□□□ 1.8
SKI-201ENST00000378536 WASLO00401 505 aaPredicted RBP26.27■■□□□ 1.8
SKI-201ENST00000378536 MSH5O43196 834 aa26.27■■□□□ 1.8
SKI-201ENST00000378536 XPCQ01831 940 aaPredicted RBP26.27■■□□□ 1.8
SKI-201ENST00000378536 C11orf95C9JLR9 678 aaPredicted RBP26.26■■□□□ 1.79
SKI-201ENST00000378536 RILPL2Q969X0 211 aa26.26■■□□□ 1.79
SKI-201ENST00000378536 RIC3Q7Z5B4 369 aa26.25■■□□□ 1.79
SKI-201ENST00000378536 CCDC30Q5VVM6 783 aa26.25■■□□□ 1.79
SKI-201ENST00000378536 AAMPQ13685 434 aa26.25■■□□□ 1.79
SKI-201ENST00000378536 GNL2Q13823 731 aaKnown RBP26.25■■□□□ 1.79
SKI-201ENST00000378536 EXOSC9Q06265 439 aaKnown RBP26.24■■□□□ 1.79
SKI-201ENST00000378536 PTMAP06454 111 aaKnown RBP26.24■■□□□ 1.79
SKI-201ENST00000378536 TOM1L2Q6ZVM7 507 aa26.24■■□□□ 1.79
SKI-201ENST00000378536 AIMP1Q12904 312 aaKnown RBP26.23■■□□□ 1.79
SKI-201ENST00000378536 PANK1Q8TE04 598 aa26.23■■□□□ 1.79
SKI-201ENST00000378536 KCNH5Q8NCM2 988 aa26.23■■□□□ 1.79
SKI-201ENST00000378536 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
SKI-201ENST00000378536 PRDM11Q9NQV5 511 aa26.22■■□□□ 1.79
SKI-201ENST00000378536 TWISTNBQ3B726 338 aaPredicted RBP26.21■■□□□ 1.79
SKI-201ENST00000378536 FCHSD2O94868 740 aa26.21■■□□□ 1.79
SKI-201ENST00000378536 WDR63Q8IWG1 891 aa26.21■■□□□ 1.79
SKI-201ENST00000378536 UHRF1BP1LA0JNW5 1464 aa26.2■■□□□ 1.79
SKI-201ENST00000378536 ZNF530Q6P9A1 599 aaPredicted RBP26.2■■□□□ 1.78
SKI-201ENST00000378536 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
SKI-201ENST00000378536 SPG7Q9UQ90 795 aa26.19■■□□□ 1.78
SKI-201ENST00000378536 SLKQ9H2G2 1235 aaPredicted RBP26.19■■□□□ 1.78
SKI-201ENST00000378536 G3BP1Q13283 466 aaKnown RBP eCLIP26.18■■□□□ 1.78
SKI-201ENST00000378536 DNMT1P26358 1616 aaKnown RBP26.18■■□□□ 1.78
SKI-201ENST00000378536 HSP90B1P14625 803 aaKnown RBP26.18■■□□□ 1.78
SKI-201ENST00000378536 CCDC184Q52MB2 194 aa26.18■■□□□ 1.78
SKI-201ENST00000378536 IFIT2P09913 472 aaKnown RBP26.18■■□□□ 1.78
SKI-201ENST00000378536 TSR2Q969E8 191 aaKnown RBP26.18■■□□□ 1.78
SKI-201ENST00000378536 PHF8Q9UPP1 1060 aa26.18■■□□□ 1.78
SKI-201ENST00000378536 NUTM2BA6NNL0 878 aaPredicted RBP26.17■■□□□ 1.78
SKI-201ENST00000378536 NUTM2EB1AL46 878 aaPredicted RBP26.17■■□□□ 1.78
SKI-201ENST00000378536 NUTM2AQ8IVF1 878 aaPredicted RBP26.17■■□□□ 1.78
SKI-201ENST00000378536 TSHZ2Q9NRE2 1034 aa26.17■■□□□ 1.78
SKI-201ENST00000378536 GBP4Q96PP9 640 aa26.16■■□□□ 1.78
SKI-201ENST00000378536 HSP90AB4PQ58FF6 505 aa26.16■■□□□ 1.78
SKI-201ENST00000378536 PDE4AP27815 886 aa26.16■■□□□ 1.78
SKI-201ENST00000378536 UBTFL1P0CB47 393 aaPredicted RBP26.15■■□□□ 1.78
SKI-201ENST00000378536 NME9Q86XW9 330 aa26.15■■□□□ 1.78
SKI-201ENST00000378536 ST18O60284 1047 aa26.15■■□□□ 1.78
SKI-201ENST00000378536 PLCB2Q00722 1185 aa26.15■■□□□ 1.78
SKI-201ENST00000378536 ZC3H6P61129 1189 aaKnown RBP26.14■■□□□ 1.78
SKI-201ENST00000378536 LRRFIP1Q32MZ4 808 aaKnown RBP26.13■■□□□ 1.77
SKI-201ENST00000378536 DIAPH3Q9NSV4 1193 aa26.13■■□□□ 1.77
SKI-201ENST00000378536 PIP4K2BP78356 416 aa26.13■■□□□ 1.77
SKI-201ENST00000378536 CABP4P57796 275 aa26.13■■□□□ 1.77
SKI-201ENST00000378536 DISP3Q9P2K9 1392 aa26.13■■□□□ 1.77
SKI-201ENST00000378536 IPO9Q96P70 1041 aaKnown RBP26.12■■□□□ 1.77
SKI-201ENST00000378536 NINLQ9Y2I6 1382 aa26.12■■□□□ 1.77
SKI-201ENST00000378536 CT47B1P0C2W7 299 aaPredicted RBP26.11■■□□□ 1.77
SKI-201ENST00000378536 RBM33Q96EV2 1170 aaKnown RBP26.11■■□□□ 1.77
SKI-201ENST00000378536 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
SKI-201ENST00000378536 TOMM22Q9NS69 142 aa26.11■■□□□ 1.77
SKI-201ENST00000378536 RBM42Q9BTD8 480 aaKnown RBP26.11■■□□□ 1.77
SKI-201ENST00000378536 RIMS2Q9UQ26 1411 aa26.11■■□□□ 1.77
SKI-201ENST00000378536 NOL8Q76FK4 1167 aaKnown RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms