RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
DEPDC4-202ENST00000378244 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
DEPDC4-202ENST00000378244 SLAIN2Q9P270 581 aa16.62■□□□□ 0.25
DEPDC4-202ENST00000378244 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
DEPDC4-202ENST00000378244 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
DEPDC4-202ENST00000378244 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
DEPDC4-202ENST00000378244 FBXO41Q8TF61 875 aa16.6■□□□□ 0.25
DEPDC4-202ENST00000378244 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
DEPDC4-202ENST00000378244 GPRASP1Q5JY77 1395 aa16.59■□□□□ 0.25
DEPDC4-202ENST00000378244 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
DEPDC4-202ENST00000378244 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
DEPDC4-202ENST00000378244 DLC1Q96QB1 1528 aa16.58■□□□□ 0.25
DEPDC4-202ENST00000378244 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.58■□□□□ 0.25
DEPDC4-202ENST00000378244 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
DEPDC4-202ENST00000378244 ARHGEF28Q8N1W1 1705 aaKnown RBP16.56■□□□□ 0.24
DEPDC4-202ENST00000378244 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
DEPDC4-202ENST00000378244 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
DEPDC4-202ENST00000378244 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
DEPDC4-202ENST00000378244 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
DEPDC4-202ENST00000378244 DCCP43146 1447 aa16.54■□□□□ 0.24
DEPDC4-202ENST00000378244 WASLO00401 505 aaPredicted RBP16.53■□□□□ 0.24
DEPDC4-202ENST00000378244 USP47Q96K76 1375 aa16.53■□□□□ 0.24
DEPDC4-202ENST00000378244 MST1RQ04912 1400 aa16.53■□□□□ 0.24
DEPDC4-202ENST00000378244 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
DEPDC4-202ENST00000378244 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
DEPDC4-202ENST00000378244 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.24
DEPDC4-202ENST00000378244 BRINP3Q76B58 766 aa16.52■□□□□ 0.23
DEPDC4-202ENST00000378244 CABP2Q9NPB3 220 aa16.52■□□□□ 0.23
DEPDC4-202ENST00000378244 C1orf167Q5SNV9 1468 aa16.5■□□□□ 0.23
DEPDC4-202ENST00000378244 CDC42BPGQ6DT37 1551 aa16.49■□□□□ 0.23
DEPDC4-202ENST00000378244 HSPA1LP34931 641 aa16.49■□□□□ 0.23
DEPDC4-202ENST00000378244 PMFBP1Q8TBY8 1022 aa16.49■□□□□ 0.23
DEPDC4-202ENST00000378244 PRR36Q9H6K5 1346 aa16.49■□□□□ 0.23
DEPDC4-202ENST00000378244 FOXO3O43524 673 aa16.48■□□□□ 0.23
DEPDC4-202ENST00000378244 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
DEPDC4-202ENST00000378244 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
DEPDC4-202ENST00000378244 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
DEPDC4-202ENST00000378244 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
DEPDC4-202ENST00000378244 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
DEPDC4-202ENST00000378244 TESK2Q96S53 571 aa16.47■□□□□ 0.23
DEPDC4-202ENST00000378244 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
DEPDC4-202ENST00000378244 HSPA5P11021 654 aaKnown RBP16.46■□□□□ 0.23
DEPDC4-202ENST00000378244 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
DEPDC4-202ENST00000378244 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
DEPDC4-202ENST00000378244 TULP4Q9NRJ4 1543 aa16.43■□□□□ 0.22
DEPDC4-202ENST00000378244 FMN2Q9NZ56 1722 aa16.43■□□□□ 0.22
DEPDC4-202ENST00000378244 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
DEPDC4-202ENST00000378244 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
DEPDC4-202ENST00000378244 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
DEPDC4-202ENST00000378244 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
DEPDC4-202ENST00000378244 CABP1Q9NZU7 370 aa16.41■□□□□ 0.22
DEPDC4-202ENST00000378244 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
DEPDC4-202ENST00000378244 TMF1P82094 1093 aa16.41■□□□□ 0.22
DEPDC4-202ENST00000378244 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
DEPDC4-202ENST00000378244 ATP7BP35670 1465 aa16.41■□□□□ 0.22
DEPDC4-202ENST00000378244 DISP3Q9P2K9 1392 aa16.4■□□□□ 0.22
DEPDC4-202ENST00000378244 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
DEPDC4-202ENST00000378244 USP32Q8NFA0 1604 aa16.4■□□□□ 0.22
DEPDC4-202ENST00000378244 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
DEPDC4-202ENST00000378244 PSME1Q06323 249 aa16.4■□□□□ 0.22
DEPDC4-202ENST00000378244 NPHP3Q7Z494 1330 aa16.38■□□□□ 0.21
DEPDC4-202ENST00000378244 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
DEPDC4-202ENST00000378244 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
DEPDC4-202ENST00000378244 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
DEPDC4-202ENST00000378244 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
DEPDC4-202ENST00000378244 ACEP12821 1306 aa16.37■□□□□ 0.21
DEPDC4-202ENST00000378244 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
DEPDC4-202ENST00000378244 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
DEPDC4-202ENST00000378244 C11orf95C9JLR9 678 aaPredicted RBP16.35■□□□□ 0.21
DEPDC4-202ENST00000378244 ATAD2Q6PL18 1390 aa16.34■□□□□ 0.21
DEPDC4-202ENST00000378244 SOS2Q07890 1332 aaPredicted RBP16.34■□□□□ 0.21
DEPDC4-202ENST00000378244 LRRC59Q96AG4 307 aaKnown RBP16.34■□□□□ 0.21
DEPDC4-202ENST00000378244 PHLPP1O60346 1717 aa16.34■□□□□ 0.21
DEPDC4-202ENST00000378244 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
DEPDC4-202ENST00000378244 CDCA8Q53HL2 280 aa16.32■□□□□ 0.2
DEPDC4-202ENST00000378244 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
DEPDC4-202ENST00000378244 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 NUTM2AQ8IVF1 878 aaPredicted RBP16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 NHSL1Q5SYE7 1610 aa16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 PXDNQ92626 1479 aa16.3■□□□□ 0.2
DEPDC4-202ENST00000378244 POLR3AO14802 1390 aaPredicted RBP16.29■□□□□ 0.2
DEPDC4-202ENST00000378244 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
DEPDC4-202ENST00000378244 JCADQ9P266 1359 aa16.28■□□□□ 0.2
DEPDC4-202ENST00000378244 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
DEPDC4-202ENST00000378244 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
DEPDC4-202ENST00000378244 SPATA31A3Q5VYP0 1347 aa16.28■□□□□ 0.2
DEPDC4-202ENST00000378244 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
DEPDC4-202ENST00000378244 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
DEPDC4-202ENST00000378244 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
DEPDC4-202ENST00000378244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.2
DEPDC4-202ENST00000378244 TERF2IPQ9NYB0 399 aa16.27■□□□□ 0.2
DEPDC4-202ENST00000378244 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.19
DEPDC4-202ENST00000378244 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
DEPDC4-202ENST00000378244 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
DEPDC4-202ENST00000378244 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
DEPDC4-202ENST00000378244 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
DEPDC4-202ENST00000378244 PNPLA6Q8IY17 1366 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms