RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
CNTNAP3B-203ENST00000377561 PSME1Q06323 249 aa22.91■■□□□ 1.26
CNTNAP3B-203ENST00000377561 TTC5Q8N0Z6 440 aa22.9■■□□□ 1.26
CNTNAP3B-203ENST00000377561 PRAM1Q96QH2 718 aa22.9■■□□□ 1.26
CNTNAP3B-203ENST00000377561 EXOSC9Q06265 439 aaKnown RBP22.9■■□□□ 1.26
CNTNAP3B-203ENST00000377561 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
CNTNAP3B-203ENST00000377561 CHMP4CQ96CF2 233 aa22.9■■□□□ 1.26
CNTNAP3B-203ENST00000377561 GTF2E1P29083 439 aaPredicted RBP22.89■■□□□ 1.25
CNTNAP3B-203ENST00000377561 TOMM22Q9NS69 142 aa22.89■■□□□ 1.25
CNTNAP3B-203ENST00000377561 DDX58O95786 925 aaKnown RBP22.89■■□□□ 1.25
CNTNAP3B-203ENST00000377561 PRKAR2BP31323 418 aa22.88■■□□□ 1.25
CNTNAP3B-203ENST00000377561 FRAT2O75474 233 aaPredicted RBP22.88■■□□□ 1.25
CNTNAP3B-203ENST00000377561 SLC52A1Q9NWF4 448 aa22.88■■□□□ 1.25
CNTNAP3B-203ENST00000377561 IFIT2P09913 472 aaKnown RBP22.87■■□□□ 1.25
CNTNAP3B-203ENST00000377561 ZKSCAN1P17029 563 aaPredicted RBP22.87■■□□□ 1.25
CNTNAP3B-203ENST00000377561 RPGRIP1LQ68CZ1 1315 aa22.87■■□□□ 1.25
CNTNAP3B-203ENST00000377561 NINLQ9Y2I6 1382 aa22.87■■□□□ 1.25
CNTNAP3B-203ENST00000377561 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
CNTNAP3B-203ENST00000377561 WDR63Q8IWG1 891 aa22.87■■□□□ 1.25
CNTNAP3B-203ENST00000377561 BCAR3O75815 825 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 H3BQV1 296 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 HSP90AA2PQ14568 343 aaPredicted RBP22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 IFFO2Q5TF58 517 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 ANO2Q9NQ90 1003 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 CDC45O75419 566 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 NFKBIBQ15653 356 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 HSP90AB4PQ58FF6 505 aa22.86■■□□□ 1.25
CNTNAP3B-203ENST00000377561 C11orf95C9JLR9 678 aaPredicted RBP22.85■■□□□ 1.25
CNTNAP3B-203ENST00000377561 FAM184AQ8NB25 1140 aa22.85■■□□□ 1.25
CNTNAP3B-203ENST00000377561 PDZRN3Q9UPQ7 1066 aa22.85■■□□□ 1.25
CNTNAP3B-203ENST00000377561 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
CNTNAP3B-203ENST00000377561 SF3A1Q15459 793 aaKnown RBP22.84■■□□□ 1.25
CNTNAP3B-203ENST00000377561 CT47B1P0C2W7 299 aaPredicted RBP22.84■■□□□ 1.25
CNTNAP3B-203ENST00000377561 NUCB2P80303 420 aa22.83■■□□□ 1.25
CNTNAP3B-203ENST00000377561 LRRFIP1Q32MZ4 808 aaKnown RBP22.83■■□□□ 1.24
CNTNAP3B-203ENST00000377561 G3BP1Q13283 466 aaKnown RBP eCLIP22.82■■□□□ 1.24
CNTNAP3B-203ENST00000377561 FOXD4L6Q3SYB3 417 aaPredicted RBP22.82■■□□□ 1.24
CNTNAP3B-203ENST00000377561 FOXD4L3Q6VB84 417 aaPredicted RBP22.82■■□□□ 1.24
CNTNAP3B-203ENST00000377561 CREBRFQ8IUR6 639 aa22.82■■□□□ 1.24
CNTNAP3B-203ENST00000377561 GRIN2AQ12879 1464 aa22.82■■□□□ 1.24
CNTNAP3B-203ENST00000377561 NLRP6P59044 892 aa22.82■■□□□ 1.24
CNTNAP3B-203ENST00000377561 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
CNTNAP3B-203ENST00000377561 BACH2Q9BYV9 841 aa22.81■■□□□ 1.24
CNTNAP3B-203ENST00000377561 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
CNTNAP3B-203ENST00000377561 KIF14Q15058 1648 aa22.81■■□□□ 1.24
CNTNAP3B-203ENST00000377561 TSR2Q969E8 191 aaKnown RBP22.8■■□□□ 1.24
CNTNAP3B-203ENST00000377561 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
CNTNAP3B-203ENST00000377561 MARCH6O60337 910 aa22.8■■□□□ 1.24
CNTNAP3B-203ENST00000377561 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
CNTNAP3B-203ENST00000377561 CABP1Q9NZU7 370 aa22.79■■□□□ 1.24
CNTNAP3B-203ENST00000377561 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-203ENST00000377561 RPRD2Q5VT52 1461 aaKnown RBP22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 ERC2O15083 957 aa22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 VSIG10Q8N0Z9 540 aa22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 NOB1Q9ULX3 412 aaKnown RBP22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 EVA1CP58658 441 aa22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 RNF20Q5VTR2 975 aa22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 UBTFL1P0CB47 393 aaPredicted RBP22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 GCC1Q96CN9 775 aa22.78■■□□□ 1.24
CNTNAP3B-203ENST00000377561 GNAI3P08754 354 aa22.77■■□□□ 1.23
CNTNAP3B-203ENST00000377561 A0A0U1RQG5 324 aaPredicted RBP22.76■■□□□ 1.23
CNTNAP3B-203ENST00000377561 CCDC30Q5VVM6 783 aa22.76■■□□□ 1.23
CNTNAP3B-203ENST00000377561 RAPGEF4Q8WZA2 1011 aa22.76■■□□□ 1.23
CNTNAP3B-203ENST00000377561 ZNF692Q9BU19 519 aaPredicted RBP22.76■■□□□ 1.23
CNTNAP3B-203ENST00000377561 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
CNTNAP3B-203ENST00000377561 VPS53Q5VIR6 699 aa22.76■■□□□ 1.23
CNTNAP3B-203ENST00000377561 PDE4CQ08493 712 aa22.75■■□□□ 1.23
CNTNAP3B-203ENST00000377561 TXNDC2Q86VQ3 553 aa22.75■■□□□ 1.23
CNTNAP3B-203ENST00000377561 GOLGA6L1Q8N7Z2 621 aa22.75■■□□□ 1.23
CNTNAP3B-203ENST00000377561 TPM3P06753 285 aa22.75■■□□□ 1.23
CNTNAP3B-203ENST00000377561 SLFN5Q08AF3 891 aa22.75■■□□□ 1.23
CNTNAP3B-203ENST00000377561 CEP89Q96ST8 783 aa22.75■■□□□ 1.23
CNTNAP3B-203ENST00000377561 NUTM2GQ5VZR2 741 aa22.74■■□□□ 1.23
CNTNAP3B-203ENST00000377561 PRM3Q9NNZ6 103 aa22.74■■□□□ 1.23
CNTNAP3B-203ENST00000377561 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
CNTNAP3B-203ENST00000377561 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
CNTNAP3B-203ENST00000377561 ATF7IPQ6VMQ6 1270 aa22.73■■□□□ 1.23
CNTNAP3B-203ENST00000377561 NSD3Q9BZ95 1437 aa22.72■■□□□ 1.23
CNTNAP3B-203ENST00000377561 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
CNTNAP3B-203ENST00000377561 GOLGA6L19H0YKK7 550 aa22.71■■□□□ 1.23
CNTNAP3B-203ENST00000377561 SMC3Q9UQE7 1217 aa22.71■■□□□ 1.23
CNTNAP3B-203ENST00000377561 CPLX2Q6PUV4 134 aaKnown RBP22.71■■□□□ 1.23
CNTNAP3B-203ENST00000377561 RTEL1-TNFRSF6BF6WH68 1400 aa22.71■■□□□ 1.23
CNTNAP3B-203ENST00000377561 MCTP1Q6DN14 999 aa22.7■■□□□ 1.22
CNTNAP3B-203ENST00000377561 WWC1Q8IX03 1113 aa22.7■■□□□ 1.22
CNTNAP3B-203ENST00000377561 RIC3Q7Z5B4 369 aa22.7■■□□□ 1.22
CNTNAP3B-203ENST00000377561 ABTB2Q8N961 1025 aa22.7■■□□□ 1.22
CNTNAP3B-203ENST00000377561 BECN2A8MW95 431 aa22.69■■□□□ 1.22
CNTNAP3B-203ENST00000377561 SULT6B1Q6IMI4 303 aa22.69■■□□□ 1.22
CNTNAP3B-203ENST00000377561 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
CNTNAP3B-203ENST00000377561 GPRASP1Q5JY77 1395 aa22.68■■□□□ 1.22
CNTNAP3B-203ENST00000377561 AKAP17AQ02040 695 aaKnown RBP22.68■■□□□ 1.22
CNTNAP3B-203ENST00000377561 SYNE3Q6ZMZ3 975 aa22.68■■□□□ 1.22
CNTNAP3B-203ENST00000377561 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
CNTNAP3B-203ENST00000377561 FCHSD2O94868 740 aa22.67■■□□□ 1.22
CNTNAP3B-203ENST00000377561 PES1O00541 588 aaKnown RBP22.67■■□□□ 1.22
CNTNAP3B-203ENST00000377561 NLRP2Q9NX02 1062 aa22.67■■□□□ 1.22
CNTNAP3B-203ENST00000377561 TPD52L1Q16890 204 aaPredicted RBP22.66■■□□□ 1.22
CNTNAP3B-203ENST00000377561 AIMP1Q12904 312 aaKnown RBP22.66■■□□□ 1.22
CNTNAP3B-203ENST00000377561 ZNF428Q96B54 188 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms