RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TULP4Q9NRJ4 1543 aa29.97■■■□□ 2.39
CBWD3-202ENST00000377342 SAFB2Q14151 953 aaKnown RBP eCLIP29.97■■■□□ 2.39
CBWD3-202ENST00000377342 POGKQ9P215 609 aa29.96■■■□□ 2.39
CBWD3-202ENST00000377342 LRRC7Q96NW7 1537 aa29.96■■■□□ 2.39
CBWD3-202ENST00000377342 DISP3Q9P2K9 1392 aa29.91■■■□□ 2.38
CBWD3-202ENST00000377342 ADGRL3Q9HAR2 1447 aa29.91■■■□□ 2.38
CBWD3-202ENST00000377342 RBM33Q96EV2 1170 aaKnown RBP29.91■■■□□ 2.38
CBWD3-202ENST00000377342 MINK1Q8N4C8 1332 aaPredicted RBP29.91■■■□□ 2.38
CBWD3-202ENST00000377342 CDC42BPGQ6DT37 1551 aa29.9■■■□□ 2.38
CBWD3-202ENST00000377342 TMEM94Q12767 1356 aa29.9■■■□□ 2.38
CBWD3-202ENST00000377342 PROSER2Q86WR7 435 aaPredicted RBP29.88■■■□□ 2.37
CBWD3-202ENST00000377342 FMN2Q9NZ56 1722 aa29.86■■■□□ 2.37
CBWD3-202ENST00000377342 NCOA3Q9Y6Q9 1424 aa29.85■■■□□ 2.37
CBWD3-202ENST00000377342 C11orf95C9JLR9 678 aaPredicted RBP29.85■■■□□ 2.37
CBWD3-202ENST00000377342 USP32Q8NFA0 1604 aa29.81■■■□□ 2.36
CBWD3-202ENST00000377342 MYOM1P52179 1685 aa29.81■■■□□ 2.36
CBWD3-202ENST00000377342 TMF1P82094 1093 aa29.8■■■□□ 2.36
CBWD3-202ENST00000377342 EVC2Q86UK5 1308 aa29.78■■■□□ 2.36
CBWD3-202ENST00000377342 TOPAZ1Q8N9V7 1692 aa29.78■■■□□ 2.36
CBWD3-202ENST00000377342 KIF7Q2M1P5 1343 aa29.77■■■□□ 2.36
CBWD3-202ENST00000377342 RGPD8O14715 1765 aaPredicted RBP29.77■■■□□ 2.36
CBWD3-202ENST00000377342 ZNF316A6NFI3 1004 aaPredicted RBP29.77■■■□□ 2.36
CBWD3-202ENST00000377342 DCCP43146 1447 aa29.77■■■□□ 2.36
CBWD3-202ENST00000377342 WASHC2AQ641Q2 1341 aa29.77■■■□□ 2.36
CBWD3-202ENST00000377342 CCDC7Q96M83 1385 aa29.77■■■□□ 2.36
CBWD3-202ENST00000377342 WASLO00401 505 aaPredicted RBP29.76■■■□□ 2.36
CBWD3-202ENST00000377342 ATP7BP35670 1465 aa29.76■■■□□ 2.35
CBWD3-202ENST00000377342 SLC24A1O60721 1099 aa29.75■■■□□ 2.35
CBWD3-202ENST00000377342 C14orf37Q86TY3 774 aa29.74■■■□□ 2.35
CBWD3-202ENST00000377342 CDK19Q9BWU1 502 aa29.74■■■□□ 2.35
CBWD3-202ENST00000377342 ITSN1Q15811 1721 aa29.72■■■□□ 2.35
CBWD3-202ENST00000377342 C19orf44Q9H6X5 657 aa29.71■■■□□ 2.35
CBWD3-202ENST00000377342 CABP2Q9NPB3 220 aa29.71■■■□□ 2.35
CBWD3-202ENST00000377342 MSH6P52701 1360 aa29.71■■■□□ 2.35
CBWD3-202ENST00000377342 PRR36Q9H6K5 1346 aa29.69■■■□□ 2.34
CBWD3-202ENST00000377342 SRPK2P78362 688 aaKnown RBP29.69■■■□□ 2.34
CBWD3-202ENST00000377342 ANKARQ7Z5J8 1434 aa29.68■■■□□ 2.34
CBWD3-202ENST00000377342 MST1RQ04912 1400 aa29.67■■■□□ 2.34
CBWD3-202ENST00000377342 CDCA8Q53HL2 280 aa29.66■■■□□ 2.34
CBWD3-202ENST00000377342 PUS7Q96PZ0 661 aaKnown RBP29.66■■■□□ 2.34
CBWD3-202ENST00000377342 ATAD2Q6PL18 1390 aa29.66■■■□□ 2.34
CBWD3-202ENST00000377342 NUTM2FA1L443 756 aa29.63■■■□□ 2.33
CBWD3-202ENST00000377342 POLR3GLQ9BT43 218 aa29.63■■■□□ 2.33
CBWD3-202ENST00000377342 IQSEC2Q5JU85 1478 aa29.62■■■□□ 2.33
CBWD3-202ENST00000377342 NUDT16Q96DE0 195 aaKnown RBP29.61■■■□□ 2.33
CBWD3-202ENST00000377342 C1orf167Q5SNV9 1468 aa29.61■■■□□ 2.33
CBWD3-202ENST00000377342 PPIP5K1Q6PFW1 1433 aa29.6■■■□□ 2.33
CBWD3-202ENST00000377342 ATF3P18847 181 aa29.6■■■□□ 2.33
CBWD3-202ENST00000377342 CADPS2Q86UW7 1296 aa29.59■■■□□ 2.33
CBWD3-202ENST00000377342 AKAP12Q02952 1782 aa29.59■■■□□ 2.33
CBWD3-202ENST00000377342 CD163L1Q9NR16 1453 aa29.58■■■□□ 2.33
CBWD3-202ENST00000377342 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
CBWD3-202ENST00000377342 NINLQ9Y2I6 1382 aa29.56■■■□□ 2.32
CBWD3-202ENST00000377342 CCDC61Q9Y6R9 512 aa29.55■■■□□ 2.32
CBWD3-202ENST00000377342 MON2Q7Z3U7 1717 aa29.54■■■□□ 2.32
CBWD3-202ENST00000377342 SLC12A5Q9H2X9 1139 aa29.52■■■□□ 2.32
CBWD3-202ENST00000377342 CABP1Q9NZU7 370 aa29.51■■■□□ 2.31
CBWD3-202ENST00000377342 CERKQ8TCT0 537 aa29.5■■■□□ 2.31
CBWD3-202ENST00000377342 TMC1Q8TDI8 760 aa29.5■■■□□ 2.31
CBWD3-202ENST00000377342 NRKQ7Z2Y5 1582 aa29.5■■■□□ 2.31
CBWD3-202ENST00000377342 CPSF1Q10570 1443 aaKnown RBP29.48■■■□□ 2.31
CBWD3-202ENST00000377342 A0A1W2PP64 1363 aa29.48■■■□□ 2.31
CBWD3-202ENST00000377342 ANKRD36BQ8N2N9 1353 aa29.48■■■□□ 2.31
CBWD3-202ENST00000377342 ORAI2Q96SN7 254 aa29.48■■■□□ 2.31
CBWD3-202ENST00000377342 POLR3AO14802 1390 aaPredicted RBP29.48■■■□□ 2.31
CBWD3-202ENST00000377342 PLEKHG3A1L390 1219 aa29.47■■■□□ 2.31
CBWD3-202ENST00000377342 ROBO1Q9Y6N7 1651 aa29.47■■■□□ 2.31
CBWD3-202ENST00000377342 DDX10Q13206 875 aaKnown RBP29.46■■■□□ 2.31
CBWD3-202ENST00000377342 SLAIN2Q9P270 581 aa29.46■■■□□ 2.31
CBWD3-202ENST00000377342 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
CBWD3-202ENST00000377342 PMFBP1Q8TBY8 1022 aa29.44■■■□□ 2.3
CBWD3-202ENST00000377342 PHF8Q9UPP1 1060 aa29.44■■■□□ 2.3
CBWD3-202ENST00000377342 NHSL1Q5SYE7 1610 aa29.44■■■□□ 2.3
CBWD3-202ENST00000377342 ACEP12821 1306 aa29.42■■■□□ 2.3
CBWD3-202ENST00000377342 PANK3Q9H999 370 aa29.42■■■□□ 2.3
CBWD3-202ENST00000377342 BRINP3Q76B58 766 aa29.41■■■□□ 2.3
CBWD3-202ENST00000377342 TRPM3Q9HCF6 1732 aaPredicted RBP29.4■■■□□ 2.3
CBWD3-202ENST00000377342 USP6P35125 1406 aa29.39■■■□□ 2.3
CBWD3-202ENST00000377342 CARD14Q9BXL6 1004 aa29.38■■■□□ 2.29
CBWD3-202ENST00000377342 NSD3Q9BZ95 1437 aa29.37■■■□□ 2.29
CBWD3-202ENST00000377342 TERF2IPQ9NYB0 399 aa29.37■■■□□ 2.29
CBWD3-202ENST00000377342 KTN1Q86UP2 1357 aaKnown RBP29.37■■■□□ 2.29
CBWD3-202ENST00000377342 SSH2Q76I76 1423 aa29.36■■■□□ 2.29
CBWD3-202ENST00000377342 KIF20BQ96Q89 1820 aa29.36■■■□□ 2.29
CBWD3-202ENST00000377342 PXDNQ92626 1479 aa29.35■■■□□ 2.29
CBWD3-202ENST00000377342 HDGFL2Q7Z4V5 671 aaPredicted RBP29.35■■■□□ 2.29
CBWD3-202ENST00000377342 NGDNQ8NEJ9 315 aaKnown RBP29.35■■■□□ 2.29
CBWD3-202ENST00000377342 TOM1O60784 492 aa29.34■■■□□ 2.29
CBWD3-202ENST00000377342 EDC4Q6P2E9 1401 aaKnown RBP29.34■■■□□ 2.29
CBWD3-202ENST00000377342 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
CBWD3-202ENST00000377342 PER1O15534 1290 aaPredicted RBP29.34■■■□□ 2.29
CBWD3-202ENST00000377342 UBAP1LF5GYI3 381 aa29.33■■■□□ 2.29
CBWD3-202ENST00000377342 FOXO3O43524 673 aa29.32■■■□□ 2.28
CBWD3-202ENST00000377342 DDX17Q92841 729 aaKnown RBP29.31■■■□□ 2.28
CBWD3-202ENST00000377342 PIK3C2AO00443 1686 aa29.31■■■□□ 2.28
CBWD3-202ENST00000377342 ANKRD26Q9UPS8 1709 aa29.3■■■□□ 2.28
CBWD3-202ENST00000377342 ALS2Q96Q42 1657 aa29.3■■■□□ 2.28
CBWD3-202ENST00000377342 ZNF692Q9BU19 519 aaPredicted RBP29.3■■■□□ 2.28
CBWD3-202ENST00000377342 MARF1Q9Y4F3 1742 aaKnown RBP29.28■■■□□ 2.28
CBWD3-202ENST00000377342 NPHP3Q7Z494 1330 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms