RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 U2AF1Q01081 240 aaKnown RBP eCLIP21.05■□□□□ 0.961e-10■■■■□ 24.2
TRIM27-202ENST00000377199 TNNQ9UQP3 1299 aa21.04■□□□□ 0.96
TRIM27-202ENST00000377199 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
TRIM27-202ENST00000377199 SRPK2P78362 688 aaKnown RBP21.03■□□□□ 0.96
TRIM27-202ENST00000377199 FAM161AQ3B820 660 aa21.03■□□□□ 0.96
TRIM27-202ENST00000377199 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.96
TRIM27-202ENST00000377199 C8orf34Q49A92 452 aa21.02■□□□□ 0.96
TRIM27-202ENST00000377199 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
TRIM27-202ENST00000377199 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
TRIM27-202ENST00000377199 RUNDC1Q96C34 613 aa21.01■□□□□ 0.95
TRIM27-202ENST00000377199 CFAP53Q96M91 514 aa21■□□□□ 0.95
TRIM27-202ENST00000377199 GGNBP2Q9H3C7 697 aa21■□□□□ 0.95
TRIM27-202ENST00000377199 POLR3AO14802 1390 aaPredicted RBP21■□□□□ 0.95
TRIM27-202ENST00000377199 POGZQ7Z3K3 1410 aa21■□□□□ 0.95
TRIM27-202ENST00000377199 IDI1Q13907 227 aa21■□□□□ 0.95
TRIM27-202ENST00000377199 DDRGK1Q96HY6 314 aa20.99■□□□□ 0.95
TRIM27-202ENST00000377199 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
TRIM27-202ENST00000377199 EVC2Q86UK5 1308 aa20.99■□□□□ 0.95
TRIM27-202ENST00000377199 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
TRIM27-202ENST00000377199 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
TRIM27-202ENST00000377199 NRXN1Q9ULB1 1477 aa20.96■□□□□ 0.95
TRIM27-202ENST00000377199 SBNO2Q9Y2G9 1366 aa20.96■□□□□ 0.95
TRIM27-202ENST00000377199 RLBP1P12271 317 aa20.95■□□□□ 0.94
TRIM27-202ENST00000377199 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
TRIM27-202ENST00000377199 FRMPD1Q5SYB0 1578 aa20.95■□□□□ 0.94
TRIM27-202ENST00000377199 RARSP54136 660 aaKnown RBP20.94■□□□□ 0.94
TRIM27-202ENST00000377199 IFT172Q9UG01 1749 aa20.94■□□□□ 0.94
TRIM27-202ENST00000377199 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
TRIM27-202ENST00000377199 POGKQ9P215 609 aa20.93■□□□□ 0.94
TRIM27-202ENST00000377199 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
TRIM27-202ENST00000377199 LMTK2Q8IWU2 1503 aa20.91■□□□□ 0.94
TRIM27-202ENST00000377199 PDE3AQ14432 1141 aa20.91■□□□□ 0.94
TRIM27-202ENST00000377199 STAG3Q9UJ98 1225 aa20.91■□□□□ 0.94
TRIM27-202ENST00000377199 ADGRB1O14514 1584 aa20.91■□□□□ 0.94
TRIM27-202ENST00000377199 FBXO31Q5XUX0 539 aaPredicted RBP20.91■□□□□ 0.94
TRIM27-202ENST00000377199 RPGRIP1LQ68CZ1 1315 aa20.91■□□□□ 0.94
TRIM27-202ENST00000377199 PRAM1Q96QH2 718 aa20.91■□□□□ 0.94
TRIM27-202ENST00000377199 ABCC3O15438 1527 aa20.9■□□□□ 0.94
TRIM27-202ENST00000377199 NEURL4Q96JN8 1562 aa20.9■□□□□ 0.94
TRIM27-202ENST00000377199 FBLN1P23142 703 aa20.89■□□□□ 0.94
TRIM27-202ENST00000377199 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.93
TRIM27-202ENST00000377199 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
TRIM27-202ENST00000377199 SEC24BO95487 1268 aa20.88■□□□□ 0.93
TRIM27-202ENST00000377199 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
TRIM27-202ENST00000377199 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
TRIM27-202ENST00000377199 PPLO60437 1756 aa20.88■□□□□ 0.93
TRIM27-202ENST00000377199 SETBP1Q9Y6X0 1596 aa20.87■□□□□ 0.93
TRIM27-202ENST00000377199 MYO3AQ8NEV4 1616 aa20.87■□□□□ 0.93
TRIM27-202ENST00000377199 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
TRIM27-202ENST00000377199 ANKRD36BQ8N2N9 1353 aa20.86■□□□□ 0.93
TRIM27-202ENST00000377199 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
TRIM27-202ENST00000377199 GLI2P10070 1586 aa20.86■□□□□ 0.93
TRIM27-202ENST00000377199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
TRIM27-202ENST00000377199 NFKBIBQ15653 356 aa20.85■□□□□ 0.93
TRIM27-202ENST00000377199 YEATS2Q9ULM3 1422 aa20.85■□□□□ 0.93
TRIM27-202ENST00000377199 MLECQ14165 292 aa20.85■□□□□ 0.93
TRIM27-202ENST00000377199 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
TRIM27-202ENST00000377199 WDR63Q8IWG1 891 aa20.85■□□□□ 0.93
TRIM27-202ENST00000377199 MYH16Q9H6N6 1097 aa20.85■□□□□ 0.93
TRIM27-202ENST00000377199 TULP4Q9NRJ4 1543 aa20.84■□□□□ 0.93
TRIM27-202ENST00000377199 MAPK8IP3Q9UPT6 1336 aa20.84■□□□□ 0.93
TRIM27-202ENST00000377199 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
TRIM27-202ENST00000377199 SHPRHQ149N8 1683 aa20.83■□□□□ 0.93
TRIM27-202ENST00000377199 EXOSC9Q06265 439 aaKnown RBP20.83■□□□□ 0.92
TRIM27-202ENST00000377199 SIGLEC1Q9BZZ2 1709 aa20.83■□□□□ 0.92
TRIM27-202ENST00000377199 CABP1Q9NZU7 370 aa20.81■□□□□ 0.92
TRIM27-202ENST00000377199 FYB1O15117 783 aa20.8■□□□□ 0.92
TRIM27-202ENST00000377199 RTN4Q9NQC3 1192 aaKnown RBP20.8■□□□□ 0.92
TRIM27-202ENST00000377199 CAMSAP1Q5T5Y3 1602 aa20.8■□□□□ 0.92
TRIM27-202ENST00000377199 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
TRIM27-202ENST00000377199 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
TRIM27-202ENST00000377199 TERF2IPQ9NYB0 399 aa20.79■□□□□ 0.92
TRIM27-202ENST00000377199 WAPLQ7Z5K2 1190 aa20.79■□□□□ 0.92
TRIM27-202ENST00000377199 SLC52A1Q9NWF4 448 aa20.79■□□□□ 0.92
TRIM27-202ENST00000377199 USP35Q9P2H5 1018 aa20.79■□□□□ 0.92
TRIM27-202ENST00000377199 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
TRIM27-202ENST00000377199 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
TRIM27-202ENST00000377199 TMPOP42166 694 aaKnown RBP20.78■□□□□ 0.92
TRIM27-202ENST00000377199 RIPK4P57078 832 aa20.78■□□□□ 0.92
TRIM27-202ENST00000377199 ITPRIPQ8IWB1 547 aa20.78■□□□□ 0.92
TRIM27-202ENST00000377199 PMFBP1Q8TBY8 1022 aa20.78■□□□□ 0.92
TRIM27-202ENST00000377199 ZC3H13Q5T200 1668 aaKnown RBP20.78■□□□□ 0.92
TRIM27-202ENST00000377199 CDK19Q9BWU1 502 aa20.78■□□□□ 0.92
TRIM27-202ENST00000377199 ZKSCAN2Q63HK3 967 aa20.77■□□□□ 0.92
TRIM27-202ENST00000377199 SLKQ9H2G2 1235 aaPredicted RBP20.77■□□□□ 0.92
TRIM27-202ENST00000377199 FRAT2O75474 233 aaPredicted RBP20.77■□□□□ 0.92
TRIM27-202ENST00000377199 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
TRIM27-202ENST00000377199 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
TRIM27-202ENST00000377199 CFAP74Q9C0B2 1584 aa20.75■□□□□ 0.91
TRIM27-202ENST00000377199 NINLQ9Y2I6 1382 aa20.75■□□□□ 0.91
TRIM27-202ENST00000377199 CCDC27Q2M243 656 aa20.75■□□□□ 0.91
TRIM27-202ENST00000377199 SSH1Q8WYL5 1049 aa20.75■□□□□ 0.91
TRIM27-202ENST00000377199 MVPQ14764 893 aaKnown RBP20.75■□□□□ 0.91
TRIM27-202ENST00000377199 HDGFL2Q7Z4V5 671 aaPredicted RBP20.75■□□□□ 0.91
TRIM27-202ENST00000377199 ARHGEF28Q8N1W1 1705 aaKnown RBP20.75■□□□□ 0.91
TRIM27-202ENST00000377199 RWDD1Q9H446 243 aaPredicted RBP20.74■□□□□ 0.91
TRIM27-202ENST00000377199 TRIM35Q9UPQ4 493 aa20.74■□□□□ 0.91
TRIM27-202ENST00000377199 HMOX1P09601 288 aa20.74■□□□□ 0.91
TRIM27-202ENST00000377199 SPRYD3Q8NCJ5 442 aa20.74■□□□□ 0.91
TRIM27-202ENST00000377199 DIP2CQ9Y2E4 1556 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms