RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 GPRASP1Q5JY77 1395 aa17.58■□□□□ 0.41
DDR1-225ENST00000376568 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
DDR1-225ENST00000376568 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
DDR1-225ENST00000376568 RIPK4P57078 832 aa17.57■□□□□ 0.4
DDR1-225ENST00000376568 ACEP12821 1306 aa17.57■□□□□ 0.4
DDR1-225ENST00000376568 ZFYVE16Q7Z3T8 1539 aa17.56■□□□□ 0.4
DDR1-225ENST00000376568 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
DDR1-225ENST00000376568 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
DDR1-225ENST00000376568 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
DDR1-225ENST00000376568 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
DDR1-225ENST00000376568 RGS3P49796 1198 aa17.54■□□□□ 0.4
DDR1-225ENST00000376568 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
DDR1-225ENST00000376568 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.54■□□□□ 0.4
DDR1-225ENST00000376568 TESK2Q96S53 571 aa17.54■□□□□ 0.4
DDR1-225ENST00000376568 ABCC1P33527 1531 aa17.54■□□□□ 0.4
DDR1-225ENST00000376568 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
DDR1-225ENST00000376568 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
DDR1-225ENST00000376568 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
DDR1-225ENST00000376568 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
DDR1-225ENST00000376568 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
DDR1-225ENST00000376568 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
DDR1-225ENST00000376568 GOLGA2Q08379 1002 aa17.52■□□□□ 0.39
DDR1-225ENST00000376568 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.39
DDR1-225ENST00000376568 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.39
DDR1-225ENST00000376568 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
DDR1-225ENST00000376568 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
DDR1-225ENST00000376568 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
DDR1-225ENST00000376568 TSR2Q969E8 191 aaKnown RBP17.49■□□□□ 0.39
DDR1-225ENST00000376568 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
DDR1-225ENST00000376568 TEFQ10587 303 aa17.49■□□□□ 0.39
DDR1-225ENST00000376568 CARD14Q9BXL6 1004 aa17.49■□□□□ 0.39
DDR1-225ENST00000376568 ADGRL2O95490 1459 aa17.49■□□□□ 0.39
DDR1-225ENST00000376568 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
DDR1-225ENST00000376568 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
DDR1-225ENST00000376568 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
DDR1-225ENST00000376568 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
DDR1-225ENST00000376568 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
DDR1-225ENST00000376568 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
DDR1-225ENST00000376568 METP08581 1390 aa17.46■□□□□ 0.39
DDR1-225ENST00000376568 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
DDR1-225ENST00000376568 PREX2Q70Z35 1606 aa17.46■□□□□ 0.39
DDR1-225ENST00000376568 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
DDR1-225ENST00000376568 FYB1O15117 783 aa17.45■□□□□ 0.38
DDR1-225ENST00000376568 MSH5O43196 834 aa17.44■□□□□ 0.38
DDR1-225ENST00000376568 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
DDR1-225ENST00000376568 TMEM2Q9UHN6 1383 aa17.44■□□□□ 0.38
DDR1-225ENST00000376568 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
DDR1-225ENST00000376568 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
DDR1-225ENST00000376568 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
DDR1-225ENST00000376568 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
DDR1-225ENST00000376568 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
DDR1-225ENST00000376568 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
DDR1-225ENST00000376568 AIMP1Q12904 312 aaKnown RBP17.42■□□□□ 0.38
DDR1-225ENST00000376568 TBX22Q9Y458 520 aa17.42■□□□□ 0.38
DDR1-225ENST00000376568 LRRC59Q96AG4 307 aaKnown RBP17.42■□□□□ 0.38
DDR1-225ENST00000376568 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
DDR1-225ENST00000376568 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
DDR1-225ENST00000376568 MCM10Q7L590 875 aa17.41■□□□□ 0.38
DDR1-225ENST00000376568 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
DDR1-225ENST00000376568 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
DDR1-225ENST00000376568 C19orf44Q9H6X5 657 aa17.41■□□□□ 0.38
DDR1-225ENST00000376568 SHROOM2Q13796 1616 aa17.41■□□□□ 0.38
DDR1-225ENST00000376568 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
DDR1-225ENST00000376568 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
DDR1-225ENST00000376568 FAM83GA6ND36 823 aa17.39■□□□□ 0.37
DDR1-225ENST00000376568 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
DDR1-225ENST00000376568 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
DDR1-225ENST00000376568 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
DDR1-225ENST00000376568 C8orf37Q96NL8 207 aa17.38■□□□□ 0.37
DDR1-225ENST00000376568 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
DDR1-225ENST00000376568 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
DDR1-225ENST00000376568 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
DDR1-225ENST00000376568 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
DDR1-225ENST00000376568 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
DDR1-225ENST00000376568 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
DDR1-225ENST00000376568 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
DDR1-225ENST00000376568 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
DDR1-225ENST00000376568 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
DDR1-225ENST00000376568 MSH6P52701 1360 aa17.36■□□□□ 0.37
DDR1-225ENST00000376568 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
DDR1-225ENST00000376568 ARHGEF5Q12774 1597 aa17.36■□□□□ 0.37
DDR1-225ENST00000376568 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
DDR1-225ENST00000376568 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
DDR1-225ENST00000376568 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
DDR1-225ENST00000376568 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
DDR1-225ENST00000376568 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
DDR1-225ENST00000376568 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
DDR1-225ENST00000376568 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
DDR1-225ENST00000376568 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
DDR1-225ENST00000376568 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
DDR1-225ENST00000376568 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
DDR1-225ENST00000376568 TOM1O60784 492 aa17.31■□□□□ 0.36
DDR1-225ENST00000376568 EXOC6Q8TAG9 804 aa17.31■□□□□ 0.36
DDR1-225ENST00000376568 BCAR3O75815 825 aa17.3■□□□□ 0.36
DDR1-225ENST00000376568 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
DDR1-225ENST00000376568 PANK1Q8TE04 598 aa17.3■□□□□ 0.36
DDR1-225ENST00000376568 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
DDR1-225ENST00000376568 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
DDR1-225ENST00000376568 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
DDR1-225ENST00000376568 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms