RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 TTC37Q6PGP7 1564 aa14.69□□□□□ -0.06
TM9SF2-201ENST00000376387 RSPH4AQ5TD94 716 aa14.68□□□□□ -0.06
TM9SF2-201ENST00000376387 PRDM10Q9NQV6 1147 aa14.68□□□□□ -0.06
TM9SF2-201ENST00000376387 PDZRN3Q9UPQ7 1066 aa14.68□□□□□ -0.06
TM9SF2-201ENST00000376387 ATP10AO60312 1499 aa14.68□□□□□ -0.06
TM9SF2-201ENST00000376387 IGSF3O75054 1194 aa14.67□□□□□ -0.06
TM9SF2-201ENST00000376387 SCAF11Q99590 1463 aaKnown RBP14.67□□□□□ -0.06
TM9SF2-201ENST00000376387 L1TD1Q5T7N2 865 aaKnown RBP14.66□□□□□ -0.06
TM9SF2-201ENST00000376387 MAST1Q9Y2H9 1570 aa14.66□□□□□ -0.06
TM9SF2-201ENST00000376387 CDCA8Q53HL2 280 aa14.66□□□□□ -0.06
TM9SF2-201ENST00000376387 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
TM9SF2-201ENST00000376387 RARSP54136 660 aaKnown RBP14.65□□□□□ -0.06
TM9SF2-201ENST00000376387 NPC1L1Q9UHC9 1359 aa14.64□□□□□ -0.07
TM9SF2-201ENST00000376387 UHRF1BP1LA0JNW5 1464 aa14.64□□□□□ -0.07
TM9SF2-201ENST00000376387 CEP152O94986 1710 aa14.64□□□□□ -0.07
TM9SF2-201ENST00000376387 PLXNC1O60486 1568 aa14.63□□□□□ -0.07
TM9SF2-201ENST00000376387 MCM4P33991 863 aa14.63□□□□□ -0.07
TM9SF2-201ENST00000376387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.073e-12■■■■■ 42.9
TM9SF2-201ENST00000376387 FSD2A1L4K1 749 aa14.63□□□□□ -0.07
TM9SF2-201ENST00000376387 GOLGA6L3A6NEY3 463 aa14.63□□□□□ -0.07
TM9SF2-201ENST00000376387 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
TM9SF2-201ENST00000376387 KDM5AP29375 1690 aaKnown RBP14.62□□□□□ -0.07
TM9SF2-201ENST00000376387 SPHKAPQ2M3C7 1700 aa14.62□□□□□ -0.07
TM9SF2-201ENST00000376387 DUOX2Q9NRD8 1548 aa14.62□□□□□ -0.07
TM9SF2-201ENST00000376387 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
TM9SF2-201ENST00000376387 CFAP70Q5T0N1 1121 aa14.61□□□□□ -0.07
TM9SF2-201ENST00000376387 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
TM9SF2-201ENST00000376387 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
TM9SF2-201ENST00000376387 ERVK-7P63135 1459 aa14.6□□□□□ -0.07
TM9SF2-201ENST00000376387 NINLQ9Y2I6 1382 aa14.6□□□□□ -0.07
TM9SF2-201ENST00000376387 CLTCL1P53675 1640 aa14.6□□□□□ -0.07
TM9SF2-201ENST00000376387 MFAP1P55081 439 aaKnown RBP14.59□□□□□ -0.07
TM9SF2-201ENST00000376387 TCP11L2Q8N4U5 519 aa14.59□□□□□ -0.07
TM9SF2-201ENST00000376387 SCAPERQ9BY12 1400 aa14.59□□□□□ -0.07
TM9SF2-201ENST00000376387 RTEL1-TNFRSF6BF6WH68 1400 aa14.59□□□□□ -0.07
TM9SF2-201ENST00000376387 SHPRHQ149N8 1683 aa14.58□□□□□ -0.07
TM9SF2-201ENST00000376387 TRAK2O60296 914 aa14.58□□□□□ -0.08
TM9SF2-201ENST00000376387 BBXQ8WY36 941 aaPredicted RBP14.58□□□□□ -0.08
TM9SF2-201ENST00000376387 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
TM9SF2-201ENST00000376387 POLR3AO14802 1390 aaPredicted RBP14.56□□□□□ -0.08
TM9SF2-201ENST00000376387 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
TM9SF2-201ENST00000376387 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
TM9SF2-201ENST00000376387 RUNDC1Q96C34 613 aa14.56□□□□□ -0.08
TM9SF2-201ENST00000376387 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
TM9SF2-201ENST00000376387 TRPM2O94759 1503 aa14.55□□□□□ -0.08
TM9SF2-201ENST00000376387 ADGRF5Q8IZF2 1346 aa14.55□□□□□ -0.08
TM9SF2-201ENST00000376387 TRAPPC8Q9Y2L5 1435 aa14.55□□□□□ -0.08
TM9SF2-201ENST00000376387 CLCN1P35523 988 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 CNPY4Q8N129 248 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 IQSEC2Q5JU85 1478 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 ERBB4Q15303 1308 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 MORC1Q86VD1 984 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 NGEFQ8N5V2 710 aa14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
TM9SF2-201ENST00000376387 MVPQ14764 893 aaKnown RBP14.53□□□□□ -0.08
TM9SF2-201ENST00000376387 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
TM9SF2-201ENST00000376387 UGGT1Q9NYU2 1555 aa14.53□□□□□ -0.08
TM9SF2-201ENST00000376387 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
TM9SF2-201ENST00000376387 NSD3Q9BZ95 1437 aa14.53□□□□□ -0.08
TM9SF2-201ENST00000376387 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.08
TM9SF2-201ENST00000376387 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.08
TM9SF2-201ENST00000376387 AFAP1Q8N556 730 aa14.51□□□□□ -0.09
TM9SF2-201ENST00000376387 PTPRTO14522 1441 aa14.51□□□□□ -0.09
TM9SF2-201ENST00000376387 GRPEL1Q9HAV7 217 aa14.51□□□□□ -0.09
TM9SF2-201ENST00000376387 ABCA6Q8N139 1617 aa14.51□□□□□ -0.09
TM9SF2-201ENST00000376387 MTHFSP49914 203 aa14.51□□□□□ -0.09
TM9SF2-201ENST00000376387 WDR63Q8IWG1 891 aa14.5□□□□□ -0.09
TM9SF2-201ENST00000376387 ZMYM3Q14202 1370 aa14.5□□□□□ -0.09
TM9SF2-201ENST00000376387 MRE11P49959 708 aa14.5□□□□□ -0.09
TM9SF2-201ENST00000376387 GAS2L3Q86XJ1 694 aa14.5□□□□□ -0.09
TM9SF2-201ENST00000376387 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
TM9SF2-201ENST00000376387 DZIP1LQ8IYY4 767 aaKnown RBP14.49□□□□□ -0.09
TM9SF2-201ENST00000376387 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
TM9SF2-201ENST00000376387 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
TM9SF2-201ENST00000376387 HSCBQ8IWL3 235 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 KIAA1210Q9ULL0 1709 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 TRIM27P14373 513 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 DDIT3P35638 169 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 SECISBP2LQ93073 1101 aaKnown RBP14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 MYH16Q9H6N6 1097 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 HSP90AA1P07900 732 aaKnown RBP14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 TNPO1Q92973 898 aaKnown RBP14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 TRAK1Q9UPV9 953 aa14.47□□□□□ -0.09
TM9SF2-201ENST00000376387 MAP3K4Q9Y6R4 1608 aa14.46□□□□□ -0.09
TM9SF2-201ENST00000376387 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
TM9SF2-201ENST00000376387 SPAG9O60271 1321 aaKnown RBP14.46□□□□□ -0.09
TM9SF2-201ENST00000376387 ESPNB1AK53 854 aa14.46□□□□□ -0.09
TM9SF2-201ENST00000376387 EXOSC9Q06265 439 aaKnown RBP14.46□□□□□ -0.09
TM9SF2-201ENST00000376387 HSP90AA2PQ14568 343 aaPredicted RBP14.46□□□□□ -0.1
TM9SF2-201ENST00000376387 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.1
TM9SF2-201ENST00000376387 PLCH2O75038 1416 aa14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 U2AF1L5P0DN76 240 aaPredicted RBP14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 U2AF1Q01081 240 aaKnown RBP eCLIP14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 TMEM132AQ24JP5 1023 aa14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 EFCAB2Q5VUJ9 269 aa14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 ABCC1P33527 1531 aa14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 ZNF518AQ6AHZ1 1483 aa14.45□□□□□ -0.1
TM9SF2-201ENST00000376387 SSH1Q8WYL5 1049 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms