RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
SDHD-201ENST00000375549 TECPR2O15040 1411 aa17.12■□□□□ 0.33
SDHD-201ENST00000375549 ROBO2Q9HCK4 1378 aa17.11■□□□□ 0.33
SDHD-201ENST00000375549 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
SDHD-201ENST00000375549 KIF7Q2M1P5 1343 aa17.11■□□□□ 0.33
SDHD-201ENST00000375549 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
SDHD-201ENST00000375549 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
SDHD-201ENST00000375549 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
SDHD-201ENST00000375549 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
SDHD-201ENST00000375549 KCNA6P17658 529 aa17.1■□□□□ 0.33
SDHD-201ENST00000375549 CPS1P31327 1500 aa17.09■□□□□ 0.33
SDHD-201ENST00000375549 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
SDHD-201ENST00000375549 SBNO2Q9Y2G9 1366 aa17.09■□□□□ 0.33
SDHD-201ENST00000375549 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
SDHD-201ENST00000375549 KNDC1Q76NI1 1749 aa17.09■□□□□ 0.33
SDHD-201ENST00000375549 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
SDHD-201ENST00000375549 PTCH1Q13635 1447 aa17.07■□□□□ 0.32
SDHD-201ENST00000375549 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
SDHD-201ENST00000375549 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
SDHD-201ENST00000375549 XRN1Q8IZH2 1706 aaKnown RBP17.06■□□□□ 0.32
SDHD-201ENST00000375549 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
SDHD-201ENST00000375549 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
SDHD-201ENST00000375549 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.31
SDHD-201ENST00000375549 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.31
SDHD-201ENST00000375549 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
SDHD-201ENST00000375549 TULP4Q9NRJ4 1543 aa17.01■□□□□ 0.31
SDHD-201ENST00000375549 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
SDHD-201ENST00000375549 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
SDHD-201ENST00000375549 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
SDHD-201ENST00000375549 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
SDHD-201ENST00000375549 WASLO00401 505 aaPredicted RBP17■□□□□ 0.31
SDHD-201ENST00000375549 ZNF335Q9H4Z2 1342 aaPredicted RBP16.99■□□□□ 0.31
SDHD-201ENST00000375549 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
SDHD-201ENST00000375549 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
SDHD-201ENST00000375549 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
SDHD-201ENST00000375549 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
SDHD-201ENST00000375549 TMC1Q8TDI8 760 aa16.96■□□□□ 0.3
SDHD-201ENST00000375549 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
SDHD-201ENST00000375549 NUTM2FA1L443 756 aa16.94■□□□□ 0.3
SDHD-201ENST00000375549 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
SDHD-201ENST00000375549 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
SDHD-201ENST00000375549 STRCP1A6NGW2 1772 aa16.93■□□□□ 0.3
SDHD-201ENST00000375549 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
SDHD-201ENST00000375549 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
SDHD-201ENST00000375549 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
SDHD-201ENST00000375549 PANK3Q9H999 370 aa16.92■□□□□ 0.3
SDHD-201ENST00000375549 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
SDHD-201ENST00000375549 PRR36Q9H6K5 1346 aa16.89■□□□□ 0.29
SDHD-201ENST00000375549 NCOA3Q9Y6Q9 1424 aa16.89■□□□□ 0.29
SDHD-201ENST00000375549 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
SDHD-201ENST00000375549 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
SDHD-201ENST00000375549 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
SDHD-201ENST00000375549 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
SDHD-201ENST00000375549 MYOM1P52179 1685 aa16.88■□□□□ 0.29
SDHD-201ENST00000375549 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
SDHD-201ENST00000375549 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
SDHD-201ENST00000375549 ATP7BP35670 1465 aa16.87■□□□□ 0.29
SDHD-201ENST00000375549 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
SDHD-201ENST00000375549 ATF3P18847 181 aa16.86■□□□□ 0.29
SDHD-201ENST00000375549 MSH6P52701 1360 aa16.85■□□□□ 0.29
SDHD-201ENST00000375549 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
SDHD-201ENST00000375549 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
SDHD-201ENST00000375549 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
SDHD-201ENST00000375549 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
SDHD-201ENST00000375549 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
SDHD-201ENST00000375549 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.29
SDHD-201ENST00000375549 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
SDHD-201ENST00000375549 PER1O15534 1290 aaPredicted RBP16.83■□□□□ 0.28
SDHD-201ENST00000375549 ANP32CO43423 234 aa16.83■□□□□ 0.28
SDHD-201ENST00000375549 CARD14Q9BXL6 1004 aa16.83■□□□□ 0.28
SDHD-201ENST00000375549 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
SDHD-201ENST00000375549 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
SDHD-201ENST00000375549 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
SDHD-201ENST00000375549 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
SDHD-201ENST00000375549 DCCP43146 1447 aa16.81■□□□□ 0.28
SDHD-201ENST00000375549 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
SDHD-201ENST00000375549 NSD3Q9BZ95 1437 aa16.8■□□□□ 0.28
SDHD-201ENST00000375549 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
SDHD-201ENST00000375549 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
SDHD-201ENST00000375549 MIER1Q8N108 512 aa16.8■□□□□ 0.28
SDHD-201ENST00000375549 ACEP12821 1306 aa16.8■□□□□ 0.28
SDHD-201ENST00000375549 KCNA4P22459 653 aa16.79■□□□□ 0.28
SDHD-201ENST00000375549 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
SDHD-201ENST00000375549 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
SDHD-201ENST00000375549 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
SDHD-201ENST00000375549 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
SDHD-201ENST00000375549 XIRP1Q702N8 1843 aaKnown RBP16.78■□□□□ 0.28
SDHD-201ENST00000375549 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
SDHD-201ENST00000375549 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
SDHD-201ENST00000375549 ORAI2Q96SN7 254 aa16.78■□□□□ 0.28
SDHD-201ENST00000375549 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
SDHD-201ENST00000375549 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
SDHD-201ENST00000375549 MST1RQ04912 1400 aa16.77■□□□□ 0.28
SDHD-201ENST00000375549 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.28
SDHD-201ENST00000375549 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
SDHD-201ENST00000375549 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
SDHD-201ENST00000375549 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
SDHD-201ENST00000375549 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
SDHD-201ENST00000375549 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
SDHD-201ENST00000375549 POLR3AO14802 1390 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms