RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
APOA1-205ENST00000375329 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
APOA1-205ENST00000375329 COL16A1Q07092 1604 aaPredicted RBP22.27■■□□□ 1.16
APOA1-205ENST00000375329 POGKQ9P215 609 aa22.26■■□□□ 1.15
APOA1-205ENST00000375329 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
APOA1-205ENST00000375329 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
APOA1-205ENST00000375329 LRRC59Q96AG4 307 aaKnown RBP22.23■■□□□ 1.15
APOA1-205ENST00000375329 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
APOA1-205ENST00000375329 NHSL1Q5SYE7 1610 aa22.23■■□□□ 1.15
APOA1-205ENST00000375329 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
APOA1-205ENST00000375329 SPATA31A6Q5VVP1 1343 aa22.22■■□□□ 1.15
APOA1-205ENST00000375329 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
APOA1-205ENST00000375329 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
APOA1-205ENST00000375329 ESCO1Q5FWF5 840 aa22.2■■□□□ 1.14
APOA1-205ENST00000375329 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
APOA1-205ENST00000375329 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
APOA1-205ENST00000375329 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
APOA1-205ENST00000375329 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
APOA1-205ENST00000375329 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
APOA1-205ENST00000375329 SAFB2Q14151 953 aaKnown RBP eCLIP22.17■■□□□ 1.14
APOA1-205ENST00000375329 L3MBTL2Q969R5 705 aa22.16■■□□□ 1.14
APOA1-205ENST00000375329 FMN2Q9NZ56 1722 aa22.16■■□□□ 1.14
APOA1-205ENST00000375329 SOS2Q07890 1332 aaPredicted RBP22.14■■□□□ 1.14
APOA1-205ENST00000375329 NUTM2FA1L443 756 aa22.14■■□□□ 1.13
APOA1-205ENST00000375329 EIF3AQ14152 1382 aaKnown RBP22.13■■□□□ 1.13
APOA1-205ENST00000375329 DDX17Q92841 729 aaKnown RBP22.13■■□□□ 1.13
APOA1-205ENST00000375329 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
APOA1-205ENST00000375329 ADGRB2O60241 1585 aa22.11■■□□□ 1.13
APOA1-205ENST00000375329 FOXO3O43524 673 aa22.1■■□□□ 1.13
APOA1-205ENST00000375329 KIF1AQ12756 1690 aa22.1■■□□□ 1.13
APOA1-205ENST00000375329 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
APOA1-205ENST00000375329 ANKARQ7Z5J8 1434 aa22.09■■□□□ 1.13
APOA1-205ENST00000375329 ARHGEF28Q8N1W1 1705 aaKnown RBP22.09■■□□□ 1.13
APOA1-205ENST00000375329 PHF8Q9UPP1 1060 aa22.08■■□□□ 1.13
APOA1-205ENST00000375329 PNPLA6Q8IY17 1366 aa22.08■■□□□ 1.12
APOA1-205ENST00000375329 WASLO00401 505 aaPredicted RBP22.07■■□□□ 1.12
APOA1-205ENST00000375329 NBPF1Q3BBV0 1214 aa22.07■■□□□ 1.12
APOA1-205ENST00000375329 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
APOA1-205ENST00000375329 RGS17Q9UGC6 210 aaPredicted RBP22.07■■□□□ 1.12
APOA1-205ENST00000375329 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
APOA1-205ENST00000375329 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
APOA1-205ENST00000375329 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
APOA1-205ENST00000375329 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
APOA1-205ENST00000375329 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
APOA1-205ENST00000375329 PSME1Q06323 249 aa22.05■■□□□ 1.12
APOA1-205ENST00000375329 LRP6O75581 1613 aa22.03■■□□□ 1.12
APOA1-205ENST00000375329 PXDNQ92626 1479 aa22.03■■□□□ 1.12
APOA1-205ENST00000375329 ZNF772Q68DY9 489 aaPredicted RBP22.02■■□□□ 1.12
APOA1-205ENST00000375329 KRT28Q7Z3Y7 464 aa22.02■■□□□ 1.12
APOA1-205ENST00000375329 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
APOA1-205ENST00000375329 TULP4Q9NRJ4 1543 aa22.01■■□□□ 1.11
APOA1-205ENST00000375329 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
APOA1-205ENST00000375329 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
APOA1-205ENST00000375329 XPCQ01831 940 aaPredicted RBP22■■□□□ 1.11
APOA1-205ENST00000375329 POTEAQ6S8J7 498 aa22■■□□□ 1.11
APOA1-205ENST00000375329 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
APOA1-205ENST00000375329 USP32Q8NFA0 1604 aa21.98■■□□□ 1.11
APOA1-205ENST00000375329 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
APOA1-205ENST00000375329 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
APOA1-205ENST00000375329 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
APOA1-205ENST00000375329 SPATA31A3Q5VYP0 1347 aa21.97■■□□□ 1.11
APOA1-205ENST00000375329 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
APOA1-205ENST00000375329 SBNO1A3KN83 1393 aa21.96■■□□□ 1.11
APOA1-205ENST00000375329 GPRASP1Q5JY77 1395 aa21.96■■□□□ 1.11
APOA1-205ENST00000375329 NUDT16Q96DE0 195 aaKnown RBP21.95■■□□□ 1.1
APOA1-205ENST00000375329 PRR36Q9H6K5 1346 aa21.95■■□□□ 1.1
APOA1-205ENST00000375329 ADAMTS2O95450 1211 aa21.94■■□□□ 1.1
APOA1-205ENST00000375329 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
APOA1-205ENST00000375329 C8orf37Q96NL8 207 aa21.94■■□□□ 1.1
APOA1-205ENST00000375329 ARHGEF10O15013 1369 aa21.93■■□□□ 1.1
APOA1-205ENST00000375329 AFF2P51816 1311 aa21.93■■□□□ 1.1
APOA1-205ENST00000375329 TNS3Q68CZ2 1445 aa21.93■■□□□ 1.1
APOA1-205ENST00000375329 NGLY1Q96IV0 654 aa21.93■■□□□ 1.1
APOA1-205ENST00000375329 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
APOA1-205ENST00000375329 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
APOA1-205ENST00000375329 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
APOA1-205ENST00000375329 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
APOA1-205ENST00000375329 ATP7BP35670 1465 aa21.9■■□□□ 1.1
APOA1-205ENST00000375329 SRPK2P78362 688 aaKnown RBP21.9■■□□□ 1.1
APOA1-205ENST00000375329 LMOD2Q6P5Q4 547 aa21.89■■□□□ 1.09
APOA1-205ENST00000375329 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
APOA1-205ENST00000375329 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
APOA1-205ENST00000375329 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
APOA1-205ENST00000375329 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
APOA1-205ENST00000375329 PLEKHG3A1L390 1219 aa21.86■■□□□ 1.09
APOA1-205ENST00000375329 RXRBP28702 533 aa21.86■■□□□ 1.09
APOA1-205ENST00000375329 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
APOA1-205ENST00000375329 MARF1Q9Y4F3 1742 aaKnown RBP21.86■■□□□ 1.09
APOA1-205ENST00000375329 FNBP4Q8N3X1 1017 aaPredicted RBP21.84■■□□□ 1.09
APOA1-205ENST00000375329 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
APOA1-205ENST00000375329 POLR3AO14802 1390 aaPredicted RBP21.84■■□□□ 1.09
APOA1-205ENST00000375329 TRPM3Q9HCF6 1732 aaPredicted RBP21.83■■□□□ 1.09
APOA1-205ENST00000375329 TOPAZ1Q8N9V7 1692 aa21.83■■□□□ 1.09
APOA1-205ENST00000375329 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.09
APOA1-205ENST00000375329 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
APOA1-205ENST00000375329 USP21Q9UK80 565 aa21.83■■□□□ 1.09
APOA1-205ENST00000375329 ACEP12821 1306 aa21.81■■□□□ 1.08
APOA1-205ENST00000375329 TRPC5Q9UL62 973 aaPredicted RBP21.81■■□□□ 1.08
APOA1-205ENST00000375329 SBNO2Q9Y2G9 1366 aa21.81■■□□□ 1.08
APOA1-205ENST00000375329 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms