RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
CLIC4-201ENST00000374379 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
CLIC4-201ENST00000374379 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
CLIC4-201ENST00000374379 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
CLIC4-201ENST00000374379 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
CLIC4-201ENST00000374379 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
CLIC4-201ENST00000374379 LNPKQ9C0E8 428 aa17.1■□□□□ 0.33
CLIC4-201ENST00000374379 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
CLIC4-201ENST00000374379 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
CLIC4-201ENST00000374379 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLIC4-201ENST00000374379 TTC37Q6PGP7 1564 aa17.09■□□□□ 0.33
CLIC4-201ENST00000374379 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
CLIC4-201ENST00000374379 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.33
CLIC4-201ENST00000374379 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
CLIC4-201ENST00000374379 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
CLIC4-201ENST00000374379 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
CLIC4-201ENST00000374379 LMOD3Q0VAK6 560 aa17.07■□□□□ 0.32
CLIC4-201ENST00000374379 NME9Q86XW9 330 aa17.07■□□□□ 0.32
CLIC4-201ENST00000374379 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
CLIC4-201ENST00000374379 GZF1Q9H116 711 aaPredicted RBP17.07■□□□□ 0.32
CLIC4-201ENST00000374379 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
CLIC4-201ENST00000374379 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
CLIC4-201ENST00000374379 ADGBQ8N7X0 1667 aa17.07■□□□□ 0.32
CLIC4-201ENST00000374379 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
CLIC4-201ENST00000374379 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
CLIC4-201ENST00000374379 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
CLIC4-201ENST00000374379 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
CLIC4-201ENST00000374379 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
CLIC4-201ENST00000374379 NOB1Q9ULX3 412 aaKnown RBP17.05■□□□□ 0.32
CLIC4-201ENST00000374379 RTEL1-TNFRSF6BF6WH68 1400 aa17.05■□□□□ 0.32
CLIC4-201ENST00000374379 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
CLIC4-201ENST00000374379 NLRP6P59044 892 aa17.05■□□□□ 0.32
CLIC4-201ENST00000374379 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
CLIC4-201ENST00000374379 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
CLIC4-201ENST00000374379 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
CLIC4-201ENST00000374379 CHD1O14646 1710 aa17.04■□□□□ 0.32
CLIC4-201ENST00000374379 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
CLIC4-201ENST00000374379 PDZRN3Q9UPQ7 1066 aa17.04■□□□□ 0.32
CLIC4-201ENST00000374379 PLA2R1Q13018 1463 aa17.04■□□□□ 0.32
CLIC4-201ENST00000374379 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
CLIC4-201ENST00000374379 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
CLIC4-201ENST00000374379 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
CLIC4-201ENST00000374379 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
CLIC4-201ENST00000374379 TNNQ9UQP3 1299 aa17.02■□□□□ 0.31
CLIC4-201ENST00000374379 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.31
CLIC4-201ENST00000374379 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
CLIC4-201ENST00000374379 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
CLIC4-201ENST00000374379 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
CLIC4-201ENST00000374379 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
CLIC4-201ENST00000374379 EIF2S2P20042 333 aaKnown RBP17■□□□□ 0.31
CLIC4-201ENST00000374379 GNAI1P63096 354 aa17■□□□□ 0.31
CLIC4-201ENST00000374379 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
CLIC4-201ENST00000374379 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
CLIC4-201ENST00000374379 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
CLIC4-201ENST00000374379 ATP7AQ04656 1500 aa17■□□□□ 0.31
CLIC4-201ENST00000374379 ZRANB1Q9UGI0 708 aa17■□□□□ 0.31
CLIC4-201ENST00000374379 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
CLIC4-201ENST00000374379 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
CLIC4-201ENST00000374379 FYB1O15117 783 aa16.99■□□□□ 0.31
CLIC4-201ENST00000374379 ASXL1Q8IXJ9 1541 aa16.99■□□□□ 0.31
CLIC4-201ENST00000374379 SSH1Q8WYL5 1049 aa16.99■□□□□ 0.31
CLIC4-201ENST00000374379 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
CLIC4-201ENST00000374379 KIF16BQ96L93 1317 aa16.98■□□□□ 0.31
CLIC4-201ENST00000374379 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
CLIC4-201ENST00000374379 KDM5CP41229 1560 aa16.97■□□□□ 0.31
CLIC4-201ENST00000374379 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
CLIC4-201ENST00000374379 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
CLIC4-201ENST00000374379 PSME1Q06323 249 aa16.97■□□□□ 0.31
CLIC4-201ENST00000374379 ANP32BQ92688 251 aaKnown RBP16.97■□□□□ 0.31
CLIC4-201ENST00000374379 ZNF428Q96B54 188 aa16.97■□□□□ 0.31
CLIC4-201ENST00000374379 IGHDP01880 384 aa16.96■□□□□ 0.31
CLIC4-201ENST00000374379 ATF7IPQ6VMQ6 1270 aa16.96■□□□□ 0.31
CLIC4-201ENST00000374379 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
CLIC4-201ENST00000374379 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
CLIC4-201ENST00000374379 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.31
CLIC4-201ENST00000374379 NKTRP30414 1462 aaKnown RBP16.96■□□□□ 0.31
CLIC4-201ENST00000374379 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
CLIC4-201ENST00000374379 TRIM6-TRIM34B2RNG4 842 aa16.95■□□□□ 0.3
CLIC4-201ENST00000374379 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
CLIC4-201ENST00000374379 ATP10AO60312 1499 aa16.95■□□□□ 0.3
CLIC4-201ENST00000374379 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
CLIC4-201ENST00000374379 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
CLIC4-201ENST00000374379 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
CLIC4-201ENST00000374379 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 GOLGA6L22H0YM25 854 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 WASLO00401 505 aaPredicted RBP16.93■□□□□ 0.3
CLIC4-201ENST00000374379 PREX2Q70Z35 1606 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 MCM10Q7L590 875 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
CLIC4-201ENST00000374379 FCHSD2O94868 740 aa16.92■□□□□ 0.3
CLIC4-201ENST00000374379 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
CLIC4-201ENST00000374379 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
CLIC4-201ENST00000374379 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
CLIC4-201ENST00000374379 NPATQ14207 1427 aa16.9■□□□□ 0.3
CLIC4-201ENST00000374379 KCNJ4P48050 445 aa16.9■□□□□ 0.3
CLIC4-201ENST00000374379 TEFQ10587 303 aa16.9■□□□□ 0.3
CLIC4-201ENST00000374379 HMMRO75330 724 aa16.9■□□□□ 0.3
CLIC4-201ENST00000374379 RLBP1P12271 317 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms