RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 BLMP54132 1417 aaPredicted RBP26.73■■□□□ 1.87
SRSF4-201ENST00000373795 RIMS2Q9UQ26 1411 aa26.73■■□□□ 1.87
SRSF4-201ENST00000373795 MINK1Q8N4C8 1332 aaPredicted RBP26.73■■□□□ 1.87
SRSF4-201ENST00000373795 POGKQ9P215 609 aa26.72■■□□□ 1.87
SRSF4-201ENST00000373795 PTPRMP28827 1452 aa26.72■■□□□ 1.87
SRSF4-201ENST00000373795 WDR43Q15061 677 aaKnown RBP eCLIP26.71■■□□□ 1.874e-6■□□□□ 11
SRSF4-201ENST00000373795 SRPK2P78362 688 aaKnown RBP26.69■■□□□ 1.86
SRSF4-201ENST00000373795 CDCA7LQ96GN5 454 aa26.69■■□□□ 1.86
SRSF4-201ENST00000373795 TNNT2P45379 298 aaPredicted RBP26.69■■□□□ 1.86
SRSF4-201ENST00000373795 PUS7Q96PZ0 661 aaKnown RBP26.68■■□□□ 1.86
SRSF4-201ENST00000373795 INSRP06213 1382 aa26.67■■□□□ 1.86
SRSF4-201ENST00000373795 TRHP20396 242 aaPredicted RBP26.66■■□□□ 1.86
SRSF4-201ENST00000373795 MORC1Q86VD1 984 aa26.65■■□□□ 1.86
SRSF4-201ENST00000373795 CEBPAP49715 358 aaPredicted RBP26.64■■□□□ 1.86
SRSF4-201ENST00000373795 WAPLQ7Z5K2 1190 aa26.64■■□□□ 1.86
SRSF4-201ENST00000373795 TNRQ92752 1358 aa26.64■■□□□ 1.85
SRSF4-201ENST00000373795 CCDC136Q96JN2 1154 aa26.62■■□□□ 1.85
SRSF4-201ENST00000373795 PDE3BQ13370 1112 aa26.62■■□□□ 1.85
SRSF4-201ENST00000373795 ANKRD36BQ8N2N9 1353 aa26.61■■□□□ 1.85
SRSF4-201ENST00000373795 CCDC146Q8IYE0 955 aa26.61■■□□□ 1.85
SRSF4-201ENST00000373795 CGNL1Q0VF96 1302 aa26.6■■□□□ 1.85
SRSF4-201ENST00000373795 PLPPR3Q6T4P5 718 aa26.6■■□□□ 1.85
SRSF4-201ENST00000373795 CDK19Q9BWU1 502 aa26.6■■□□□ 1.85
SRSF4-201ENST00000373795 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.58■■□□□ 1.85
SRSF4-201ENST00000373795 PLEKHH1Q9ULM0 1364 aa26.58■■□□□ 1.85
SRSF4-201ENST00000373795 SETD1AO15047 1707 aaKnown RBP26.58■■□□□ 1.85
SRSF4-201ENST00000373795 METP08581 1390 aa26.57■■□□□ 1.84
SRSF4-201ENST00000373795 A0A1W2PP64 1363 aa26.56■■□□□ 1.84
SRSF4-201ENST00000373795 NRXN3Q9Y4C0 1643 aa26.56■■□□□ 1.84
SRSF4-201ENST00000373795 RCAN3Q9UKA8 241 aa26.53■■□□□ 1.84
SRSF4-201ENST00000373795 TXNDC2Q86VQ3 553 aa26.53■■□□□ 1.84
SRSF4-201ENST00000373795 HDGFP51858 240 aaKnown RBP26.52■■□□□ 1.84
SRSF4-201ENST00000373795 ERICH6Q7L0X2 663 aa26.52■■□□□ 1.84
SRSF4-201ENST00000373795 USP32Q8NFA0 1604 aa26.52■■□□□ 1.84
SRSF4-201ENST00000373795 POLR3AO14802 1390 aaPredicted RBP26.52■■□□□ 1.84
SRSF4-201ENST00000373795 ATAD2Q6PL18 1390 aa26.52■■□□□ 1.84
SRSF4-201ENST00000373795 MTHFSP49914 203 aa26.51■■□□□ 1.84
SRSF4-201ENST00000373795 CABP1Q9NZU7 370 aa26.51■■□□□ 1.84
SRSF4-201ENST00000373795 ABCC11Q96J66 1382 aa26.51■■□□□ 1.83
SRSF4-201ENST00000373795 TMEM2Q9UHN6 1383 aa26.51■■□□□ 1.83
SRSF4-201ENST00000373795 UBR1Q8IWV7 1749 aa26.51■■□□□ 1.83
SRSF4-201ENST00000373795 APAF1O14727 1248 aa26.5■■□□□ 1.83
SRSF4-201ENST00000373795 RRP1P56182 461 aaKnown RBP26.49■■□□□ 1.83
SRSF4-201ENST00000373795 GGNBP2Q9H3C7 697 aa26.49■■□□□ 1.83
SRSF4-201ENST00000373795 NINLQ9Y2I6 1382 aa26.49■■□□□ 1.83
SRSF4-201ENST00000373795 CD163L1Q9NR16 1453 aa26.48■■□□□ 1.83
SRSF4-201ENST00000373795 TERF2IPQ9NYB0 399 aa26.48■■□□□ 1.83
SRSF4-201ENST00000373795 DLC1Q96QB1 1528 aa26.48■■□□□ 1.83
SRSF4-201ENST00000373795 LTKP29376 864 aa26.48■■□□□ 1.83
SRSF4-201ENST00000373795 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
SRSF4-201ENST00000373795 FYB1O15117 783 aa26.44■■□□□ 1.82
SRSF4-201ENST00000373795 NSD2O96028 1365 aa26.44■■□□□ 1.82
SRSF4-201ENST00000373795 EXOC6Q8TAG9 804 aa26.43■■□□□ 1.82
SRSF4-201ENST00000373795 HDGFL2Q7Z4V5 671 aaPredicted RBP26.42■■□□□ 1.82
SRSF4-201ENST00000373795 GOLGA2Q08379 1002 aa26.42■■□□□ 1.82
SRSF4-201ENST00000373795 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
SRSF4-201ENST00000373795 C3P01024 1663 aa26.41■■□□□ 1.82
SRSF4-201ENST00000373795 DUSP27Q5VZP5 1158 aa26.4■■□□□ 1.82
SRSF4-201ENST00000373795 WASLO00401 505 aaPredicted RBP26.4■■□□□ 1.82
SRSF4-201ENST00000373795 SPINK5Q9NQ38 1064 aaPredicted RBP26.39■■□□□ 1.82
SRSF4-201ENST00000373795 NLRP1Q9C000 1473 aa26.38■■□□□ 1.81
SRSF4-201ENST00000373795 CFAP53Q96M91 514 aa26.38■■□□□ 1.81
SRSF4-201ENST00000373795 PLIN1O60240 522 aa26.38■■□□□ 1.81
SRSF4-201ENST00000373795 ADAMTS13Q76LX8 1427 aa26.38■■□□□ 1.81
SRSF4-201ENST00000373795 SLC26A8Q96RN1 970 aa26.38■■□□□ 1.81
SRSF4-201ENST00000373795 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
SRSF4-201ENST00000373795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.37■■□□□ 1.81
SRSF4-201ENST00000373795 FER1L4A9Z1Z3 1794 aa26.37■■□□□ 1.81
SRSF4-201ENST00000373795 SLFN5Q08AF3 891 aa26.36■■□□□ 1.81
SRSF4-201ENST00000373795 DMRT2Q9Y5R5 561 aa26.36■■□□□ 1.81
SRSF4-201ENST00000373795 NEUROD2Q15784 382 aa26.34■■□□□ 1.81
SRSF4-201ENST00000373795 ROBO2Q9HCK4 1378 aa26.34■■□□□ 1.81
SRSF4-201ENST00000373795 SIRT1Q96EB6 747 aa26.34■■□□□ 1.81
SRSF4-201ENST00000373795 RRP7AQ9Y3A4 280 aaKnown RBP26.33■■□□□ 1.81
SRSF4-201ENST00000373795 PLEKHG1Q9ULL1 1385 aa26.33■■□□□ 1.81
SRSF4-201ENST00000373795 TECPR2O15040 1411 aa26.33■■□□□ 1.81
SRSF4-201ENST00000373795 NUDT16Q96DE0 195 aaKnown RBP26.33■■□□□ 1.81
SRSF4-201ENST00000373795 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
SRSF4-201ENST00000373795 EID1Q9Y6B2 187 aa26.32■■□□□ 1.8
SRSF4-201ENST00000373795 RUNDC1Q96C34 613 aa26.32■■□□□ 1.8
SRSF4-201ENST00000373795 FBLN1P23142 703 aa26.31■■□□□ 1.8
SRSF4-201ENST00000373795 TRMT2AQ8IZ69 625 aaKnown RBP26.31■■□□□ 1.8
SRSF4-201ENST00000373795 KNDC1Q76NI1 1749 aa26.3■■□□□ 1.8
SRSF4-201ENST00000373795 PPIP5K1Q6PFW1 1433 aa26.3■■□□□ 1.8
SRSF4-201ENST00000373795 U2AF1L5P0DN76 240 aaPredicted RBP26.3■■□□□ 1.8
SRSF4-201ENST00000373795 U2AF1Q01081 240 aaKnown RBP eCLIP26.3■■□□□ 1.85e-9■■□□□ 13.5
SRSF4-201ENST00000373795 TCP11L2Q8N4U5 519 aa26.3■■□□□ 1.8
SRSF4-201ENST00000373795 WWC1Q8IX03 1113 aa26.29■■□□□ 1.8
SRSF4-201ENST00000373795 NOP58Q9Y2X3 529 aaKnown RBP26.28■■□□□ 1.8
SRSF4-201ENST00000373795 CPS1P31327 1500 aa26.28■■□□□ 1.8
SRSF4-201ENST00000373795 ANKRD26Q9UPS8 1709 aa26.27■■□□□ 1.8
SRSF4-201ENST00000373795 ATP7BP35670 1465 aa26.27■■□□□ 1.8
SRSF4-201ENST00000373795 CCDC61Q9Y6R9 512 aa26.27■■□□□ 1.8
SRSF4-201ENST00000373795 MED14O60244 1454 aa26.27■■□□□ 1.8
SRSF4-201ENST00000373795 PAK3O75914 559 aaPredicted RBP26.26■■□□□ 1.79
SRSF4-201ENST00000373795 THEMISQ8N1K5 641 aaPredicted RBP26.26■■□□□ 1.79
SRSF4-201ENST00000373795 PTPRUQ92729 1446 aa26.25■■□□□ 1.79
SRSF4-201ENST00000373795 PRR36Q9H6K5 1346 aa26.25■■□□□ 1.79
SRSF4-201ENST00000373795 KIF20BQ96Q89 1820 aa26.25■■□□□ 1.79
SRSF4-201ENST00000373795 NUTM2FA1L443 756 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms