RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 PRPF40AO75400 957 aaKnown RBP11.1□□□□□ -0.63
PTPRT-205ENST00000373193 ERLIN2O94905 339 aa11.1□□□□□ -0.63
PTPRT-205ENST00000373193 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
PTPRT-205ENST00000373193 SAFBQ15424 915 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTPRT-205ENST00000373193 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
PTPRT-205ENST00000373193 HMGN5P82970 282 aaKnown RBP11.09□□□□□ -0.63
PTPRT-205ENST00000373193 TRDNQ13061 729 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 EIF2S2P20042 333 aaKnown RBP11.09□□□□□ -0.63
PTPRT-205ENST00000373193 CBX1P83916 185 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 C9orf78Q9NZ63 289 aaPredicted RBP11.09□□□□□ -0.63
PTPRT-205ENST00000373193 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 NUTM2FA1L443 756 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 FIBPO43427 364 aa11.09□□□□□ -0.63
PTPRT-205ENST00000373193 RRP9O43818 475 aaKnown RBP11.09□□□□□ -0.63
PTPRT-205ENST00000373193 AMOTL1Q8IY63 956 aa11.08□□□□□ -0.64
PTPRT-205ENST00000373193 NF2P35240 595 aa11.08□□□□□ -0.64
PTPRT-205ENST00000373193 AMPHP49418 695 aa11.08□□□□□ -0.64
PTPRT-205ENST00000373193 CGNQ9P2M7 1197 aaKnown RBP11.08□□□□□ -0.64
PTPRT-205ENST00000373193 SMARCE1Q969G3 411 aa11.08□□□□□ -0.64
PTPRT-205ENST00000373193 USP8P40818 1118 aa11.07□□□□□ -0.64
PTPRT-205ENST00000373193 NLRP13Q86W25 1043 aa11.07□□□□□ -0.64
PTPRT-205ENST00000373193 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
PTPRT-205ENST00000373193 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
PTPRT-205ENST00000373193 VPS37DQ86XT2 251 aa11.07□□□□□ -0.64
PTPRT-205ENST00000373193 LRRCC1Q9C099 1032 aa11.07□□□□□ -0.64
PTPRT-205ENST00000373193 CCP110O43303 1012 aa11.07□□□□□ -0.64
PTPRT-205ENST00000373193 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
PTPRT-205ENST00000373193 RBM33Q96EV2 1170 aaKnown RBP11.07□□□□□ -0.64
PTPRT-205ENST00000373193 EIF3AQ14152 1382 aaKnown RBP11.07□□□□□ -0.64
PTPRT-205ENST00000373193 LRRFIP2Q9Y608 721 aaKnown RBP11.07□□□□□ -0.64
PTPRT-205ENST00000373193 ERICH2A1L162 156 aa11.06□□□□□ -0.64
PTPRT-205ENST00000373193 CCDC181Q5TID7 509 aa11.06□□□□□ -0.64
PTPRT-205ENST00000373193 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
PTPRT-205ENST00000373193 EIF3JO75822 258 aaKnown RBP11.06□□□□□ -0.64
PTPRT-205ENST00000373193 TMEM132AQ24JP5 1023 aa11.06□□□□□ -0.64
PTPRT-205ENST00000373193 KIF15Q9NS87 1388 aa11.05□□□□□ -0.64
PTPRT-205ENST00000373193 EZRP15311 586 aaKnown RBP11.05□□□□□ -0.64
PTPRT-205ENST00000373193 SERPINC1P01008 464 aa11.05□□□□□ -0.64
PTPRT-205ENST00000373193 BCCIPQ9P287 314 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPRT-205ENST00000373193 POLR3GO15318 223 aaPredicted RBP11.04□□□□□ -0.64
PTPRT-205ENST00000373193 GGT6Q6P531 493 aa11.04□□□□□ -0.64
PTPRT-205ENST00000373193 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
PTPRT-205ENST00000373193 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
PTPRT-205ENST00000373193 SRRTQ9BXP5 876 aaKnown RBP11.04□□□□□ -0.64
PTPRT-205ENST00000373193 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
PTPRT-205ENST00000373193 FILIP1LQ4L180 1135 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 RNF187Q5TA31 235 aaPredicted RBP11.03□□□□□ -0.64
PTPRT-205ENST00000373193 CWC22Q9HCG8 908 aaKnown RBP11.03□□□□□ -0.64
PTPRT-205ENST00000373193 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
PTPRT-205ENST00000373193 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 SEPT11Q9NVA2 429 aaKnown RBP11.03□□□□□ -0.64
PTPRT-205ENST00000373193 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 PANK1Q8TE04 598 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
PTPRT-205ENST00000373193 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.64
PTPRT-205ENST00000373193 ERLIN1O75477 346 aa11.02□□□□□ -0.64
PTPRT-205ENST00000373193 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.64
PTPRT-205ENST00000373193 SYCP1Q15431 976 aa11.02□□□□□ -0.64
PTPRT-205ENST00000373193 RALYLQ86SE5 291 aaKnown RBP11.02□□□□□ -0.64
PTPRT-205ENST00000373193 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.02□□□□□ -0.64
PTPRT-205ENST00000373193 PHLDB1Q86UU1 1377 aa11.02□□□□□ -0.64
PTPRT-205ENST00000373193 ZBED9Q6R2W3 1325 aa11.02□□□□□ -0.64
PTPRT-205ENST00000373193 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
PTPRT-205ENST00000373193 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.65
PTPRT-205ENST00000373193 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
PTPRT-205ENST00000373193 MSH5O43196 834 aa11.02□□□□□ -0.65
PTPRT-205ENST00000373193 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
PTPRT-205ENST00000373193 BRMS1Q9HCU9 246 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 CCDC113Q9H0I3 377 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 PANK3Q9H999 370 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 ANKRD18AQ8IVF6 992 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 NGDNQ8NEJ9 315 aaKnown RBP11.01□□□□□ -0.65
PTPRT-205ENST00000373193 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
PTPRT-205ENST00000373193 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
PTPRT-205ENST00000373193 TNMDQ9H2S6 317 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 DDX19BQ9UMR2 479 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
PTPRT-205ENST00000373193 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
PTPRT-205ENST00000373193 KRT18P05783 430 aaKnown RBP11□□□□□ -0.65
PTPRT-205ENST00000373193 SLC26A8Q96RN1 970 aa11□□□□□ -0.65
PTPRT-205ENST00000373193 C1orf141Q5JVX7 400 aa11□□□□□ -0.65
PTPRT-205ENST00000373193 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
PTPRT-205ENST00000373193 MPHOSPH9Q99550 1183 aa11□□□□□ -0.65
PTPRT-205ENST00000373193 MBD3O95983 291 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 PUS7Q96PZ0 661 aaKnown RBP10.99□□□□□ -0.65
PTPRT-205ENST00000373193 TMX1Q9H3N1 280 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 CDC45O75419 566 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 ZHX3Q9H4I2 956 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 MAP2K1Q02750 393 aaPredicted RBP10.99□□□□□ -0.65
PTPRT-205ENST00000373193 STK3Q13188 491 aa10.99□□□□□ -0.65
PTPRT-205ENST00000373193 GTF2F1P35269 517 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPRT-205ENST00000373193 STK38Q15208 465 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms