RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 NINLQ9Y2I6 1382 aa33.52■■■□□ 2.96
CTSA-203ENST00000372459 CEBPAP49715 358 aaPredicted RBP33.52■■■□□ 2.96
CTSA-203ENST00000372459 MINK1Q8N4C8 1332 aaPredicted RBP33.51■■■□□ 2.95
CTSA-203ENST00000372459 ABCC11Q96J66 1382 aa33.5■■■□□ 2.95
CTSA-203ENST00000372459 ANKRD36BQ8N2N9 1353 aa33.5■■■□□ 2.95
CTSA-203ENST00000372459 USP32Q8NFA0 1604 aa33.5■■■□□ 2.95
CTSA-203ENST00000372459 SRPK2P78362 688 aaKnown RBP33.49■■■□□ 2.95
CTSA-203ENST00000372459 ATAD2Q6PL18 1390 aa33.48■■■□□ 2.95
CTSA-203ENST00000372459 BLMP54132 1417 aaPredicted RBP33.46■■■□□ 2.95
CTSA-203ENST00000372459 SMG6Q86US8 1419 aaKnown RBP33.46■■■□□ 2.95
CTSA-203ENST00000372459 METP08581 1390 aa33.44■■■□□ 2.94
CTSA-203ENST00000372459 DNAJC5Q9H3Z4 198 aa33.43■■■□□ 2.94
CTSA-203ENST00000372459 CGNL1Q0VF96 1302 aa33.42■■■□□ 2.94
CTSA-203ENST00000372459 BCANQ96GW7 911 aa33.41■■■□□ 2.94
CTSA-203ENST00000372459 WDR43Q15061 677 aaKnown RBP eCLIP33.4■■■□□ 2.94
CTSA-203ENST00000372459 NUDCQ9Y266 331 aa33.4■■■□□ 2.94
CTSA-203ENST00000372459 KNDC1Q76NI1 1749 aa33.4■■■□□ 2.94
CTSA-203ENST00000372459 CDK19Q9BWU1 502 aa33.39■■■□□ 2.94
CTSA-203ENST00000372459 WAPLQ7Z5K2 1190 aa33.38■■■□□ 2.93
CTSA-203ENST00000372459 PLEKHG1Q9ULL1 1385 aa33.38■■■□□ 2.93
CTSA-203ENST00000372459 SENP3-EIF4A1A0A087X0R7 540 aa33.38■■■□□ 2.93
CTSA-203ENST00000372459 MORC1Q86VD1 984 aa33.38■■■□□ 2.93
CTSA-203ENST00000372459 NSD2O96028 1365 aa33.37■■■□□ 2.93
CTSA-203ENST00000372459 TECPR2O15040 1411 aa33.36■■■□□ 2.93
CTSA-203ENST00000372459 SIRT1Q96EB6 747 aa33.36■■■□□ 2.93
CTSA-203ENST00000372459 ADAMTS8Q9UP79 889 aa33.36■■■□□ 2.93
CTSA-203ENST00000372459 PLEKHH1Q9ULM0 1364 aa33.36■■■□□ 2.93
CTSA-203ENST00000372459 PLPPR3Q6T4P5 718 aa33.35■■■□□ 2.93
CTSA-203ENST00000372459 FAM135BQ49AJ0 1406 aa33.35■■■□□ 2.93
CTSA-203ENST00000372459 EID1Q9Y6B2 187 aa33.34■■■□□ 2.93
CTSA-203ENST00000372459 A0A1W2PP64 1363 aa33.34■■■□□ 2.93
CTSA-203ENST00000372459 ADAMTS13Q76LX8 1427 aa33.34■■■□□ 2.93
CTSA-203ENST00000372459 SLIT1O75093 1534 aa33.34■■■□□ 2.93
CTSA-203ENST00000372459 LTKP29376 864 aa33.33■■■□□ 2.93
CTSA-203ENST00000372459 TXNDC2Q86VQ3 553 aa33.33■■■□□ 2.93
CTSA-203ENST00000372459 TERF2IPQ9NYB0 399 aa33.33■■■□□ 2.93
CTSA-203ENST00000372459 CPS1P31327 1500 aa33.32■■■□□ 2.93
CTSA-203ENST00000372459 ARHGAP23Q9P227 1491 aa33.31■■■□□ 2.92
CTSA-203ENST00000372459 PDE3BQ13370 1112 aa33.3■■■□□ 2.92
CTSA-203ENST00000372459 POLR3AO14802 1390 aaPredicted RBP33.29■■■□□ 2.92
CTSA-203ENST00000372459 THEMISQ8N1K5 641 aaPredicted RBP33.28■■■□□ 2.92
CTSA-203ENST00000372459 CD163L1Q9NR16 1453 aa33.28■■■□□ 2.92
CTSA-203ENST00000372459 HDGFL2Q7Z4V5 671 aaPredicted RBP33.27■■■□□ 2.92
CTSA-203ENST00000372459 SALL2Q9Y467 1007 aaPredicted RBP33.27■■■□□ 2.92
CTSA-203ENST00000372459 MED14O60244 1454 aa33.24■■■□□ 2.91
CTSA-203ENST00000372459 WASLO00401 505 aaPredicted RBP33.23■■■□□ 2.91
CTSA-203ENST00000372459 RIMS1Q86UR5 1692 aaKnown RBP33.23■■■□□ 2.91
CTSA-203ENST00000372459 CABP1Q9NZU7 370 aa33.23■■■□□ 2.91
CTSA-203ENST00000372459 TNNT2P45379 298 aaPredicted RBP33.21■■■□□ 2.91
CTSA-203ENST00000372459 ATP7BP35670 1465 aa33.2■■■□□ 2.91
CTSA-203ENST00000372459 ERICH6BQ5W0A0 696 aa33.2■■■□□ 2.91
CTSA-203ENST00000372459 ROBO2Q9HCK4 1378 aa33.17■■■□□ 2.9
CTSA-203ENST00000372459 IRX6P78412 446 aaPredicted RBP33.17■■■□□ 2.9
CTSA-203ENST00000372459 CEP170BQ9Y4F5 1589 aaPredicted RBP33.16■■■□□ 2.9
CTSA-203ENST00000372459 ANKRD26Q9UPS8 1709 aa33.16■■■□□ 2.9
CTSA-203ENST00000372459 SLC26A8Q96RN1 970 aa33.15■■■□□ 2.9
CTSA-203ENST00000372459 TBX22Q9Y458 520 aa33.15■■■□□ 2.9
CTSA-203ENST00000372459 ADAMTSL3P82987 1691 aa33.14■■■□□ 2.9
CTSA-203ENST00000372459 DIP2AQ14689 1571 aa33.14■■■□□ 2.9
CTSA-203ENST00000372459 CFAP53Q96M91 514 aa33.14■■■□□ 2.9
CTSA-203ENST00000372459 MTHFSP49914 203 aa33.13■■■□□ 2.89
CTSA-203ENST00000372459 MYT1Q01538 1121 aa33.13■■■□□ 2.89
CTSA-203ENST00000372459 FYB1O15117 783 aa33.12■■■□□ 2.89
CTSA-203ENST00000372459 GGNBP2Q9H3C7 697 aa33.12■■■□□ 2.89
CTSA-203ENST00000372459 RNF123Q5XPI4 1314 aa33.12■■■□□ 2.89
CTSA-203ENST00000372459 PPIP5K1Q6PFW1 1433 aa33.11■■■□□ 2.89
CTSA-203ENST00000372459 SHPRHQ149N8 1683 aa33.11■■■□□ 2.89
CTSA-203ENST00000372459 PTPRUQ92729 1446 aa33.1■■■□□ 2.89
CTSA-203ENST00000372459 ADGRB2O60241 1585 aa33.1■■■□□ 2.89
CTSA-203ENST00000372459 KIF20BQ96Q89 1820 aa33.1■■■□□ 2.89
CTSA-203ENST00000372459 NUDT16Q96DE0 195 aaKnown RBP33.09■■■□□ 2.89
CTSA-203ENST00000372459 TSHZ2Q9NRE2 1034 aa33.09■■■□□ 2.89
CTSA-203ENST00000372459 CCDC146Q8IYE0 955 aa33.08■■■□□ 2.89
CTSA-203ENST00000372459 CDCA7LQ96GN5 454 aa33.07■■■□□ 2.88
CTSA-203ENST00000372459 CCDC61Q9Y6R9 512 aa33.07■■■□□ 2.88
CTSA-203ENST00000372459 CPSF1Q10570 1443 aaKnown RBP33.06■■■□□ 2.88
CTSA-203ENST00000372459 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.06■■■□□ 2.88
CTSA-203ENST00000372459 AMOTL2Q9Y2J4 779 aa33.05■■■□□ 2.88
CTSA-203ENST00000372459 PTCH1Q13635 1447 aa33.03■■■□□ 2.88
CTSA-203ENST00000372459 CDC42BPGQ6DT37 1551 aa33.03■■■□□ 2.88
CTSA-203ENST00000372459 NGEFQ8N5V2 710 aa33.03■■■□□ 2.88
CTSA-203ENST00000372459 ZNF521Q96K83 1311 aa33.03■■■□□ 2.88
CTSA-203ENST00000372459 ZNF142P52746 1687 aaPredicted RBP33.03■■■□□ 2.88
CTSA-203ENST00000372459 EDC4Q6P2E9 1401 aaKnown RBP33.02■■■□□ 2.88
CTSA-203ENST00000372459 APAF1O14727 1248 aa33.01■■■□□ 2.87
CTSA-203ENST00000372459 RCAN3Q9UKA8 241 aa33■■■□□ 2.87
CTSA-203ENST00000372459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.98■■■□□ 2.87
CTSA-203ENST00000372459 PPP4R2Q9NY27 417 aa32.98■■■□□ 2.87
CTSA-203ENST00000372459 GOLGA2Q08379 1002 aa32.97■■■□□ 2.87
CTSA-203ENST00000372459 PRR36Q9H6K5 1346 aa32.97■■■□□ 2.87
CTSA-203ENST00000372459 PIK3R4Q99570 1358 aa32.96■■■□□ 2.87
CTSA-203ENST00000372459 MON2Q7Z3U7 1717 aa32.96■■■□□ 2.87
CTSA-203ENST00000372459 SETD1BQ9UPS6 1966 aaKnown RBP32.96■■■□□ 2.87
CTSA-203ENST00000372459 ITSN1Q15811 1721 aa32.95■■■□□ 2.87
CTSA-203ENST00000372459 ZNF692Q9BU19 519 aaPredicted RBP32.95■■■□□ 2.87
CTSA-203ENST00000372459 AKAP12Q02952 1782 aa32.95■■■□□ 2.86
CTSA-203ENST00000372459 RUNDC1Q96C34 613 aa32.94■■■□□ 2.86
CTSA-203ENST00000372459 XRN1Q8IZH2 1706 aaKnown RBP32.94■■■□□ 2.86
CTSA-203ENST00000372459 NCKAP5LQ9HCH0 1330 aa32.94■■■□□ 2.86
CTSA-203ENST00000372459 ANKLE2Q86XL3 938 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms