RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 E9PCH4 1651 aa12.62□□□□□ -0.39
YIPF3-201ENST00000372417 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
YIPF3-201ENST00000372417 R3HDM1Q15032 1099 aaKnown RBP12.62□□□□□ -0.39
YIPF3-201ENST00000372417 SLIT2O94813 1529 aa12.62□□□□□ -0.39
YIPF3-201ENST00000372417 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
YIPF3-201ENST00000372417 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
YIPF3-201ENST00000372417 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
YIPF3-201ENST00000372417 ABCC5O15440 1437 aa12.61□□□□□ -0.39
YIPF3-201ENST00000372417 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
YIPF3-201ENST00000372417 KRT27Q7Z3Y8 459 aa12.59□□□□□ -0.39
YIPF3-201ENST00000372417 DAPK1P53355 1430 aa12.58□□□□□ -0.4
YIPF3-201ENST00000372417 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
YIPF3-201ENST00000372417 PXDNQ92626 1479 aa12.58□□□□□ -0.4
YIPF3-201ENST00000372417 RREB1Q92766 1687 aa12.57□□□□□ -0.4
YIPF3-201ENST00000372417 EN1Q05925 392 aaPredicted RBP12.57□□□□□ -0.4
YIPF3-201ENST00000372417 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
YIPF3-201ENST00000372417 NUP188Q5SRE5 1749 aa12.56□□□□□ -0.4
YIPF3-201ENST00000372417 ABCA3Q99758 1704 aa12.56□□□□□ -0.4
YIPF3-201ENST00000372417 METP08581 1390 aa12.56□□□□□ -0.4
YIPF3-201ENST00000372417 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
YIPF3-201ENST00000372417 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
YIPF3-201ENST00000372417 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
YIPF3-201ENST00000372417 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
YIPF3-201ENST00000372417 ADGRL2O95490 1459 aa12.53□□□□□ -0.4
YIPF3-201ENST00000372417 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-201ENST00000372417 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
YIPF3-201ENST00000372417 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
YIPF3-201ENST00000372417 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
YIPF3-201ENST00000372417 VPS72Q15906 364 aa12.52□□□□□ -0.41
YIPF3-201ENST00000372417 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.41
YIPF3-201ENST00000372417 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
YIPF3-201ENST00000372417 UTRNP46939 3433 aa12.51□□□□□ -0.41
YIPF3-201ENST00000372417 A0A0G2JS52 829 aa12.51□□□□□ -0.41
YIPF3-201ENST00000372417 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
YIPF3-201ENST00000372417 MYT1Q01538 1121 aa12.51□□□□□ -0.41
YIPF3-201ENST00000372417 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
YIPF3-201ENST00000372417 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
YIPF3-201ENST00000372417 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
YIPF3-201ENST00000372417 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
YIPF3-201ENST00000372417 KIF1BO60333 1816 aa12.48□□□□□ -0.41
YIPF3-201ENST00000372417 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
YIPF3-201ENST00000372417 LRPPRCP42704 1394 aaKnown RBP12.47□□□□□ -0.41
YIPF3-201ENST00000372417 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
YIPF3-201ENST00000372417 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
YIPF3-201ENST00000372417 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.41
YIPF3-201ENST00000372417 NEXMIFQ5QGS0 1516 aa12.46□□□□□ -0.42
YIPF3-201ENST00000372417 ANKRD50Q9ULJ7 1429 aa12.45□□□□□ -0.42
YIPF3-201ENST00000372417 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
YIPF3-201ENST00000372417 FOXO3O43524 673 aa12.45□□□□□ -0.42
YIPF3-201ENST00000372417 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
YIPF3-201ENST00000372417 ROBO2Q9HCK4 1378 aa12.44□□□□□ -0.42
YIPF3-201ENST00000372417 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
YIPF3-201ENST00000372417 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
YIPF3-201ENST00000372417 CAMKK2Q96RR4 588 aa12.44□□□□□ -0.42
YIPF3-201ENST00000372417 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
YIPF3-201ENST00000372417 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
YIPF3-201ENST00000372417 FMN2Q9NZ56 1722 aa12.43□□□□□ -0.42
YIPF3-201ENST00000372417 MYOM1P52179 1685 aa12.43□□□□□ -0.42
YIPF3-201ENST00000372417 ZNF326Q5BKZ1 582 aaKnown RBP12.43□□□□□ -0.42
YIPF3-201ENST00000372417 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
YIPF3-201ENST00000372417 KANK4Q5T7N3 995 aaPredicted RBP12.43□□□□□ -0.42
YIPF3-201ENST00000372417 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
YIPF3-201ENST00000372417 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
YIPF3-201ENST00000372417 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
YIPF3-201ENST00000372417 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
YIPF3-201ENST00000372417 KCNQ2O43526 872 aa12.42□□□□□ -0.42
YIPF3-201ENST00000372417 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
YIPF3-201ENST00000372417 NBPF8Q3BBV2 869 aa12.41□□□□□ -0.42
YIPF3-201ENST00000372417 NBPF14Q5TI25 921 aa12.41□□□□□ -0.42
YIPF3-201ENST00000372417 IFT172Q9UG01 1749 aa12.4□□□□□ -0.42
YIPF3-201ENST00000372417 TNS3Q68CZ2 1445 aa12.39□□□□□ -0.43
YIPF3-201ENST00000372417 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
YIPF3-201ENST00000372417 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
YIPF3-201ENST00000372417 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
YIPF3-201ENST00000372417 CLTCL1P53675 1640 aa12.38□□□□□ -0.43
YIPF3-201ENST00000372417 TRIM37O94972 964 aa12.38□□□□□ -0.43
YIPF3-201ENST00000372417 APBA3O96018 575 aa12.38□□□□□ -0.43
YIPF3-201ENST00000372417 NAIPQ13075 1403 aa12.37□□□□□ -0.43
YIPF3-201ENST00000372417 PPLO60437 1756 aa12.36□□□□□ -0.43
YIPF3-201ENST00000372417 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
YIPF3-201ENST00000372417 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
YIPF3-201ENST00000372417 KNDC1Q76NI1 1749 aa12.35□□□□□ -0.43
YIPF3-201ENST00000372417 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
YIPF3-201ENST00000372417 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
YIPF3-201ENST00000372417 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
YIPF3-201ENST00000372417 FAM83GA6ND36 823 aa12.34□□□□□ -0.43
YIPF3-201ENST00000372417 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
YIPF3-201ENST00000372417 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
YIPF3-201ENST00000372417 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
YIPF3-201ENST00000372417 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
YIPF3-201ENST00000372417 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
YIPF3-201ENST00000372417 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
YIPF3-201ENST00000372417 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
YIPF3-201ENST00000372417 RRBP1Q9P2E9 1410 aaKnown RBP12.32□□□□□ -0.44
YIPF3-201ENST00000372417 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
YIPF3-201ENST00000372417 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
YIPF3-201ENST00000372417 PSME1Q06323 249 aa12.31□□□□□ -0.44
YIPF3-201ENST00000372417 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
YIPF3-201ENST00000372417 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
YIPF3-201ENST00000372417 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms