RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 C8orf34Q49A92 452 aa21.64■■□□□ 1.06
PCIF1-201ENST00000372409 FRAT1Q92837 279 aaPredicted RBP21.64■■□□□ 1.06
PCIF1-201ENST00000372409 CD109Q6YHK3 1445 aa21.64■■□□□ 1.06
PCIF1-201ENST00000372409 PPM1GO15355 546 aaPredicted RBP21.64■■□□□ 1.05
PCIF1-201ENST00000372409 PPLO60437 1756 aa21.63■■□□□ 1.05
PCIF1-201ENST00000372409 PANK1Q8TE04 598 aa21.63■■□□□ 1.05
PCIF1-201ENST00000372409 RUNDC1Q96C34 613 aa21.63■■□□□ 1.05
PCIF1-201ENST00000372409 COG6Q9Y2V7 657 aa21.63■■□□□ 1.05
PCIF1-201ENST00000372409 MTHFSP49914 203 aa21.62■■□□□ 1.05
PCIF1-201ENST00000372409 POGZQ7Z3K3 1410 aa21.62■■□□□ 1.05
PCIF1-201ENST00000372409 TCP11L2Q8N4U5 519 aa21.62■■□□□ 1.05
PCIF1-201ENST00000372409 IGHDP01880 384 aa21.61■■□□□ 1.05
PCIF1-201ENST00000372409 CGNL1Q0VF96 1302 aa21.61■■□□□ 1.05
PCIF1-201ENST00000372409 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
PCIF1-201ENST00000372409 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
PCIF1-201ENST00000372409 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
PCIF1-201ENST00000372409 PDE3AQ14432 1141 aa21.59■■□□□ 1.05
PCIF1-201ENST00000372409 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
PCIF1-201ENST00000372409 RPGRIP1LQ68CZ1 1315 aa21.59■■□□□ 1.05
PCIF1-201ENST00000372409 ZC3H13Q5T200 1668 aaKnown RBP21.59■■□□□ 1.05
PCIF1-201ENST00000372409 SHPRHQ149N8 1683 aa21.58■■□□□ 1.05
PCIF1-201ENST00000372409 USP35Q9P2H5 1018 aa21.57■■□□□ 1.04
PCIF1-201ENST00000372409 HECW2Q9P2P5 1572 aa21.57■■□□□ 1.04
PCIF1-201ENST00000372409 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
PCIF1-201ENST00000372409 RAPGEF3O95398 923 aa21.57■■□□□ 1.04
PCIF1-201ENST00000372409 CLUAP1Q96AJ1 413 aa21.57■■□□□ 1.04
PCIF1-201ENST00000372409 MLH3Q9UHC1 1453 aa21.57■■□□□ 1.04
PCIF1-201ENST00000372409 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
PCIF1-201ENST00000372409 CABP2Q9NPB3 220 aa21.56■■□□□ 1.04
PCIF1-201ENST00000372409 VGFO15240 615 aaPredicted RBP21.55■■□□□ 1.04
PCIF1-201ENST00000372409 ABCC3O15438 1527 aa21.55■■□□□ 1.04
PCIF1-201ENST00000372409 CFAP74Q9C0B2 1584 aa21.54■■□□□ 1.04
PCIF1-201ENST00000372409 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
PCIF1-201ENST00000372409 RARSP54136 660 aaKnown RBP21.54■■□□□ 1.04
PCIF1-201ENST00000372409 U2AF1Q01081 240 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCIF1-201ENST00000372409 NINLQ9Y2I6 1382 aa21.53■■□□□ 1.04
PCIF1-201ENST00000372409 STK26Q9P289 416 aa21.53■■□□□ 1.04
PCIF1-201ENST00000372409 GLI2P10070 1586 aa21.53■■□□□ 1.04
PCIF1-201ENST00000372409 WDR63Q8IWG1 891 aa21.51■■□□□ 1.03
PCIF1-201ENST00000372409 IQSEC2Q5JU85 1478 aa21.5■■□□□ 1.03
PCIF1-201ENST00000372409 TNNQ9UQP3 1299 aa21.5■■□□□ 1.03
PCIF1-201ENST00000372409 CAMSAP1Q5T5Y3 1602 aa21.5■■□□□ 1.03
PCIF1-201ENST00000372409 ANKRD36BQ8N2N9 1353 aa21.5■■□□□ 1.03
PCIF1-201ENST00000372409 SIGLEC1Q9BZZ2 1709 aa21.49■■□□□ 1.03
PCIF1-201ENST00000372409 SRPK2P78362 688 aaKnown RBP21.49■■□□□ 1.03
PCIF1-201ENST00000372409 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
PCIF1-201ENST00000372409 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
PCIF1-201ENST00000372409 RLBP1P12271 317 aa21.48■■□□□ 1.03
PCIF1-201ENST00000372409 IDI1Q13907 227 aa21.48■■□□□ 1.03
PCIF1-201ENST00000372409 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
PCIF1-201ENST00000372409 USP32Q8NFA0 1604 aa21.47■■□□□ 1.03
PCIF1-201ENST00000372409 NFKBIBQ15653 356 aa21.47■■□□□ 1.03
PCIF1-201ENST00000372409 ARHGEF28Q8N1W1 1705 aaKnown RBP21.47■■□□□ 1.03
PCIF1-201ENST00000372409 U2SURPO15042 1029 aaKnown RBP21.46■■□□□ 1.03
PCIF1-201ENST00000372409 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
PCIF1-201ENST00000372409 MAPK8IP3Q9UPT6 1336 aa21.46■■□□□ 1.03
PCIF1-201ENST00000372409 NEXMIFQ5QGS0 1516 aa21.45■■□□□ 1.02
PCIF1-201ENST00000372409 GGNBP2Q9H3C7 697 aa21.45■■□□□ 1.02
PCIF1-201ENST00000372409 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
PCIF1-201ENST00000372409 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
PCIF1-201ENST00000372409 PUS7Q96PZ0 661 aaKnown RBP21.44■■□□□ 1.02
PCIF1-201ENST00000372409 PCDHB15Q9Y5E8 787 aa21.44■■□□□ 1.02
PCIF1-201ENST00000372409 NSD2O96028 1365 aa21.44■■□□□ 1.02
PCIF1-201ENST00000372409 A0A1W2PP64 1363 aa21.42■■□□□ 1.02
PCIF1-201ENST00000372409 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
PCIF1-201ENST00000372409 TSR2Q969E8 191 aaKnown RBP21.42■■□□□ 1.02
PCIF1-201ENST00000372409 PIK3C2BO00750 1634 aa21.41■■□□□ 1.02
PCIF1-201ENST00000372409 SEC24BO95487 1268 aa21.41■■□□□ 1.02
PCIF1-201ENST00000372409 POGKQ9P215 609 aa21.39■■□□□ 1.02
PCIF1-201ENST00000372409 DIP2CQ9Y2E4 1556 aa21.39■■□□□ 1.01
PCIF1-201ENST00000372409 FTSJ3Q8IY81 847 aaKnown RBP21.39■■□□□ 1.01
PCIF1-201ENST00000372409 NEO1Q92859 1461 aa21.38■■□□□ 1.01
PCIF1-201ENST00000372409 PRAM1Q96QH2 718 aa21.38■■□□□ 1.01
PCIF1-201ENST00000372409 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
PCIF1-201ENST00000372409 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
PCIF1-201ENST00000372409 AAMPQ13685 434 aa21.37■■□□□ 1.01
PCIF1-201ENST00000372409 PDZRN3Q9UPQ7 1066 aa21.37■■□□□ 1.01
PCIF1-201ENST00000372409 USP19O94966 1318 aa21.37■■□□□ 1.01
PCIF1-201ENST00000372409 ABCC11Q96J66 1382 aa21.37■■□□□ 1.01
PCIF1-201ENST00000372409 ZKSCAN2Q63HK3 967 aa21.36■■□□□ 1.01
PCIF1-201ENST00000372409 RWDD1Q9H446 243 aaPredicted RBP21.36■■□□□ 1.01
PCIF1-201ENST00000372409 TERF2IPQ9NYB0 399 aa21.36■■□□□ 1.01
PCIF1-201ENST00000372409 SMC4Q9NTJ3 1288 aa21.35■■□□□ 1.01
PCIF1-201ENST00000372409 EXOSC9Q06265 439 aaKnown RBP21.35■■□□□ 1.01
PCIF1-201ENST00000372409 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
PCIF1-201ENST00000372409 TMPOP42166 694 aaKnown RBP21.35■■□□□ 1.01
PCIF1-201ENST00000372409 GSE1Q14687 1217 aa21.35■■□□□ 1.01
PCIF1-201ENST00000372409 YEATS2Q9ULM3 1422 aa21.34■■□□□ 1.01
PCIF1-201ENST00000372409 MYO5BQ9ULV0 1848 aa21.34■■□□□ 1.01
PCIF1-201ENST00000372409 DZIP1LQ8IYY4 767 aaKnown RBP21.34■■□□□ 1.01
PCIF1-201ENST00000372409 ARHGAP31Q2M1Z3 1444 aa21.34■■□□□ 1.01
PCIF1-201ENST00000372409 FYB1O15117 783 aa21.34■■□□□ 1.01
PCIF1-201ENST00000372409 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1.01
PCIF1-201ENST00000372409 PLEKHF1Q96S99 279 aa21.32■■□□□ 1
PCIF1-201ENST00000372409 ADGRB2O60241 1585 aa21.32■■□□□ 1
PCIF1-201ENST00000372409 ATAD2Q6PL18 1390 aa21.32■■□□□ 1
PCIF1-201ENST00000372409 STAG3Q9UJ98 1225 aa21.32■■□□□ 1
PCIF1-201ENST00000372409 NCBP3Q53F19 620 aaKnown RBP21.31■■□□□ 1
PCIF1-201ENST00000372409 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
PCIF1-201ENST00000372409 IL27Q8NEV9 243 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 985 ms