RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
VEGFA-205ENST00000372067 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
VEGFA-205ENST00000372067 SKAP1Q86WV1 359 aa22.13■■□□□ 1.13
VEGFA-205ENST00000372067 MROH1Q8NDA8 1641 aa22.12■■□□□ 1.13
VEGFA-205ENST00000372067 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
VEGFA-205ENST00000372067 ABCA6Q8N139 1617 aa22.11■■□□□ 1.13
VEGFA-205ENST00000372067 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
VEGFA-205ENST00000372067 ABCC3O15438 1527 aa22.11■■□□□ 1.13
VEGFA-205ENST00000372067 RGS3P49796 1198 aa22.1■■□□□ 1.13
VEGFA-205ENST00000372067 BCL2L13Q9BXK5 485 aa22.1■■□□□ 1.13
VEGFA-205ENST00000372067 TCP11L2Q8N4U5 519 aa22.1■■□□□ 1.13
VEGFA-205ENST00000372067 E9PSI1 815 aa22.09■■□□□ 1.13
VEGFA-205ENST00000372067 BCAR3O75815 825 aa22.09■■□□□ 1.13
VEGFA-205ENST00000372067 NEFMP07197 916 aa22.09■■□□□ 1.13
VEGFA-205ENST00000372067 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
VEGFA-205ENST00000372067 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-205ENST00000372067 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
VEGFA-205ENST00000372067 SLFN5Q08AF3 891 aa22.09■■□□□ 1.13
VEGFA-205ENST00000372067 MAPK8IP3Q9UPT6 1336 aa22.08■■□□□ 1.13
VEGFA-205ENST00000372067 KDM5AP29375 1690 aaKnown RBP22.08■■□□□ 1.12
VEGFA-205ENST00000372067 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
VEGFA-205ENST00000372067 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-205ENST00000372067 IQGAP1P46940 1657 aa22.07■■□□□ 1.12
VEGFA-205ENST00000372067 CDK19Q9BWU1 502 aa22.07■■□□□ 1.12
VEGFA-205ENST00000372067 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
VEGFA-205ENST00000372067 SYNMO15061 1565 aa22.06■■□□□ 1.12
VEGFA-205ENST00000372067 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
VEGFA-205ENST00000372067 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
VEGFA-205ENST00000372067 FRMPD1Q5SYB0 1578 aa22.05■■□□□ 1.12
VEGFA-205ENST00000372067 IPO9Q96P70 1041 aaKnown RBP22.04■■□□□ 1.12
VEGFA-205ENST00000372067 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
VEGFA-205ENST00000372067 VSIG10Q8N0Z9 540 aa22.03■■□□□ 1.12
VEGFA-205ENST00000372067 MROH2AA6NES4 1674 aa22.03■■□□□ 1.12
VEGFA-205ENST00000372067 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-205ENST00000372067 CLUAP1Q96AJ1 413 aa22.03■■□□□ 1.12
VEGFA-205ENST00000372067 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
VEGFA-205ENST00000372067 LMTK2Q8IWU2 1503 aa22.03■■□□□ 1.12
VEGFA-205ENST00000372067 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.12
VEGFA-205ENST00000372067 TXNDC2Q86VQ3 553 aa22.02■■□□□ 1.12
VEGFA-205ENST00000372067 ADGRB3O60242 1522 aa22.02■■□□□ 1.12
VEGFA-205ENST00000372067 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
VEGFA-205ENST00000372067 WWC1Q8IX03 1113 aa22.02■■□□□ 1.12
VEGFA-205ENST00000372067 SOX12O15370 315 aa22.01■■□□□ 1.11
VEGFA-205ENST00000372067 COG6Q9Y2V7 657 aa22■■□□□ 1.11
VEGFA-205ENST00000372067 ZMYM4Q5VZL5 1548 aa22■■□□□ 1.11
VEGFA-205ENST00000372067 FBLN1P23142 703 aa21.99■■□□□ 1.11
VEGFA-205ENST00000372067 DIP2CQ9Y2E4 1556 aa21.98■■□□□ 1.11
VEGFA-205ENST00000372067 PDE4AP27815 886 aa21.98■■□□□ 1.11
VEGFA-205ENST00000372067 SBNO2Q9Y2G9 1366 aa21.98■■□□□ 1.11
VEGFA-205ENST00000372067 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-205ENST00000372067 PANK1Q8TE04 598 aa21.98■■□□□ 1.11
VEGFA-205ENST00000372067 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
VEGFA-205ENST00000372067 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
VEGFA-205ENST00000372067 MYH16Q9H6N6 1097 aa21.93■■□□□ 1.1
VEGFA-205ENST00000372067 CAMSAP1Q5T5Y3 1602 aa21.93■■□□□ 1.1
VEGFA-205ENST00000372067 DIAPH1O60610 1272 aaKnown RBP21.93■■□□□ 1.1
VEGFA-205ENST00000372067 A0A1W2PP64 1363 aa21.93■■□□□ 1.1
VEGFA-205ENST00000372067 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
VEGFA-205ENST00000372067 ATAD2Q6PL18 1390 aa21.93■■□□□ 1.1
VEGFA-205ENST00000372067 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
VEGFA-205ENST00000372067 TSR2Q969E8 191 aaKnown RBP21.92■■□□□ 1.1
VEGFA-205ENST00000372067 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
VEGFA-205ENST00000372067 CEBPAP49715 358 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-205ENST00000372067 FYB1O15117 783 aa21.91■■□□□ 1.1
VEGFA-205ENST00000372067 YTHDC2Q9H6S0 1430 aaKnown RBP21.91■■□□□ 1.1
VEGFA-205ENST00000372067 NGEFQ8N5V2 710 aa21.91■■□□□ 1.1
VEGFA-205ENST00000372067 INSRP06213 1382 aa21.9■■□□□ 1.1
VEGFA-205ENST00000372067 HMOX1P09601 288 aa21.9■■□□□ 1.1
VEGFA-205ENST00000372067 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
VEGFA-205ENST00000372067 CENPQQ7L2Z9 268 aaPredicted RBP21.9■■□□□ 1.1
VEGFA-205ENST00000372067 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
VEGFA-205ENST00000372067 RIPK4P57078 832 aa21.89■■□□□ 1.09
VEGFA-205ENST00000372067 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.89■■□□□ 1.09
VEGFA-205ENST00000372067 NKTRP30414 1462 aaKnown RBP21.89■■□□□ 1.09
VEGFA-205ENST00000372067 ZNF521Q96K83 1311 aa21.89■■□□□ 1.09
VEGFA-205ENST00000372067 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
VEGFA-205ENST00000372067 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
VEGFA-205ENST00000372067 ARHGAP31Q2M1Z3 1444 aa21.87■■□□□ 1.09
VEGFA-205ENST00000372067 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
VEGFA-205ENST00000372067 NCKAP5LQ9HCH0 1330 aa21.86■■□□□ 1.09
VEGFA-205ENST00000372067 GLI2P10070 1586 aa21.86■■□□□ 1.09
VEGFA-205ENST00000372067 QRICH2Q9H0J4 1663 aa21.86■■□□□ 1.09
VEGFA-205ENST00000372067 ADGRB1O14514 1584 aa21.84■■□□□ 1.09
VEGFA-205ENST00000372067 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
VEGFA-205ENST00000372067 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
VEGFA-205ENST00000372067 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
VEGFA-205ENST00000372067 SETBP1Q9Y6X0 1596 aa21.83■■□□□ 1.09
VEGFA-205ENST00000372067 NME9Q86XW9 330 aa21.83■■□□□ 1.09
VEGFA-205ENST00000372067 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
VEGFA-205ENST00000372067 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.08
VEGFA-205ENST00000372067 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.08
VEGFA-205ENST00000372067 PUS7Q96PZ0 661 aaKnown RBP21.83■■□□□ 1.08
VEGFA-205ENST00000372067 MYOM1P52179 1685 aa21.83■■□□□ 1.08
VEGFA-205ENST00000372067 PPLO60437 1756 aa21.82■■□□□ 1.08
VEGFA-205ENST00000372067 EXOSC9Q06265 439 aaKnown RBP21.82■■□□□ 1.08
VEGFA-205ENST00000372067 COG3Q96JB2 828 aa21.82■■□□□ 1.08
VEGFA-205ENST00000372067 ZRANB1Q9UGI0 708 aa21.82■■□□□ 1.08
VEGFA-205ENST00000372067 ELL2O00472 640 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-205ENST00000372067 PRKAR2BP31323 418 aa21.82■■□□□ 1.08
VEGFA-205ENST00000372067 WDR63Q8IWG1 891 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms