RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
SNCG-202ENST00000372017 SIRT1Q96EB6 747 aa18.14■□□□□ 0.49
SNCG-202ENST00000372017 SLAIN2Q9P270 581 aa18.14■□□□□ 0.49
SNCG-202ENST00000372017 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
SNCG-202ENST00000372017 TONSLQ96HA7 1378 aa18.14■□□□□ 0.49
SNCG-202ENST00000372017 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
SNCG-202ENST00000372017 DCCP43146 1447 aa18.13■□□□□ 0.49
SNCG-202ENST00000372017 MST1RQ04912 1400 aa18.13■□□□□ 0.49
SNCG-202ENST00000372017 ATF3P18847 181 aa18.12■□□□□ 0.49
SNCG-202ENST00000372017 CADPS2Q86UW7 1296 aa18.11■□□□□ 0.49
SNCG-202ENST00000372017 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
SNCG-202ENST00000372017 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
SNCG-202ENST00000372017 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
SNCG-202ENST00000372017 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.49
SNCG-202ENST00000372017 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
SNCG-202ENST00000372017 C1orf167Q5SNV9 1468 aa18.06■□□□□ 0.48
SNCG-202ENST00000372017 RGPD8O14715 1765 aaPredicted RBP18.05■□□□□ 0.48
SNCG-202ENST00000372017 BRINP3Q76B58 766 aa18.05■□□□□ 0.48
SNCG-202ENST00000372017 POGKQ9P215 609 aa18.05■□□□□ 0.48
SNCG-202ENST00000372017 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
SNCG-202ENST00000372017 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
SNCG-202ENST00000372017 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
SNCG-202ENST00000372017 RALGAPBQ86X10 1494 aa18.03■□□□□ 0.48
SNCG-202ENST00000372017 ORAI2Q96SN7 254 aa18.03■□□□□ 0.48
SNCG-202ENST00000372017 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
SNCG-202ENST00000372017 ROCK2O75116 1388 aaKnown RBP18.03■□□□□ 0.48
SNCG-202ENST00000372017 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
SNCG-202ENST00000372017 USP32Q8NFA0 1604 aa18.02■□□□□ 0.48
SNCG-202ENST00000372017 PHLPP1O60346 1717 aa18.02■□□□□ 0.48
SNCG-202ENST00000372017 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
SNCG-202ENST00000372017 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
SNCG-202ENST00000372017 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
SNCG-202ENST00000372017 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
SNCG-202ENST00000372017 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
SNCG-202ENST00000372017 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
SNCG-202ENST00000372017 PRR36Q9H6K5 1346 aa17.97■□□□□ 0.47
SNCG-202ENST00000372017 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
SNCG-202ENST00000372017 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.47
SNCG-202ENST00000372017 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
SNCG-202ENST00000372017 CENPJQ9HC77 1338 aaPredicted RBP17.96■□□□□ 0.46
SNCG-202ENST00000372017 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
SNCG-202ENST00000372017 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
SNCG-202ENST00000372017 CDK19Q9BWU1 502 aa17.93■□□□□ 0.46
SNCG-202ENST00000372017 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
SNCG-202ENST00000372017 ATP7BP35670 1465 aa17.91■□□□□ 0.46
SNCG-202ENST00000372017 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
SNCG-202ENST00000372017 PXDNQ92626 1479 aa17.9■□□□□ 0.46
SNCG-202ENST00000372017 FOXO3O43524 673 aa17.9■□□□□ 0.46
SNCG-202ENST00000372017 SOS2Q07890 1332 aaPredicted RBP17.9■□□□□ 0.46
SNCG-202ENST00000372017 XPCQ01831 940 aaPredicted RBP17.89■□□□□ 0.45
SNCG-202ENST00000372017 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.45
SNCG-202ENST00000372017 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
SNCG-202ENST00000372017 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.45
SNCG-202ENST00000372017 TOPAZ1Q8N9V7 1692 aa17.89■□□□□ 0.45
SNCG-202ENST00000372017 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
SNCG-202ENST00000372017 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
SNCG-202ENST00000372017 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
SNCG-202ENST00000372017 EIF3AQ14152 1382 aaKnown RBP17.87■□□□□ 0.45
SNCG-202ENST00000372017 JCADQ9P266 1359 aa17.86■□□□□ 0.45
SNCG-202ENST00000372017 ITSN1Q15811 1721 aa17.86■□□□□ 0.45
SNCG-202ENST00000372017 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
SNCG-202ENST00000372017 ST20-MTHFSA0A0A6YYL1 179 aa17.84■□□□□ 0.45
SNCG-202ENST00000372017 TESK2Q96S53 571 aa17.84■□□□□ 0.45
SNCG-202ENST00000372017 USP47Q96K76 1375 aa17.83■□□□□ 0.45
SNCG-202ENST00000372017 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
SNCG-202ENST00000372017 SRPK2P78362 688 aaKnown RBP17.83■□□□□ 0.44
SNCG-202ENST00000372017 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
SNCG-202ENST00000372017 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.44
SNCG-202ENST00000372017 TRPM3Q9HCF6 1732 aaPredicted RBP17.83■□□□□ 0.44
SNCG-202ENST00000372017 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
SNCG-202ENST00000372017 LRP6O75581 1613 aa17.82■□□□□ 0.44
SNCG-202ENST00000372017 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
SNCG-202ENST00000372017 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
SNCG-202ENST00000372017 PPIP5K1Q6PFW1 1433 aa17.8■□□□□ 0.44
SNCG-202ENST00000372017 PLEKHG3A1L390 1219 aa17.79■□□□□ 0.44
SNCG-202ENST00000372017 COL22A1Q8NFW1 1626 aaPredicted RBP17.79■□□□□ 0.44
SNCG-202ENST00000372017 ACEP12821 1306 aa17.78■□□□□ 0.44
SNCG-202ENST00000372017 SPATA31A3Q5VYP0 1347 aa17.78■□□□□ 0.44
SNCG-202ENST00000372017 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
SNCG-202ENST00000372017 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
SNCG-202ENST00000372017 PSME1Q06323 249 aa17.77■□□□□ 0.44
SNCG-202ENST00000372017 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
SNCG-202ENST00000372017 CABP1Q9NZU7 370 aa17.77■□□□□ 0.44
SNCG-202ENST00000372017 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
SNCG-202ENST00000372017 MEX3CQ5U5Q3 659 aaKnown RBP17.76■□□□□ 0.43
SNCG-202ENST00000372017 NUTM2BA6NNL0 878 aaPredicted RBP17.75■□□□□ 0.43
SNCG-202ENST00000372017 NUTM2EB1AL46 878 aaPredicted RBP17.75■□□□□ 0.43
SNCG-202ENST00000372017 NUTM2AQ8IVF1 878 aaPredicted RBP17.75■□□□□ 0.43
SNCG-202ENST00000372017 SBNO1A3KN83 1393 aa17.75■□□□□ 0.43
SNCG-202ENST00000372017 TNS3Q68CZ2 1445 aa17.74■□□□□ 0.43
SNCG-202ENST00000372017 AKAP12Q02952 1782 aa17.73■□□□□ 0.43
SNCG-202ENST00000372017 ABCA3Q99758 1704 aa17.72■□□□□ 0.43
SNCG-202ENST00000372017 CD163L1Q9NR16 1453 aa17.71■□□□□ 0.43
SNCG-202ENST00000372017 ATAD2Q6PL18 1390 aa17.71■□□□□ 0.43
SNCG-202ENST00000372017 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
SNCG-202ENST00000372017 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.43
SNCG-202ENST00000372017 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
SNCG-202ENST00000372017 SSH2Q76I76 1423 aa17.7■□□□□ 0.42
SNCG-202ENST00000372017 SLC12A5Q9H2X9 1139 aa17.69■□□□□ 0.42
SNCG-202ENST00000372017 CPSF1Q10570 1443 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms