RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 SF3A1Q15459 793 aaKnown RBP16.54■□□□□ 0.24
PREX1-201ENST00000371941 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
PREX1-201ENST00000371941 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
PREX1-201ENST00000371941 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
PREX1-201ENST00000371941 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
PREX1-201ENST00000371941 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
PREX1-201ENST00000371941 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
PREX1-201ENST00000371941 CDK19Q9BWU1 502 aa16.52■□□□□ 0.24
PREX1-201ENST00000371941 IFIT2P09913 472 aaKnown RBP16.52■□□□□ 0.24
PREX1-201ENST00000371941 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
PREX1-201ENST00000371941 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
PREX1-201ENST00000371941 GNAI1P63096 354 aa16.51■□□□□ 0.23
PREX1-201ENST00000371941 DCTN1Q14203 1278 aa16.51■□□□□ 0.23
PREX1-201ENST00000371941 API5Q9BZZ5 524 aaKnown RBP16.51■□□□□ 0.23
PREX1-201ENST00000371941 FAM13BQ9NYF5 915 aa16.5■□□□□ 0.23
PREX1-201ENST00000371941 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
PREX1-201ENST00000371941 TRAK2O60296 914 aa16.5■□□□□ 0.23
PREX1-201ENST00000371941 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
PREX1-201ENST00000371941 PES1O00541 588 aaKnown RBP16.5■□□□□ 0.23
PREX1-201ENST00000371941 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
PREX1-201ENST00000371941 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
PREX1-201ENST00000371941 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
PREX1-201ENST00000371941 EVA1CP58658 441 aa16.49■□□□□ 0.23
PREX1-201ENST00000371941 NLRP6P59044 892 aa16.49■□□□□ 0.23
PREX1-201ENST00000371941 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
PREX1-201ENST00000371941 FBLN1P23142 703 aa16.49■□□□□ 0.23
PREX1-201ENST00000371941 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
PREX1-201ENST00000371941 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
PREX1-201ENST00000371941 REC8O95072 547 aa16.48■□□□□ 0.23
PREX1-201ENST00000371941 APPP05067 770 aa16.48■□□□□ 0.23
PREX1-201ENST00000371941 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
PREX1-201ENST00000371941 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
PREX1-201ENST00000371941 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
PREX1-201ENST00000371941 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.23
PREX1-201ENST00000371941 PHF14O94880 888 aa16.46■□□□□ 0.23
PREX1-201ENST00000371941 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
PREX1-201ENST00000371941 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
PREX1-201ENST00000371941 CCAR2Q8N163 923 aaKnown RBP16.46■□□□□ 0.23
PREX1-201ENST00000371941 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.22
PREX1-201ENST00000371941 SLC4A2P04920 1241 aa16.46■□□□□ 0.22
PREX1-201ENST00000371941 ABCC5O15440 1437 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
PREX1-201ENST00000371941 XPCQ01831 940 aaPredicted RBP16.45■□□□□ 0.22
PREX1-201ENST00000371941 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 CDC45O75419 566 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 ANKRD30BQ9BXX2 1392 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
PREX1-201ENST00000371941 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
PREX1-201ENST00000371941 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
PREX1-201ENST00000371941 NEK4P51957 841 aa16.44■□□□□ 0.22
PREX1-201ENST00000371941 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
PREX1-201ENST00000371941 SKOR2Q2VWA4 1001 aaPredicted RBP16.44■□□□□ 0.22
PREX1-201ENST00000371941 SIL1Q9H173 461 aa16.44■□□□□ 0.22
PREX1-201ENST00000371941 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
PREX1-201ENST00000371941 UBTFL1P0CB47 393 aaPredicted RBP16.44■□□□□ 0.22
PREX1-201ENST00000371941 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
PREX1-201ENST00000371941 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
PREX1-201ENST00000371941 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
PREX1-201ENST00000371941 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
PREX1-201ENST00000371941 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
PREX1-201ENST00000371941 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
PREX1-201ENST00000371941 SLFN5Q08AF3 891 aa16.43■□□□□ 0.22
PREX1-201ENST00000371941 MAPKBP1O60336 1514 aa16.43■□□□□ 0.22
PREX1-201ENST00000371941 RAD21O60216 631 aa16.43■□□□□ 0.22
PREX1-201ENST00000371941 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
PREX1-201ENST00000371941 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
PREX1-201ENST00000371941 SLC26A8Q96RN1 970 aa16.42■□□□□ 0.22
PREX1-201ENST00000371941 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
PREX1-201ENST00000371941 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
PREX1-201ENST00000371941 FYB1O15117 783 aa16.42■□□□□ 0.22
PREX1-201ENST00000371941 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
PREX1-201ENST00000371941 R3HCC1Q9Y3T6 440 aaKnown RBP16.42■□□□□ 0.22
PREX1-201ENST00000371941 TPM4P67936 248 aa16.41■□□□□ 0.22
PREX1-201ENST00000371941 BECN2A8MW95 431 aa16.41■□□□□ 0.22
PREX1-201ENST00000371941 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
PREX1-201ENST00000371941 STK3Q13188 491 aa16.41■□□□□ 0.22
PREX1-201ENST00000371941 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
PREX1-201ENST00000371941 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
PREX1-201ENST00000371941 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
PREX1-201ENST00000371941 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
PREX1-201ENST00000371941 IQGAP2Q13576 1575 aa16.4■□□□□ 0.22
PREX1-201ENST00000371941 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
PREX1-201ENST00000371941 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
PREX1-201ENST00000371941 DISP3Q9P2K9 1392 aa16.4■□□□□ 0.22
PREX1-201ENST00000371941 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
PREX1-201ENST00000371941 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
PREX1-201ENST00000371941 MCM10Q7L590 875 aa16.39■□□□□ 0.21
PREX1-201ENST00000371941 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
PREX1-201ENST00000371941 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
PREX1-201ENST00000371941 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
PREX1-201ENST00000371941 MYL6BP14649 208 aa16.38■□□□□ 0.21
PREX1-201ENST00000371941 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
PREX1-201ENST00000371941 ADGRF5Q8IZF2 1346 aa16.38■□□□□ 0.21
PREX1-201ENST00000371941 LARP6Q9BRS8 491 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms