RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 HSP90AB4PQ58FF6 505 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
NDC1-201ENST00000371429 CHAF1AQ13111 956 aaPredicted RBP18.11■□□□□ 0.49
NDC1-201ENST00000371429 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
NDC1-201ENST00000371429 CSPP1Q1MSJ5 1256 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 ERBINQ96RT1 1412 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 EPRSP07814 1512 aaKnown RBP18.11■□□□□ 0.49
NDC1-201ENST00000371429 DAPK1P53355 1430 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
NDC1-201ENST00000371429 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
NDC1-201ENST00000371429 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
NDC1-201ENST00000371429 IQGAP2Q13576 1575 aa18.1■□□□□ 0.49
NDC1-201ENST00000371429 CPLX2Q6PUV4 134 aaKnown RBP18.09■□□□□ 0.49
NDC1-201ENST00000371429 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
NDC1-201ENST00000371429 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
NDC1-201ENST00000371429 FAM184AQ8NB25 1140 aa18.09■□□□□ 0.49
NDC1-201ENST00000371429 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
NDC1-201ENST00000371429 PPP2R1AP30153 589 aa18.08■□□□□ 0.49
NDC1-201ENST00000371429 MAGI1Q96QZ7 1491 aaPredicted RBP18.08■□□□□ 0.49
NDC1-201ENST00000371429 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
NDC1-201ENST00000371429 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
NDC1-201ENST00000371429 NEUROD6Q96NK8 337 aa18.08■□□□□ 0.48
NDC1-201ENST00000371429 H3BQV1 296 aa18.08■□□□□ 0.48
NDC1-201ENST00000371429 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.48
NDC1-201ENST00000371429 IFFO2Q5TF58 517 aa18.08■□□□□ 0.48
NDC1-201ENST00000371429 SULT6B1Q6IMI4 303 aa18.08■□□□□ 0.48
NDC1-201ENST00000371429 TPM4P67936 248 aa18.07■□□□□ 0.48
NDC1-201ENST00000371429 KIAA2012Q0VF49 1180 aa18.07■□□□□ 0.48
NDC1-201ENST00000371429 SF3B2Q13435 895 aaKnown RBP18.07■□□□□ 0.48
NDC1-201ENST00000371429 CTDP1Q9Y5B0 961 aaPredicted RBP18.07■□□□□ 0.48
NDC1-201ENST00000371429 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
NDC1-201ENST00000371429 FAM177BA6PVY3 158 aa18.07■□□□□ 0.48
NDC1-201ENST00000371429 CCDC30Q5VVM6 783 aa18.07■□□□□ 0.48
NDC1-201ENST00000371429 REC8O95072 547 aa18.07■□□□□ 0.48
NDC1-201ENST00000371429 MSNP26038 577 aaKnown RBP18.07■□□□□ 0.48
NDC1-201ENST00000371429 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
NDC1-201ENST00000371429 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
NDC1-201ENST00000371429 NBPF8Q3BBV2 869 aa18.06■□□□□ 0.48
NDC1-201ENST00000371429 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
NDC1-201ENST00000371429 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
NDC1-201ENST00000371429 TRDNQ13061 729 aa18.05■□□□□ 0.48
NDC1-201ENST00000371429 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
NDC1-201ENST00000371429 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
NDC1-201ENST00000371429 FOXD4L4Q8WXT5 416 aaPredicted RBP18.05■□□□□ 0.48
NDC1-201ENST00000371429 ZNF530Q6P9A1 599 aaPredicted RBP18.05■□□□□ 0.48
NDC1-201ENST00000371429 NAP1L5Q96NT1 182 aaPredicted RBP18.04■□□□□ 0.48
NDC1-201ENST00000371429 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
NDC1-201ENST00000371429 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 CCDC141Q6ZP82 1450 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 ERC2O15083 957 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
NDC1-201ENST00000371429 CABP4P57796 275 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
NDC1-201ENST00000371429 CREBRFQ8IUR6 639 aa18.02■□□□□ 0.48
NDC1-201ENST00000371429 ATAD2Q6PL18 1390 aa18.02■□□□□ 0.48
NDC1-201ENST00000371429 RNF20Q5VTR2 975 aa18.02■□□□□ 0.47
NDC1-201ENST00000371429 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
NDC1-201ENST00000371429 CPLX1O14810 134 aa18.01■□□□□ 0.47
NDC1-201ENST00000371429 ZC3H6P61129 1189 aaKnown RBP18.01■□□□□ 0.47
NDC1-201ENST00000371429 GNAI3P08754 354 aa18.01■□□□□ 0.47
NDC1-201ENST00000371429 NUDT16Q96DE0 195 aaKnown RBP18.01■□□□□ 0.47
NDC1-201ENST00000371429 SUPT6HQ7KZ85 1726 aaKnown RBP18■□□□□ 0.47
NDC1-201ENST00000371429 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
NDC1-201ENST00000371429 IPO9Q96P70 1041 aaKnown RBP18■□□□□ 0.47
NDC1-201ENST00000371429 LNPKQ9C0E8 428 aa18■□□□□ 0.47
NDC1-201ENST00000371429 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
NDC1-201ENST00000371429 PANK1Q8TE04 598 aa18■□□□□ 0.47
NDC1-201ENST00000371429 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
NDC1-201ENST00000371429 HDGFL1Q5TGJ6 251 aa17.99■□□□□ 0.47
NDC1-201ENST00000371429 MCTP1Q6DN14 999 aa17.99■□□□□ 0.47
NDC1-201ENST00000371429 PDE4AP27815 886 aa17.99■□□□□ 0.47
NDC1-201ENST00000371429 ATP6V1DQ9Y5K8 247 aa17.99■□□□□ 0.47
NDC1-201ENST00000371429 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
NDC1-201ENST00000371429 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
NDC1-201ENST00000371429 TRIM29Q14134 588 aa17.98■□□□□ 0.47
NDC1-201ENST00000371429 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
NDC1-201ENST00000371429 TCEAL9Q9UHQ7 104 aa17.98■□□□□ 0.47
NDC1-201ENST00000371429 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
NDC1-201ENST00000371429 RRS1Q15050 365 aaKnown RBP17.97■□□□□ 0.47
NDC1-201ENST00000371429 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
NDC1-201ENST00000371429 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
NDC1-201ENST00000371429 PPP1R1BQ9UD71 204 aaPredicted RBP17.97■□□□□ 0.47
NDC1-201ENST00000371429 ERICH2A1L162 156 aa17.97■□□□□ 0.47
NDC1-201ENST00000371429 FBXO31Q5XUX0 539 aaPredicted RBP17.96■□□□□ 0.47
NDC1-201ENST00000371429 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
NDC1-201ENST00000371429 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
NDC1-201ENST00000371429 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
NDC1-201ENST00000371429 SURF6O75683 361 aaKnown RBP17.96■□□□□ 0.47
NDC1-201ENST00000371429 AAMPQ13685 434 aa17.95■□□□□ 0.46
NDC1-201ENST00000371429 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
NDC1-201ENST00000371429 KCNH5Q8NCM2 988 aa17.95■□□□□ 0.46
NDC1-201ENST00000371429 FOXD4L6Q3SYB3 417 aaPredicted RBP17.94■□□□□ 0.46
NDC1-201ENST00000371429 FOXD4L3Q6VB84 417 aaPredicted RBP17.94■□□□□ 0.46
NDC1-201ENST00000371429 FYB1O15117 783 aa17.94■□□□□ 0.46
NDC1-201ENST00000371429 INTS3Q68E01 1043 aaKnown RBP17.94■□□□□ 0.46
NDC1-201ENST00000371429 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms