RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
LRRC42-202ENST00000371368 YTHDC2Q9H6S0 1430 aaKnown RBP25.12■■□□□ 1.61
LRRC42-202ENST00000371368 MYOM2P54296 1465 aa25.11■■□□□ 1.61
LRRC42-202ENST00000371368 NUTM2BA6NNL0 878 aaPredicted RBP25.11■■□□□ 1.61
LRRC42-202ENST00000371368 NUTM2EB1AL46 878 aaPredicted RBP25.11■■□□□ 1.61
LRRC42-202ENST00000371368 NUTM2AQ8IVF1 878 aaPredicted RBP25.11■■□□□ 1.61
LRRC42-202ENST00000371368 SIRT1Q96EB6 747 aa25.09■■□□□ 1.61
LRRC42-202ENST00000371368 PLEKHH1Q9ULM0 1364 aa25.08■■□□□ 1.61
LRRC42-202ENST00000371368 CDC42BPGQ6DT37 1551 aa25.08■■□□□ 1.61
LRRC42-202ENST00000371368 KNDC1Q76NI1 1749 aa25.08■■□□□ 1.61
LRRC42-202ENST00000371368 DHX57Q6P158 1386 aaKnown RBP25.07■■□□□ 1.6
LRRC42-202ENST00000371368 ESCO1Q5FWF5 840 aa25.06■■□□□ 1.6
LRRC42-202ENST00000371368 SOS2Q07890 1332 aaPredicted RBP25.06■■□□□ 1.6
LRRC42-202ENST00000371368 LAMC1P11047 1609 aa25.05■■□□□ 1.6
LRRC42-202ENST00000371368 KDM2AQ9Y2K7 1162 aa25.05■■□□□ 1.6
LRRC42-202ENST00000371368 PNPLA6Q8IY17 1366 aa25.05■■□□□ 1.6
LRRC42-202ENST00000371368 DCAF11Q8TEB1 546 aa25.04■■□□□ 1.6
LRRC42-202ENST00000371368 NUTM2FA1L443 756 aa25.03■■□□□ 1.6
LRRC42-202ENST00000371368 ZNF772Q68DY9 489 aaPredicted RBP25.03■■□□□ 1.6
LRRC42-202ENST00000371368 STAC3Q96MF2 364 aa24.99■■□□□ 1.59
LRRC42-202ENST00000371368 NPHP3Q7Z494 1330 aa24.98■■□□□ 1.59
LRRC42-202ENST00000371368 FOXO3O43524 673 aa24.98■■□□□ 1.59
LRRC42-202ENST00000371368 PRAM1Q96QH2 718 aa24.98■■□□□ 1.59
LRRC42-202ENST00000371368 SAFB2Q14151 953 aaKnown RBP eCLIP24.96■■□□□ 1.59
LRRC42-202ENST00000371368 POGKQ9P215 609 aa24.96■■□□□ 1.59
LRRC42-202ENST00000371368 FMN2Q9NZ56 1722 aa24.95■■□□□ 1.59
LRRC42-202ENST00000371368 AFF2P51816 1311 aa24.95■■□□□ 1.58
LRRC42-202ENST00000371368 ADGRB1O14514 1584 aa24.93■■□□□ 1.58
LRRC42-202ENST00000371368 DLC1Q96QB1 1528 aa24.93■■□□□ 1.58
LRRC42-202ENST00000371368 ADAMTS2O95450 1211 aa24.93■■□□□ 1.58
LRRC42-202ENST00000371368 XPCQ01831 940 aaPredicted RBP24.93■■□□□ 1.58
LRRC42-202ENST00000371368 C8orf37Q96NL8 207 aa24.93■■□□□ 1.58
LRRC42-202ENST00000371368 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
LRRC42-202ENST00000371368 PXDNQ92626 1479 aa24.92■■□□□ 1.58
LRRC42-202ENST00000371368 RXRBP28702 533 aa24.9■■□□□ 1.58
LRRC42-202ENST00000371368 NGLY1Q96IV0 654 aa24.9■■□□□ 1.58
LRRC42-202ENST00000371368 QTRT2Q9H974 415 aaKnown RBP24.87■■□□□ 1.57
LRRC42-202ENST00000371368 PHF8Q9UPP1 1060 aa24.87■■□□□ 1.57
LRRC42-202ENST00000371368 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
LRRC42-202ENST00000371368 KRT28Q7Z3Y7 464 aa24.86■■□□□ 1.57
LRRC42-202ENST00000371368 KIF1AQ12756 1690 aa24.85■■□□□ 1.57
LRRC42-202ENST00000371368 RGPD8O14715 1765 aaPredicted RBP24.85■■□□□ 1.57
LRRC42-202ENST00000371368 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
LRRC42-202ENST00000371368 MINK1Q8N4C8 1332 aaPredicted RBP24.84■■□□□ 1.57
LRRC42-202ENST00000371368 SPATA31A3Q5VYP0 1347 aa24.83■■□□□ 1.56
LRRC42-202ENST00000371368 PSME1Q06323 249 aa24.81■■□□□ 1.56
LRRC42-202ENST00000371368 ADGRB2O60241 1585 aa24.8■■□□□ 1.56
LRRC42-202ENST00000371368 RBM6P78332 1123 aaKnown RBP24.8■■□□□ 1.56
LRRC42-202ENST00000371368 ANKARQ7Z5J8 1434 aa24.79■■□□□ 1.56
LRRC42-202ENST00000371368 FNBP4Q8N3X1 1017 aaPredicted RBP24.79■■□□□ 1.56
LRRC42-202ENST00000371368 PMFBP1Q8TBY8 1022 aa24.79■■□□□ 1.56
LRRC42-202ENST00000371368 USP21Q9UK80 565 aa24.79■■□□□ 1.56
LRRC42-202ENST00000371368 CDK12Q9NYV4 1490 aaPredicted RBP24.78■■□□□ 1.56
LRRC42-202ENST00000371368 WASLO00401 505 aaPredicted RBP24.78■■□□□ 1.56
LRRC42-202ENST00000371368 USP32Q8NFA0 1604 aa24.78■■□□□ 1.56
LRRC42-202ENST00000371368 EIF3AQ14152 1382 aaKnown RBP24.75■■□□□ 1.55
LRRC42-202ENST00000371368 TRPC5Q9UL62 973 aaPredicted RBP24.74■■□□□ 1.55
LRRC42-202ENST00000371368 PRR36Q9H6K5 1346 aa24.74■■□□□ 1.55
LRRC42-202ENST00000371368 ARHGEF28Q8N1W1 1705 aaKnown RBP24.73■■□□□ 1.55
LRRC42-202ENST00000371368 KIAA1210Q9ULL0 1709 aa24.73■■□□□ 1.55
LRRC42-202ENST00000371368 SBNO1A3KN83 1393 aa24.73■■□□□ 1.55
LRRC42-202ENST00000371368 NBPF1Q3BBV0 1214 aa24.73■■□□□ 1.55
LRRC42-202ENST00000371368 TNS3Q68CZ2 1445 aa24.72■■□□□ 1.55
LRRC42-202ENST00000371368 SIN3AQ96ST3 1273 aa24.72■■□□□ 1.55
LRRC42-202ENST00000371368 TULP4Q9NRJ4 1543 aa24.71■■□□□ 1.55
LRRC42-202ENST00000371368 LMOD2Q6P5Q4 547 aa24.71■■□□□ 1.55
LRRC42-202ENST00000371368 L3MBTL2Q969R5 705 aa24.71■■□□□ 1.55
LRRC42-202ENST00000371368 MARF1Q9Y4F3 1742 aaKnown RBP24.71■■□□□ 1.55
LRRC42-202ENST00000371368 UPF1Q92900 1129 aaKnown RBP eCLIP24.7■■□□□ 1.54
LRRC42-202ENST00000371368 CABLES1Q8TDN4 633 aa24.69■■□□□ 1.54
LRRC42-202ENST00000371368 RGS12O14924 1447 aa24.69■■□□□ 1.54
LRRC42-202ENST00000371368 PLEKHG5O94827 1062 aa24.68■■□□□ 1.54
LRRC42-202ENST00000371368 HAP1P54257 671 aaPredicted RBP24.68■■□□□ 1.54
LRRC42-202ENST00000371368 NUDT16Q96DE0 195 aaKnown RBP24.68■■□□□ 1.54
LRRC42-202ENST00000371368 BCL9LQ86UU0 1499 aa24.68■■□□□ 1.54
LRRC42-202ENST00000371368 ATRNO75882 1429 aa24.68■■□□□ 1.54
LRRC42-202ENST00000371368 ARHGEF10O15013 1369 aa24.67■■□□□ 1.54
LRRC42-202ENST00000371368 CDK19Q9BWU1 502 aa24.67■■□□□ 1.54
LRRC42-202ENST00000371368 GPRASP1Q5JY77 1395 aa24.67■■□□□ 1.54
LRRC42-202ENST00000371368 NEUROD1Q13562 356 aa24.66■■□□□ 1.54
LRRC42-202ENST00000371368 NGDNQ8NEJ9 315 aaKnown RBP24.66■■□□□ 1.54
LRRC42-202ENST00000371368 TRPM3Q9HCF6 1732 aaPredicted RBP24.62■■□□□ 1.53
LRRC42-202ENST00000371368 UNC5CLQ8IV45 518 aa24.62■■□□□ 1.53
LRRC42-202ENST00000371368 ATP7BP35670 1465 aa24.62■■□□□ 1.53
LRRC42-202ENST00000371368 SLIT2O94813 1529 aa24.61■■□□□ 1.53
LRRC42-202ENST00000371368 GJD4Q96KN9 370 aaPredicted RBP24.61■■□□□ 1.53
LRRC42-202ENST00000371368 PAK3O75914 559 aaPredicted RBP24.59■■□□□ 1.53
LRRC42-202ENST00000371368 CENPJQ9HC77 1338 aaPredicted RBP24.59■■□□□ 1.53
LRRC42-202ENST00000371368 ITSN1Q15811 1721 aa24.58■■□□□ 1.53
LRRC42-202ENST00000371368 CCDC61Q9Y6R9 512 aa24.58■■□□□ 1.53
LRRC42-202ENST00000371368 ALS2Q96Q42 1657 aa24.57■■□□□ 1.52
LRRC42-202ENST00000371368 ABCA3Q99758 1704 aa24.57■■□□□ 1.52
LRRC42-202ENST00000371368 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.56■■□□□ 1.52
LRRC42-202ENST00000371368 FAM83GA6ND36 823 aa24.55■■□□□ 1.52
LRRC42-202ENST00000371368 PLEKHG3A1L390 1219 aa24.54■■□□□ 1.52
LRRC42-202ENST00000371368 ACEP12821 1306 aa24.54■■□□□ 1.52
LRRC42-202ENST00000371368 SRPK2P78362 688 aaKnown RBP24.53■■□□□ 1.52
LRRC42-202ENST00000371368 NBPF8Q3BBV2 869 aa24.53■■□□□ 1.52
LRRC42-202ENST00000371368 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.52
LRRC42-202ENST00000371368 VPS72Q15906 364 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms